LOC110529206 (ppp2r2d)


Basic Information

Item Value
gene id LOC110529206
gene name ppp2r2d
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74229248 ~ 74234117 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611333.2
GGAAGCGTGTCGAAATGACGTCATTGTGTTATGCAATGTGCGCCATTTTGGATGGAAAAAATCACGGACGATTTCCGTGATCCCTGACTCCTCACTTTGCCTGTGAATGTTGACTATTTTTTACCTCACGCAAGTTGCATTGGTTGAATAAACAGTGCAATCCGTGTTCAGTAATAGCTAACTCTGCTAAATGAAACAATGGCAGGAGTTGCCGGTGTAAATGATTTTCAGTGGTGTTTCTCACAAGTGAAAGGGGCGATAGATGAAGATGTTGCAGAAGCTGATATCATCTCAACGGTTGAATTCAACCATTCTGGAGAGTTGCTAGCAACTGGAGACAAGGGAGGCAGAGTTGTCATATTTCAACATGAACAGGAGTGTAAAAATCGACCAAACCTGCGAGGGGAATACAATGTTTATAGCACTTTTCAGAGTCACGAACCTGAATTTGACTACTTGAAAAGTTTAGAAATTGAGGAAAAAATTAACAAAATAAGATGGTTACCCCAACAAAACTCAGCTCACTTTCTACTCTCAACAAATGaTAAAACTATCAAATTGTGGAAAATCGGTGAACGGGACAAGCGGGCTGAGGGTTACAACTTGAAAGACGAAGACGGACGTCTCAGGGATCCCTTTAGAATTACTTCCCTACGGGTACCAGTGCTGATGCCCATGGATCTCATGGTAGAAGCAAGTCCTCGTAGGGTGTTTGCCAACGCTCACACATATCATATTAATTCAATTTCTGTAAATAGCGATCATCAAACATACCTCTCCGCTGATGATCTAAGAATTAATCTATGGCACTTGGAAATCACAGACCGAAGTTTTAACATTGTAGACATCAAGCCTGCCAACATGGAGGAACTGACAGAGGTGATCACAGCGGCTGAGTGCCATCCAAACCAATGCAATGTATTTGTGTACAGCAGTAGCAAAGGCACCATACGCCTCTGTGACATGCGAACAGCTGCACTCTGCGATAGCCACACCAAGTTCTTTGAGGAGCCTGAGGATCCAAGCAGCAGGTCATTTTTCTCTGAGATCATCTCGTCCATCTCTGACGTGAAGTTCAGTCACAGCGGGCGCTACATGATGACACGGGACTACCTCTCCGTCAAGGTGTGGGACCTCAACATGGAGAACAGGCCAGTCGAGACATATCAGGTTCATGAATACCTTCGCAGCAAGCTTTGCTCGTTATATGAAAATGATTGCATCTTCGACAAGTTTGAGTGCTGCTGGAACGGTAGCGACAGTGCCATCATGACCGGCTCCTACAACAACTTTTTCCGTATGTTTGACCGCAACACCAGGAAGGACATCACACTGGAGGCCTCTAGGGAGAGCAGCAAACCGCGGGCTACACTCAAACCCCGCAAAGTCTCCACCGGTGGCAAGAGGAAGAAAGACGAAATTAGCGTGGACAGCCTGGACTTCAACAAGAAGATCCTGCACACCGCCTGGCACCCCAAAGAAAACGTCATCGCTGTGGCGGCCACCAACAACCTGTACATTTTCCAGGACAAGATCAACTAAAAAAATAATTGGGCTCCATCCTGAGGACAAGGCTTTACTGTTCCTGCATAGTTAAGCCTAGTGGTTTATCTGTAACAGAAACAAACAGCCCTCTCGTCCTCCTGGTGAAGTTTAAAGCACTTGTCTCCTTTTTTTGTGGCAGGAGGTTGATTGGTCGTCCTGTTTTCTTTGGAGTCTGAGGTTGATTTAGCCTTGGGTAAATCAGTGCCAGGGCCAAGATCGGACCCTGAGAGCCCACCTTGTGTTGAATCAATAGAACGGCACTCATAAGAGGTCAAACTCTTGAACATTGGTGTTTGTGTTGATATTTTCAGCCTTCATTTCATAATCTTAACAACCAAACTATGGAAAGCCCTGAAGATGACCTCTTGTCATTTTTGTAACACCCTCATTAAGATTTTTTGGCCTTTCTGAAACATGGATATTTCATGGGTTATAGGCCTACCTGTTAACATTCCCCATTGACCATGCATTCAGGCTAAAGCACTTGCAACATGTTGTGAATTTGGAAAGTGGATTTCTTCTGTTCTCCACCCACACCCTCCTATCCAAAATGTATCCCCCCAGACATGGTAACGTTATATCACAGACTGTATCTATTCAAATACACCTTTACGGTGTCATCCACTTAATAAAAGTAAATAGAACTACATATGTGTTTTAGAATTTAAATCATGTTTATAGTTGCTTTGCATGTTTTTATGTTGTAGTTAGGTGGAAAAAATGTAAAGTCGTACCAGTCTTTTGAGTAGTTCTTTCAAGCTATCTCTAAAATAACTACTCTTAAGTTTCAGAATCACCATTTGAGACTGACCATGTGCAAGTGtcaatatatgtatgtatgtgttgccCTCATTTAAGAAACAGGCTGGAAACTTAATGTGAAGAGAcgcaagacaaagggaatctgcAGCCTTAATACCTACGTCTATCAATGACAGCTACCGGTTATGTCCCCAAATGTTTTACAAACCTTATGtgcattatttttttattctatttTATAGATTTATGTCTcatattactgctgctatttgTGGCTGTCTGTGAAACCAAGGTATATAATAGTCAGAGTACTGCACACCATACAGATAGATCTAGTGATAGACAGAGTTCCTCCAAAACATGGAAAGTTCTTTGTGTAGTAAGAGAAGGAGATTCAGACAAACCTCTTCTTACATGTGCCCTTTAAATCATTCATTGGTATGCCACTAAGGTCAAAACTGCATACTTTGTTTTCCAAGTTATATCAATGcaaaaatgaaggttaaatagaCCTGTACTGATTTTAAAAACAGGAACAACGGTAACAAAGCCTTTCTCTGTTTAATCATTCTGAACATGGTGGCAGTGTATTCACTTGTTTGATTATGTTGACCAAAGTTAAATAAAATCTAATTGTGTTCA

Function

symbol description
ppp2r2d Predicted to enable protein phosphatase regulator activity. Acts upstream of or within with a positive effect on myoblast fusion. Predicted to be located in cytoplasm. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Orthologous to human PPP2R2D (protein phosphatase 2 regulatory subunit Bdelta).

NR:

description
serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process
GO:0007165 signal transduction biological_process
GO:0000159 protein phosphatase type 2A complex cellular_component

KEGG:

id description
K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611333.2 True 2949 mRNA 0.42 10 74229248 74234117

Neighbor

gene id symbol gene type direction distance location
smndc1 spf30 coding downstream 39567 74183813 ~ 74189681 (-)
LOC110529148 NA coding downstream 143277 74081285 ~ 74085971 (-)
LOC110529136 LOC106608714 coding downstream 166940 74011991 ~ 74062308 (-)
LOC110529113 neurl1 coding downstream 342291 73826424 ~ 73886957 (-)
slka slk coding downstream 517954 73675658 ~ 73711294 (-)
mgmt mgmt coding upstream 114673 74348790 ~ 74378154 (-)
gnrh3 NA coding upstream 243054 74477119 ~ 74478278 (-)
LOC110529277 ptpre coding upstream 245821 74479938 ~ 74531625 (-)
LOC110529307 LOC106577031 coding upstream 475213 74709330 ~ 74728846 (-)
fank1 fank1 coding upstream 737655 74971772 ~ 74975108 (-)
G82968 NA non-coding downstream 2491 74225622 ~ 74226757 (-)
G82966 NA non-coding downstream 11598 74217379 ~ 74217650 (-)
G82963 NA non-coding downstream 15064 74213870 ~ 74214184 (-)
G82958 NA non-coding downstream 22122 74206307 ~ 74207126 (-)
G82951 NA non-coding downstream 31643 74197387 ~ 74197605 (-)
G82980 NA non-coding upstream 4859 74238976 ~ 74239184 (-)
G82984 NA non-coding upstream 7241 74241358 ~ 74241562 (-)
G82987 NA non-coding upstream 8818 74242935 ~ 74243145 (-)
G83008 NA non-coding upstream 20052 74254169 ~ 74254419 (-)
G83111 NA non-coding upstream 23601 74257718 ~ 74257956 (-)
LOC110528794 LOC106576993 other downstream 1977330 72202814 ~ 72251918 (-)
G80957 NA other downstream 2018159 72207929 ~ 72211089 (-)
G79904 NA other downstream 2485439 71743045 ~ 71743809 (-)
G79700 NA other downstream 2758789 71469435 ~ 71470755 (-)
G79616 NA other downstream 2842725 71321950 ~ 71386523 (-)
G83429 NA other upstream 338330 74572447 ~ 74572789 (-)
G84713 NA other upstream 1294226 75528343 ~ 75528903 (-)
G85866 NA other upstream 2099351 76333468 ~ 76334136 (-)
ccser2a ccser2 other upstream 2133176 76324531 ~ 76399997 (-)

Expression


Co-expression Network