col17a1b (col17a1)


Basic Information

Item Value
gene id col17a1b
gene name col17a1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 73647943 ~ 73674938 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611215.2
aagaggcAGGTATAAGGACAAACCACTTCACTACCCTGCAACAGTAACATCAACAACATTCACTACCTGACGGATATCAGTTGGACTATCTTAGTGGATTTTATTTATCTTCTTCAGAAGTTGACTGAAGATTCTCCTATTGACACACACTAAAGATAACATGGGATGGATGATTTAACAACAAGAAAGAGAAACCACTCAGGAGGAAGCTCCGGGGGAAAGGTTGTGACAGAAACTACAACCTCGACAAGTAGATTGGTATCTTTACCTCCAAAGGGTGGCAGTGGATCAAAAAGTAGTACCCACAGGACTATGTCTAGCAATGCTGGAGGCCTGTGGTTGGAAAAGAACATTTTAACCCAGAACAGCAGTGGAACTAACTTTTCCTCATCTTCTGTGGGTGTCAATGCCGGAGGATCCAGCTCCTCATCAGGGTTCTACATGGGGGACTACTCTGAgggtggtggagatggtggagggggaggtggtggagggggaggtggtggaggtgggggaggtggaggaggcggCGGAGGTGTTGGCAGTGGAGGTGGGGGTGGCTCAGGCTATGGAGGAGTGTATGGAGGAAGCCCCGGGTCAAAAGTAAAGAGCAGCTCGTCAGGGTGCTCCAGGAGGGCCCAGAGCTCTGCCTCGCCTGGGGGTCTCTCCCCTGGCTTCCTGGAAAGGAAGAGTATGGCCAGTCGCTCAGGAGGCTACGACGGAAGCTCAAGTGGCAACTCCTCCCCCGAGTTTACACGGAAAGACTATGCAGGGTCAGGTGCCACTAGAATAGGGAGGAGCCAGAGCAGAGAGAGTGAAATCAGAGCCAGACTGCAGAGTGCCTCTCCCAGTGCTGGCAGATGGACTGAGCTGGATGATGTGAAGAGGCTGGTGAAGGGAGGACGCTCCAACAGTGTCAGCCCCACCCGCTCCTCCGCTTCCTCCACCCTGCCTGTCCCCAGGAAGGCCACCGTCGAGGCCAAGATCGTCACCCAGGCCTCCCAGTCAGTCTCTGGGCAGTATGAGACCACTACCCTGGACTCTGGCCTACCTTCTTCCTACTGCTGGACTAGCTCTACGCTGCCCATCTCCTCTGCCACTGGCAACAGCAGCAGCGCATACGGTTACCATAGTAACACAAACAACATGTCTCCAGGCTTGGGGTCCTCCCTGCTCAACACCACCTCACCCTCCTCCTTGTCAGTGTATGGATTCCAGAATAACTTGGCGCCCATGTCCAGTAGTGTCCTCACCACCAGTGGAGTTAACGCACATTCAGGCACTTTGACAGCAGGATATGGAGTGCAGAAGAACATATCGAATGGTGGTGGTCTCGTCAGCACCGGAGTGTCAACCTCTGCAATGTCCGCTTTGAGGTCTCACACTGATGACGCATACAGGAAAGACTTAAAGTACCTTGTGCTGCAGAAGGAGAATGTTCCAGTCAAGAGAGATACTGAGGTGCTCACCCTCACAAAAGACAGTGGAAAACACTTCACTAGCAGTGTTCGCAGTGTTGGGGGTTCACTGTCTGGTGATTCTCTAAAGAAGGAGAAGATGGTGTCCAGCTACAGTGAGACTGCACCAGTCCTTCTGAAGTCTGAGTCCAATTCATACTATGGATCACCCCTAGTGTCAACAAAAGACAAAGCAACATATGCAGAGATCCAAAAAGAGGGGGACTACTACAGCAGCGGAGGACGAGGTGGGGGCTGCTGTGGGTGTGAGGACTCCTGCTGTTCCTGGTGGAAGTGGCTGCTAGGACTGCTCCTGCTCTCCCTGCTGCTCCTGGGCCTGCTCTTTGGGCTCATTGCCCTGGCGGAGGACGTGAGGAATCTGAAGTCTCGAGTGGCAGCTCTGGAGACCACCTCCACCGCTGCTCACGCCAGCCGCCTGTCAGCCTCCAATAACGACATCCACAACCCCCAGTCTGGCACCTACATGGACACTGGGGGCGCGGCCCGCTCCGACAACACCCTGAACCTGGATACCAGCCTGGGCATGGGGATGGGCACTGGCACGGGCACTGGCATCGCCGGGCACACAGACAATGCTGCCCTCCAGAGGACCATCCAGCAACTACTGAGAGCTGAGATGCAGTCTCAGTCATTCAGAGCCCTTCTTACCTCTTCAATgaaaggggacagaggagagccGGGAACTAAAGGCGATGCAGGGAATCATGGAACTAAAGGTGACAATGGTTTCCCAGGACTGCCAGGTCCTCCAGGTGCCATTGGTCACCCAGGACACGAAGGACCCAAAGGACAAAAAGGAAGTCAAGgtgacCATGGAGCTGAGGGGCCACAAGGGCTCAGGGGCCGAGAGGGGCCTGGAGGGCCCAGAGGGGAGCCAGGACCCTCAGGGtttggagagaagggggagaaagGTTCTCCTGGTGAATCAGGATCTCTTGGTCCTGCTGGTCCAGTCGGCCCGGCTGGGCCCAAAGGCTCAGGGGGTGCTCCGGGTACTCCTGGTACGCCAGGCCAACCAGGATCTCAAGGCTTCCGTGGAGAATCAGGACTACCTGGTCCGAAGGGGGAGAGGGGTCCTGCTGGATTTCAGGGAATCAAAGgTGATCATGGTGAGAAAGGACCTCGTGGTGCCGCAGGTGACCCAGGACTATCAGGCTTGCCAGGACCAGCCGGAGAGAAAGGACCCAAAGGATCTGCAGGAACTCCTGGAATTGATGGTGACAAAGGCCAAAGAGGTGATCACGGTCCTACTGGGTTACCAGGGATCAGAGGTCCATCTGGGCCTGCAGGGGACTCAGGCCTACCAGGAACACCCGGGCTTCAAGGGCCACCAGGAATACCAGGGAATCCTGGACAACCAGGAGCCAAGGGTGAGGCAGGAGAACCAGGAAGAATCATCAATGCAGGGGGATCCAGTTCTGTGGCCATCCCCGGCCCCCCAGGAAGCCCCGGAGCACCCGGTCAAGCCGGACCCCCAGGGTTATCAGGCCCCATTGGCCCTGCTGGTCTTCCTGGCCAGTCTGGTCCTAAAggtgagagagggctgaaggGTGAGATGGGTATTCAGGGACTCCAGGGAGAGGCAGGTATCTCAGTGAAAACCAGTGAAACCGTCAGCTCATCCAGAGCTGAGAGACAGTTCAATCTTCCTGCACAACCAGGTCCCCCTGGTCCCCCTGGACCCCCTGGAGCCCCTGGACGTGCAGGTGACTCAAGATCAGGACTCCCAGGACCAGCTGGTCCCCCAGGAGAGCCAGGATATGGCAGACCTGGTcctagaggagagaaaggagagtcaGGAAGCTTTGTACCCAATTCAGGAACATTCTTCTCTGGACCCCCTGGACCACCCGGGCCATCTGGGCCAAAAGGATCACCCGGTACACCAGGACCAAGAGGAAACCAAGGAGATGCAGGCCAGCCTGGTCTACCAGGGAGCCCAGGAAGACCAGGAGGAGGCTCTGAAAGAGCATCACCATACGGTGGAACACATGGGCCACCTGGGCCCCCAGGGACTCCAGGGATTCCTGGACCAGAGGGACGGAAAGGCGAACCTGGAATTCCCGGTTCTCCTGGTCTTCCTGGCTCTGCAAGAGGCACTGTGGCGGCCAGCTCAGGGTTCCCAGGTCCTCCTGGTCCACCGGGTCCTCCCGGACACCCAGGCATTCCAGGCATAGCCTCTGCTCCTCCTGATCTGCGTCAGTATGTCAACGACTATCTCCGAATTAATGCTAGGAGTATGTCCTCTGGTCTTCCTGGCCCCCGTGGCCTCCCTGGACCCCCAGGAGCCCCTGGATCCTCTGGATCCTCTAGTTCTGTGGAGGACATATCTTCTCGTGTCATTGCTTATCTGCAGCGTTCAGGATCAGGCTTCGGCGGTGGTGCTCAGGGTCCTCCAGGCCCCCCAGGACTTCCTGGGTcctctggctctggttctggcTCAATGTCTGTCAACGACCTCATTGTTATGCTACAGAGGGATGACGTACGGCGATATGTAATGGGCCCACCCGGACCTCCAGGCCCAGCAGGACCAGCAGCCAGAGGAGGCAGTACGGCAAACTACGACCCACAGGAAGTGGCTACCTACGTCTTCAGAATCATGAACGaACGCGGGATCGGTGGTGGGCAGCCTGGACCTCCGGGTGCAACCGGGCCTCCAGGGCTACCTGGCTCCTTCAGCGGTGTTAGTGACATCTCCGCACTCCTGCAAAATTCACAATTCCGTGCAATGGTTGGGCGCTCTGCTGGAGCCCCTGGTCCTCCTGGTACTCCAGGTATCCCGGGACCCCCAGGCACCCCTGGTACCCCAGGAGGGTCATCTTACAGGAGCTCAGCCTCAGGGGGTTTAAGGATAGAGGACGTCCAGCATTACCTACAAAGTTCTGGGTACAGTGGTCCTCCAGGGCCACCCGGCCCCCCAGGACCTCAGGGGCCCCCAGGGAACTCTCACGGAGTAGTCTCCTATGGAGATAGTAGAAACATAGGAAACTACCAGCGAGAAAGCATCCGCACAGAACTCCAGGCGTACCTCAGCAGTGACAGTATACGGCACTCCTTCATTGGCCAACCAGGTCCTCCTGGGTCTCAGGGTCCCCGTGGTCACAAAGGAGACCCTGGAGAACCTGGTGGGGTTCAGACTAACCGTCAGAGTTATGCCCAGAGTGACCCACGTTACTCTTCTGACCTTGAGCGGCGCCAGAGTGACATTGGGAGATTGACAGAGCCACTAGACTACTCCAACGTTGCCTTGAGAGTGACAGACTACATCAAGAACCAGGGCTTACTGCAGGACATCCTGTCTGAGAGTCACCAGCGAGGAGGCTCCTGGGAGTCCCAAGGCCTCCCAGGACCCCCTGGGCCTCCTGGACCTCCCGGGTATAGCCGTGTCATTGGAGCTTACGGCAACGTGACTGCTGACCTCATGGACTTCTTTAGAACCCACGGCACCATTGTTGGCCCCCCAGGGAATACTGGCCCGAAAGGAGACAGGGGGTACCTCGGACCCAAAGGAGACAGAGGCGAGATGGGTCGCCCAGGCCCTCCAGGACTGCAGGGACTACATGGTCAGGATGGAtacagaggagagaagggagagaaagGTGCAGGTGAAGTTAGGGTTGGTCGTCGGCGTCGGAGCATCGGTGTTTAAGGTGTTTTAAGCTTAACCAGATCTATCAGATAAAGCTTTATTTCTATTCAGCTCTTCTGTCCTGTGCATAGTCAAAATCATACATTACGTTAGAATATGCCTGCTTGCCTATTCAATTACAGTTTCTTTTTTGAGTGTGAATAAAATGGATGATATGGAAATGTTATAGTGGCAGTAAAGCAGAGGTCTCCGACAGGTACTATAGGTTGCGAGCTAGCAGTAGCTCgcagcccacctatgagtagGTCGCCAAGTAATTCTGAAAGTACatggattttttaaaatatgttccATTGCAAACTGTCATAAACATAAAGCTCCTGGCAACCATCCAATCAAAGccacattgacattatcccacccctggttagccactattggcttaaaaagccaAATATAACACAATATCTGGCAATTAATTTCAAGCAATATTGCACTTCTGTCTGTATGGTTCACAAATGTGTCTCACTGTATGTAACCTGTTAGCGATGCTAGTAATGATAACCGTCTTGTGGGTACACAGACTTTCCCCAAAAACCTTCTGCCTACCTGACAGAAATATATAATGATTATTCGTATCAATTGggtgttcttttttttttactctgccATGAGGTGCTGCAGAAGTAGGCCTAACATAGACATTGATAGACTCAGACATTCCTATCTTTCTAAATGCGCAATTAAAGGGTAATTACActcaaaaatctaaatgtatgttttttttccaGACCTCAAAATTAGTCGtctgatgtgatttaagcattgacaTGGACTCAAAACATCAATTGTGGTTATTTTTCTATGAATAACTCTAATATTAAGAGTAaaaaacataatacaaaaataCAGCAATTTTATGGGGCCCCTTAGAGTtgtttattaaccattattttactAGAAAACACATATATTGTACAACAAGGACCCGGGGAAGACAGGTGAAGAGAAGAATGTGCCTATTTGAAAGTAAAAAATAGTTTTGAAGTACagtagctctcatgctagaaaaggttggagacccctgcacTAAATAATGTGTTTAACAGTCTGAAGTAGAGTGATACATTGGCTGCTGGTCATGGTTGTGGTTGCACTCTTTGATATTCTAGTTAGTATGTGGGTGTATCGTGTTTACCTTTCTTAATAAAGCTCTAGTTATTTTTCTCAAGGGAACTCATGGGAAAATGTACTTTTCAAAAAGATAATGATAGTTATGGATCTTAGCTTTATTGATAACATTAAAGTATTTTTCACCCAAAACGTTTAAGTGTTACTTGGGCACTTTTGAACCACTCAAAACAACAATTGTCATTTATTCTTTATTTTCATTAAAACTTCAGAAaacttaattttcaataaatgtttatTCCTTGTCAAGCCATGTATTGAAAATTATTGCAATGTATTTTGTGTGGAGAAAAGAAAACTGCACTGAAATGGACTCTTGTCATGTTGATGTTGACCAGCTTTTTGTACCTTGAAGTAAATTCTACAAATAACAATAAATACTATTAGTAAGAACAAACAAGAACATAGTTTAACATaattattgttttatttacaGCACAAATGTCCATTAACAAACATCTTATATACACTTTACCTGACCTCAAAAATGCATATGTTTGTTCAGGATGATAAGATGTCCCACATTATAGCTAAATGCAACAACAATAGGCTCATGACGTGTTATATTTTAAATCAACCCCTGTTGATTTTCAATATCCAATTACTTGCAATAGTTTTGTGCCTGTAggtatttgaaaaaaaaaaaaagtaacaaagAAAA
>XM_021611218.2
aagaggcAGGTATAAGGACAAACCACTTCACTACCCTGCAACAGTAACATCAACAACATTCACTACCTGACGGATATCAGTTGGACTATCTTAGTGGATTTTATTTATCTTCTTCAGAAGTTGACTGAAGATTCTCCTATTGACACACACTAAAGATAACATGGGATGGATGATTTAACAACAAGAAAGAGAAACCACTCAGGAGGAAGCTCCGGGGGAAAGGTTGTGACAGAAACTACAACCTCGACAAGTAGATTGGTATCTTTACCTCCAAAGGGTGGCAGTGGATCAAAAAGTAGTACCCACAGGACTATGTCTAGCAATGCTGGAGGCCTGTGGTTGGAAAAGAACATTTTAACCCAGAACAGCAGTGGAACTAACTTTTCCTCATCTTCTGTGGGTGTCAATGCCGGAGGATCCAGCTCCTCATCAGGGTTCTACATGGGGGACTACTCTGAgggtggtggagatggtggagggggaggtggtggagggggaggtggtggaggtgggggaggtggaggaggcggCGGAGGTGTTGGCAGTGGAGGTGGGGGTGGCTCAGGCTATGGAGGAGTGTATGGAGGAAGCCCCGGGTCAAAAGTAAAGAGCAGCTCGTCAGGGTGCTCCAGGAGGGCCCAGAGCTCTGCCTCGCCTGGGGGTCTCTCCCCTGGCTTCCTGGAAAGGAAGAGTATGGCCAGTCGCTCAGGAGGCTACGACGGAAGCTCAAGTGGCAACTCCTCCCCCGAGTTTACACGGAAAGACTATGCAGGGTCAGGTGCCACTAGAATAGGGAGGAGCCAGAGCAGAGAGAGTGAAATCAGAGCCAGACTGCAGAGTGCCTCTCCCAGTGCTGGCAGATGGACTGAGCTGGATGATGTGAAGAGGCTGGTGAAGGGAGGACGCTCCAACAGTGTCAGCCCCACCCGCTCCTCCGCTTCCTCCACCCTGCCTGTCCCCAGGAAGGCCACCGTCGAGGCCAAGATCGTCACCCAGGCCTCCCAGTCAGTCTCTGGGCAGTATGAGACCACTACCCTGGACTCTGGCCTACCTTCTTCCTACTGCTGGACTAGCTCTACGCTGCCCATCTCCTCTGCCACTGGCAACAGCAGCAGCGCATACGGTTACCATAGTAACACAAACAACATGTCTCCAGGCTTGGGGTCCTCCCTGCTCAACACCACCTCACCCTCCTCCTTGTCAGTGTATGGATTCCAGAATAACTTGGCGCCCATGTCCAGTAGTGTCCTCACCACCAGTGGAGTTAACGCACATTCAGGCACTTTGACAGGATATGGAGTGCAGAAGAACATATCGAATGGTGGTGGTCTCGTCAGCACCGGAGTGTCAACCTCTGCAATGTCCGCTTTGAGGTCTCACACTGATGACGCATACAGGAAAGACTTAAAGTACCTTGTGCTGCAGAAGGAGAATGTTCCAGTCAAGAGAGATACTGAGGTGCTCACCCTCACAAAAGACAGTGGAAAACACTTCACTAGCAGTGTTCGCAGTGTTGGGGGTTCACTGTCTGGTGATTCTCTAAAGAAGGAGAAGATGGTGTCCAGCTACAGTGAGACTGCACCAGTCCTTCTGAAGTCTGAGTCCAATTCATACTATGGATCACCCCTAGTGTCAACAAAAGACAAAGCAACATATGCAGAGATCCAAAAAGAGGGGGACTACTACAGCAGCGGAGGACGAGGTGGGGGCTGCTGTGGGTGTGAGGACTCCTGCTGTTCCTGGTGGAAGTGGCTGCTAGGACTGCTCCTGCTCTCCCTGCTGCTCCTGGGCCTGCTCTTTGGGCTCATTGCCCTGGCGGAGGACGTGAGGAATCTGAAGTCTCGAGTGGCAGCTCTGGAGACCACCTCCACCGCTGCTCACGCCAGCCGCCTGTCAGCCTCCAATAACGACATCCACAACCCCCAGTCTGGCACCTACATGGACACTGGGGGCGCGGCCCGCTCCGACAACACCCTGAACCTGGATACCAGCCTGGGCATGGGGATGGGCACTGGCACGGGCACTGGCATCGCCGGGCACACAGACAATGCTGCCCTCCAGAGGACCATCCAGCAACTACTGAGAGCTGAGATGCAGTCTCAGTCATTCAGAGCCCTTCTTACCTCTTCAATgaaaggggacagaggagagccGGGAACTAAAGGCGATGCAGGGAATCATGGAACTAAAGGTGACAATGGTTTCCCAGGACTGCCAGGTCCTCCAGGTGCCATTGGTCACCCAGGACACGAAGGACCCAAAGGACAAAAAGGAAGTCAAGgtgacCATGGAGCTGAGGGGCCACAAGGGCTCAGGGGCCGAGAGGGGCCTGGAGGGCCCAGAGGGGAGCCAGGACCCTCAGGGtttggagagaagggggagaaagGTTCTCCTGGTGAATCAGGATCTCTTGGTCCTGCTGGTCCAGTCGGCCCGGCTGGGCCCAAAGGCTCAGGGGGTGCTCCGGGTACTCCTGGTACGCCAGGCCAACCAGGATCTCAAGGCTTCCGTGGAGAATCAGGACTACCTGGTCCGAAGGGGGAGAGGGGTCCTGCTGGATTTCAGGGAATCAAAGgTGATCATGGTGAGAAAGGACCTCGTGGTGCCGCAGGTGACCCAGGACTATCAGGCTTGCCAGGACCAGCCGGAGAGAAAGGACCCAAAGGATCTGCAGGAACTCCTGGAATTGATGGTGACAAAGGCCAAAGAGGTGATCACGGTCCTACTGGGTTACCAGGGATCAGAGGTCCATCTGGGCCTGCAGGGGACTCAGGCCTACCAGGAACACCCGGGCTTCAAGGGCCACCAGGAATACCAGGGAATCCTGGACAACCAGGAGCCAAGGGTGAGGCAGGAGAACCAGGAAGAATCATCAATGCAGGGGGATCCAGTTCTGTGGCCATCCCCGGCCCCCCAGGAAGCCCCGGAGCACCCGGTCAAGCCGGACCCCCAGGGTTATCAGGCCCCATTGGCCCTGCTGGTCTTCCTGGCCAGTCTGGTCCTAAAggtgagagagggctgaaggGTGAGATGGGTATTCAGGGACTCCAGGGAGAGGCAGGTATCTCAGTGAAAACCAGTGAAACCGTCAGCTCATCCAGAGCTGAGAGACAGTTCAATCTTCCTGCACAACCAGGTCCCCCTGGTCCCCCTGGACCCCCTGGAGCCCCTGGACGTGCAGGTGACTCAAGATCAGGACTCCCAGGACCAGCTGGTCCCCCAGGAGAGCCAGGATATGGCAGACCTGGTcctagaggagagaaaggagagtcaGGAAGCTTTGTACCCAATTCAGGAACATTCTTCTCTGGACCCCCTGGACCACCCGGGCCATCTGGGCCAAAAGGATCACCCGGTACACCAGGACCAAGAGGAAACCAAGGAGATGCAGGCCAGCCTGGTCTACCAGGGAGCCCAGGAAGACCAGGAGGAGGCTCTGAAAGAGCATCACCATACGGTGGAACACATGGGCCACCTGGGCCCCCAGGGACTCCAGGGATTCCTGGACCAGAGGGACGGAAAGGCGAACCTGGAATTCCCGGTTCTCCTGGTCTTCCTGGCTCTGCAAGAGGCACTGTGGCGGCCAGCTCAGGGTTCCCAGGTCCTCCTGGTCCACCGGGTCCTCCCGGACACCCAGGCATTCCAGGCATAGCCTCTGCTCCTCCTGATCTGCGTCAGTATGTCAACGACTATCTCCGAATTAATGCTAGGAGTATGTCCTCTGGTCTTCCTGGCCCCCGTGGCCTCCCTGGACCCCCAGGAGCCCCTGGATCCTCTGGATCCTCTAGTTCTGTGGAGGACATATCTTCTCGTGTCATTGCTTATCTGCAGCGTTCAGGATCAGGCTTCGGCGGTGGTGCTCAGGGTCCTCCAGGCCCCCCAGGACTTCCTGGGTcctctggctctggttctggcTCAATGTCTGTCAACGACCTCATTGTTATGCTACAGAGGGATGACGTACGGCGATATGTAATGGGCCCACCCGGACCTCCAGGCCCAGCAGGACCAGCAGCCAGAGGAGGCAGTACGGCAAACTACGACCCACAGGAAGTGGCTACCTACGTCTTCAGAATCATGAACGaACGCGGGATCGGTGGTGGGCAGCCTGGACCTCCGGGTGCAACCGGGCCTCCAGGGCTACCTGGCTCCTTCAGCGGTGTTAGTGACATCTCCGCACTCCTGCAAAATTCACAATTCCGTGCAATGGTTGGGCGCTCTGCTGGAGCCCCTGGTCCTCCTGGTACTCCAGGTATCCCGGGACCCCCAGGCACCCCTGGTACCCCAGGAGGGTCATCTTACAGGAGCTCAGCCTCAGGGGGTTTAAGGATAGAGGACGTCCAGCATTACCTACAAAGTTCTGGGTACAGTGGTCCTCCAGGGCCACCCGGCCCCCCAGGACCTCAGGGGCCCCCAGGGAACTCTCACGGAGTAGTCTCCTATGGAGATAGTAGAAACATAGGAAACTACCAGCGAGAAAGCATCCGCACAGAACTCCAGGCGTACCTCAGCAGTGACAGTATACGGCACTCCTTCATTGGCCAACCAGGTCCTCCTGGGTCTCAGGGTCCCCGTGGTCACAAAGGAGACCCTGGAGAACCTGGTGGGGTTCAGACTAACCGTCAGAGTTATGCCCAGAGTGACCCACGTTACTCTTCTGACCTTGAGCGGCGCCAGAGTGACATTGGGAGATTGACAGAGCCACTAGACTACTCCAACGTTGCCTTGAGAGTGACAGACTACATCAAGAACCAGGGCTTACTGCAGGACATCCTGTCTGAGAGTCACCAGCGAGGAGGCTCCTGGGAGTCCCAAGGCCTCCCAGGACCCCCTGGGCCTCCTGGACCTCCCGGGTATAGCCGTGTCATTGGAGCTTACGGCAACGTGACTGCTGACCTCATGGACTTCTTTAGAACCCACGGCACCATTGTTGGCCCCCCAGGGAATACTGGCCCGAAAGGAGACAGGGGGTACCTCGGACCCAAAGGAGACAGAGGCGAGATGGGTCGCCCAGGCCCTCCAGGACTGCAGGGACTACATGGTCAGGATGGAtacagaggagagaagggagagaaagGTGCAGGTGAAGTTAGGGTTGGTCGTCGGCGTCGGAGCATCGGTGTTTAAGGTGTTTTAAGCTTAACCAGATCTATCAGATAAAGCTTTATTTCTATTCAGCTCTTCTGTCCTGTGCATAGTCAAAATCATACATTACGTTAGAATATGCCTGCTTGCCTATTCAATTACAGTTTCTTTTTTGAGTGTGAATAAAATGGATGATATGGAAATGTTATAGTGGCAGTAAAGCAGAGGTCTCCGACAGGTACTATAGGTTGCGAGCTAGCAGTAGCTCgcagcccacctatgagtagGTCGCCAAGTAATTCTGAAAGTACatggattttttaaaatatgttccATTGCAAACTGTCATAAACATAAAGCTCCTGGCAACCATCCAATCAAAGccacattgacattatcccacccctggttagccactattggcttaaaaagccaAATATAACACAATATCTGGCAATTAATTTCAAGCAATATTGCACTTCTGTCTGTATGGTTCACAAATGTGTCTCACTGTATGTAACCTGTTAGCGATGCTAGTAATGATAACCGTCTTGTGGGTACACAGACTTTCCCCAAAAACCTTCTGCCTACCTGACAGAAATATATAATGATTATTCGTATCAATTGggtgttcttttttttttactctgccATGAGGTGCTGCAGAAGTAGGCCTAACATAGACATTGATAGACTCAGACATTCCTATCTTTCTAAATGCGCAATTAAAGGGTAATTACActcaaaaatctaaatgtatgttttttttccaGACCTCAAAATTAGTCGtctgatgtgatttaagcattgacaTGGACTCAAAACATCAATTGTGGTTATTTTTCTATGAATAACTCTAATATTAAGAGTAaaaaacataatacaaaaataCAGCAATTTTATGGGGCCCCTTAGAGTtgtttattaaccattattttactAGAAAACACATATATTGTACAACAAGGACCCGGGGAAGACAGGTGAAGAGAAGAATGTGCCTATTTGAAAGTAAAAAATAGTTTTGAAGTACagtagctctcatgctagaaaaggttggagacccctgcacTAAATAATGTGTTTAACAGTCTGAAGTAGAGTGATACATTGGCTGCTGGTCATGGTTGTGGTTGCACTCTTTGATATTCTAGTTAGTATGTGGGTGTATCGTGTTTACCTTTCTTAATAAAGCTCTAGTTATTTTTCTCAAGGGAACTCATGGGAAAATGTACTTTTCAAAAAGATAATGATAGTTATGGATCTTAGCTTTATTGATAACATTAAAGTATTTTTCACCCAAAACGTTTAAGTGTTACTTGGGCACTTTTGAACCACTCAAAACAACAATTGTCATTTATTCTTTATTTTCATTAAAACTTCAGAAaacttaattttcaataaatgtttatTCCTTGTCAAGCCATGTATTGAAAATTATTGCAATGTATTTTGTGTGGAGAAAAGAAAACTGCACTGAAATGGACTCTTGTCATGTTGATGTTGACCAGCTTTTTGTACCTTGAAGTAAATTCTACAAATAACAATAAATACTATTAGTAAGAACAAACAAGAACATAGTTTAACATaattattgttttatttacaGCACAAATGTCCATTAACAAACATCTTATATACACTTTACCTGACCTCAAAAATGCATATGTTTGTTCAGGATGATAAGATGTCCCACATTATAGCTAAATGCAACAACAATAGGCTCATGACGTGTTATATTTTAAATCAACCCCTGTTGATTTTCAATATCCAATTACTTGCAATAGTTTTGTGCCTGTAggtatttgaaaaaaaaaaaaagtaacaaagAAAA
>TU90815
caGCACAAATGTCCATTAACAAACATCTTATATACACTTTACCTGACCTCAAAAATGCATATGTTTGTTCAGGATGATAAGATGTCCCACATTATAGCTAAATGCAACAACAATAGGCTCATGACGTGTTATATTTTAAATCAACCCCTGTTGATTTTCAATATCCAATTACTTGCAATAGTTTTGTGCCTGTAggtatttgaaaaaaaaaaaaagtaacaaagAAAATAGAAATATGATAATGCCTGAACCATATAGAATTACAGAGTCCTCTAGTGGTCAAAATGCTGTATTAGCATGtgcagcgccattgagggcttccaccattttaatgtagtcaactgggtggctGAACCCTCTTGGTGGCCTTGTTCGAGTCATGTCTAACccgggtcatcaggagggatcagccaatcgcaaagaagaaaattgactacttcaaaatggagattgcctcaatggcactgcccatgctgtcacagatgctataatGGTCCAGATACAAAGATGAAACCCCCATCTAGCGCTATGGCCTGAACCTAATGTGCATTACGGGTAATATTACCCACAATCCCAATACAAATCCAGAATTCAAGACGTGATGTCATTGTAATAAAATAACAGCATTCACCCTTTGCATGCCATCTATGTTTTTTATTAGGACGTCATACACAAACCATGAcatgctataagaatatgtttgTTATAGAGCGCTTGCCATCATGTCAAGGGGACTCACTTGAAGGGGTCAGTACTTTGTCCATATTattaatacatacagtacatacattctTATTTGAATCAACTAATTAGGACAGTATAATGACTTCCATTTACAGATATCATATTGTCCATCCAAAAACGATGTCCAAAGACTATATTGAGATGTACATTGATACAACATGTATACATATTTAGAAAACTGGTCATCATAAAATAGCAGGGATGAGATCAATTCCAGAAATTCAATTCAAATCGCTCTCCCTGTAAATCccatttaaattaaattcaagTTCCGGATCAATCTTTAATTTCAGAGATAATTCCATTCAACTCAATATTATCACAACAATTCAACAAATTCCAACTCTAATTCAGTTCCCTCAGGCTTTGAGGCTGACCATAtcactgttcagacagcctagctatacctgaaatatagaaatacaagTTGAaatgattcaaatcaaatcatacaGTCAATGTTTGATGCTATATGTGCATTCACTTTATTAACTGGTTTTTACAATTCCAATTCAAAAAGTCCAAACAATCTAATTCCAGTTCAATTCCATAGCTTGAAGACTTTTTAAAAATGAGAATTGAATTAAATTCTCCACTTCATGAGTGAATTCAAACTATTTATTGGAATTTTAAATTAAAttagaattgaccccaacccagtAAAATAGTAAGGACATATTTCAAATTGAAAATAAAAGTATAAATACAGAACAAAATGCAAGGCGCCACAGCTTTGAATGATTCAGttcatttgaaaataaaatagATTTGGGTAGAGGCGGCAAAAAGTCATTTGAAAATAGAACTAATCCAAGTGGACCCTCGTTTTTTTACTGACTGTAAgacacagtgagctccaaaagtattgggacagtgacacacgTTTTGTCGTTTTAGCTCTGTATCGTTTCAAATACAGAGTACAATGACTATAAGGTTAAAgtatcatttaaaatccaaagtgctggagtacagagcaaaaaataaaaatgtgtcactgtcccaatacttttggagctcactgtacatACATAACAGTCCATTACTGCATATTCTCAGTTcacataaaacagtgaaaaattaTGACCAGCGGCTTACATTCCTTTCAGCGTAATAATATGTATGTCTGCCACATCCAAAATAATGTGTTCAAAGTATAACCAAAAGACAATAAGCTGTGTCGATTTTTAACAGGAAAGGTGACTGACATGATGACAACCCAGAAGTCTAACAAAAACTATCTACTGATTACAATAGGGAGAAAGTGGGAACATTTGTTCTAATATACaggacagtttgatttgattgattcaaCAGCACAGTATCTAAAATAAATCACAACTCCATACATAGTACATCACGTGAATGAGCACTTCACGATTTACCAAAAAATGACTTTTATTTGTTAACAGATATCCATCAATCAACGACCTTAGAATGAACTCAACCACCAGCTTATATGGATCACTAAAAAATACAAGTTTGATGGTATTTCATGGTTTGTACAAATTTCCAGCCATTTTAGTGCAAAAGGCCTCAGGGGAGCACTGGGCTGCAGGTAAGAGAGCAAGTCTGGAGAAAAGCACGATCATTATGTCAATTCATTTAGGCACTGGGTTCTTTATAAACTTGGTACTTGCAATTGGTTTGAAATTTGCCTGAGCTATTTTAAAAGTGGTAGAACATAACCGTGCTCAGAAAAGTGCAATTGTCACTTTTGACAACATTTTCCTTGGAGCTGAGAAGGGTGAAATTGTAAGGGGGAAGAAGGAGAAAATAAAGTCTTGAAAAGGAAAGTGTTGTGATTGCATCCCTCTATATGACAGCTgacactgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacttaAGTGTGTGCTCTTGCatatgtacactactgttcaaaagtttggggtcacttagaaatgtccatgttttttcaagaaaagcacattttctgtcctttaaaataacatcaaattgatcagaaatacagtgtagacattgttaatgttgtaaattactattgtagcaggaaacctatctacataggcgtacagaggtccattatcagcaatcatca
>TU90816
caGCACAAATGTCCATTAACAAACATCTTATATACACTTTACCTGACCTCAAAAATGCATATGTTTGTTCAGGATGATAAGATGTCCCACATTATAGCTAAATGCAACAACAATAGGCTCATGACGTGTTATATTTTAAATCAACCCCTGTTGATTTTCAATATCCAATTACTTGCAATAGTTTTGTGCCTGTAggtatttgaaaaaaaaaaaaagtaacaaagAAAATAGAAATATGATAATGCCTGAACCATATAGAATTACAGAGTCCTCTAGTGGTCAAAATGCTGTATTAGCATGtgcagcgccattgagggcttccaccattttaatgtagtcaactgggtggctGAACCCTCTTGGTGGCCTTGTTCGAGTCATGTCTAACccgggtcatcaggagggatcagccaatcgcaaagaagaaaattgactacttcaaaatggagattgcctcaatggcactgcccatgctgtcacagatgctataatGGTCCAGATACAAAGATGAAACCCCCATCTAGCGCTATGGCCTGAACCTAATGTGCATTACGGGTAATATTACCCACAATCCCAATACAAATCCAGAATTCAAGACGTGATGTCATTGTAATAAAATAACAGCATTCACCCTTTGCATGCCATCTATGTTTTTTATTAGGACGTCATACACAAACCATGAcatgctataagaatatgtttgTTATAGAGCGCTTGCCATCATGTCAAGGGGACTCACTTGAAGGGGTCAGTACTTTGTCCATATTattaatacatacagtacatacattctTATTTGAATCAACTAATTAGGACAGTATAATGACTTCCATTTACAGATATCATATTGTCCATCCAAAAACGATGTCCAAAGACTATATTGAGATGTACATTGATACAACATGTATACATATTTAGAAAACTGGTCATCATAAAATAGCAGGGATGAGATCAATTCCAGAAATTCAATTCAAATCGCTCTCCCTGTAAATCccatttaaattaaattcaagTTCCGGATCAATCTTTAATTTCAGAGATAATTCCATTCAACTCAATATTATCACAACAATTCAACAAATTCCAACTCTAATTCAGTTCCCTCAGGCTTTGAGGCTGACCATAtcactgttcagacagcctagctatacctgaaatatagaaatacaagTTGAaatgattcaaatcaaatcatacaGTCAATGTTTGATGCTATATGTGCATTCACTTTATTAACTGGTTTTTACAATTCCAATTCAAAAAGTCCAAACAATCTAATTCCAGTTCAATTCCATAGCTTGAAGACTTTTTAAAAATGAGAATTGAATTAAATTCTCCACTTCATGAGTGAATTCAAACTATTTATTGGAATTTTAAATTAAAttagaattgaccccaacccagtAAAATAGTAAGGACATATTTCAAATTGAAAATAAAAGTATAAATACAGAACAAAATGCAAGGCGCCACAGCTTTGAATGATTCAGttcatttgaaaataaaatagATTTGGGTAGAGGCGGCAAAAAGTCATTTGAAAATAGAACTAATCCAAGTGGACCCTCGTTTTTTTACTGACTGTAAgacacagtgagctccaaaagtattgggacagtgacacacgTTTTGTCGTTTTAGCTCTGTATCGTTTCAAATACAGAGTACAATGACTATAAGGTTAAAgtatcatttaaaatccaaagtgctggagtacagagcaaaaaataaaaatgtgtcactgtcccaatacttttggagctcactgtacatACATAACAGTCCATTACTGCATATTCTCAGTTcacataaaacagtgaaaaattaTGACCAGCGGCTTACATTCCTTTCAGCGTAATAATATGTATGTCTGCCACATCCAAAATAATGTGTTCAAAGTATAACCAAAAGACAATAAGCTGTGTCGATTTTTAACAGGAAAGGTGACTGACATGATGACAACCCAGAAGTCTAACAAAAACTATCTACTGATTACAATAGGGAGAAAGTGGGAACATTTGTTCTAATATACaggacagtttgatttgattgattcaaCAGCACAGTATCTAAAATAAATCACAACTCCATACATAGTACATCACGTGAATGAGCACTTCACGATTTACCAAAAAATGACTTTTATTTGTTAACAGATATCCATCAATCAACGACCTTAGAATGAACTCAACCACCAGCTTATATGGATCACTAAAAAATACAAGTTTGATGGTATTTCATGGTTTGTACAAATTTCCAGCCATTTTAGTGCAAAAGGCCTCAGGGGAGCACTGGGCTGCAGGTAAGAGAGCAAGTCTGGAGAAAAGCACGATCATTATGTCAATTCATTTAGGCACTGGGTTCTTTATAAACTTGGTACTTGCAATTGGTTTGAAATTTGCCTGAGCTATTTTAAAAGTGGTAGAACATAACCGTGCTCAGAAAAGTGCAATTGTCACTTTTGACAACATTTTCCTTGGAGCTGAGAAGGGTGAAATTGTAAGGGGGAAGAAGGAGAAAATAAAGTCTTGAAAAGGAAAGTGTTGTGATTGCATCCCTCTATATGACAGCTgacactgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacttaAGTGTGTGCTCTTGCatatgtacactactgttcaaaagtttggggtcacttagaaatgtccatgttttttcaagaaaagcacattttctgtcctttaaaataacatcaaattgatcagaaatacagtgtagacattgttaatgttgtaaattactattgtagcaggaaacctatctacataggcgtacagaggtccattatcagcaatcatca

Function

symbol description
col17a1 An extracellular matrix structural constituent conferring tensile strength. Involved in hemidesmosome assembly. Located in hemidesmosome. Implicated in epithelial recurrent erosion dystrophy; junctional epidermolysis bullosa; and junctional epidermolysis bullosa non-Herlitz type.

NR:

description
PREDICTED: collagen alpha-1(XVII) chain-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611215.2 False 6922 mRNA 0.51 55 73647943 73672307
XM_021611218.2 False 6919 mRNA 0.51 55 73647943 73672307
TU90815 False 2833 lncRNA 0.36 2 73672080 73674938
TU90816 True 2829 lncRNA 0.46 2 73672080 73674938

Neighbor

gene id symbol gene type direction distance location
cfap43 cfap43 coding upstream 10183 73600183 ~ 73637760 (+)
LOC110529046 LOC106577092 coding upstream 36932 73609009 ~ 73611011 (+)
LOC110529036 itprip coding upstream 58410 73580171 ~ 73589533 (+)
LOC118936305 LOC106577091 coding upstream 74572 73570975 ~ 73573371 (+)
LOC110529026 LOC106577090 coding upstream 94195 73551618 ~ 73553748 (+)
LOC110529112 sh3pxd2a coding downstream 42914 73715221 ~ 73810555 (+)
LOC118964464 NA coding downstream 270711 73943018 ~ 73943574 (+)
LOC110529121 LOC106577020 coding downstream 280383 73952690 ~ 74008104 (+)
LOC110529161 add3 coding downstream 438805 74111112 ~ 74160271 (+)
LOC110529185 mxi1 coding downstream 499426 74171733 ~ 74183699 (+)
G82105 NA non-coding upstream 101668 73546001 ~ 73546275 (+)
G82064 NA non-coding upstream 147994 73499646 ~ 73499949 (+)
G81807 NA non-coding upstream 189455 73458175 ~ 73458488 (+)
G81805 NA non-coding upstream 191266 73456461 ~ 73456677 (+)
G81804 NA non-coding upstream 191563 73455926 ~ 73456380 (+)
G82241 NA non-coding downstream 2785 73675092 ~ 73675396 (+)
G82564 NA non-coding downstream 495631 74167938 ~ 74168176 (+)
G82568 spf30 non-coding downstream 513281 74185588 ~ 74189683 (+)
G82575 NA non-coding downstream 521111 74193418 ~ 74193623 (+)
G82535 NA non-coding downstream 555596 74227903 ~ 74229003 (+)
G82111 LOC106577091 other upstream 76206 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 2571841 71036440 ~ 71076239 (+)
G78121 NA other upstream 2992982 70571665 ~ 70654961 (+)
G75747 NA other upstream 5273014 68374505 ~ 68374929 (+)
G74139 NA other upstream 6862974 66784335 ~ 66784969 (+)
G83836 NA other downstream 1236918 74909225 ~ 74909806 (+)
G83829 NA other downstream 1440353 75112660 ~ 75114190 (+)
G83979 NA other downstream 1472557 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 2785817 76457821 ~ 76459823 (+)
G86019 NA other downstream 2959438 76631745 ~ 76635936 (+)

Expression


Co-expression Network