gnrh3


Basic Information

Item Value
gene id gnrh3
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74477119 ~ 74478278 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124280.1
AGGAAGGAATACACAGAACGGAGAAAGTATGTGATTCATATAAGTATATTTCAAATTGTTAACTAATGTGCATTTGTGGGTAGttcatatatactgtacaatgtgcATATTCAATAGGTAATCATTGCAAAATGATCGCAAACTTCTGCTTGAtgtaaaaatacattatttttgaCGATCACATTTAGCTGATATTTGACTAGCTTTCTTTCCAGCTCCCATGGATCTTAGCAACAGAACGGTCGTGCAGGTGGTGGTGTTGGCGTTGGTAGCGCAGGTCACGCTCTCTCAGCACTGGTCGTATGGCTGGCTACCTGGAGGGAAGAGAAGTGTTGGGGAGCTGGAGGCCACCATCAAGGCAAGTACTATTTACCTCTACCTGTAACTACTGTTACAGCTATGTCTACATgtgcatactgtacatgtaattGTCCTTTAAGGAAATCTACTGTGTCTTGAAAACCTGTGAACATTTAAATGTGGCATTTATCGGGATAGTTTGTGTGGAATATTAGTTCAAGAGGCCTTTTCAAGAGTATATTGGCAATGTATATTAATTAAACTCTGTAAGTGTGTTGCATAAATGGTATATGGGTAATAGCCTTACAAATTCCTCCTACATATTGCTATCCAGATGATGGACACAGGAGGTGTAGTGGTTCTTCCTGAGGAGACAAGTGCACATGTCTCAGAGAGACTGAGACCATATGATGTAGTAAGTAGTCATATTAATTTATTAGGTTAgatattgtattcattgtattcctAATGGCCAATTATTTATGTTTCATCTGAAGATGCTACATTTTCTCCTGGTAAAATATGTTGTAAACAATATACCAAAGTATCTGAAATAAATGTTTAGATAAGAGTAATGGCTGACAAATGGAAATCTTCCCTGAATTTAGCGAAGTGATACCTATAAATGTAGGGAGACAATGTTGCTCATGTCTGACACATCAGTATAATATACAACATAAAGTAGACTTCTGAAGTTAACGCTTTGATTTCCCTAGATATTGAAGAAATGGATGCCCCATAAATAAACAACTGAGACCATTATTCACAAAAGAAGCGAGAAGACAACATCAAGCAGACATACAGCATC
>TU91962
AGGAATACACAGAACGGAGAAACTCCCATGGATCTTAGCAACAGAACGGTCGTGCAGGTGGTGGTGTTGGCGTTGGTAGCGCAGGTCACGCTCTCTCAGCACTGGTCGTATGGCTGGCTACCTGGAGGGAAGAGAAGTGTTGGGGAGCTGGAGGCCACCATCAAGATGATGGACACAGGAGGTGTAGTGGTTCTTCCTGAGGAGACAAGTGCACATGTCTCAGAGAGACTGAGACCATATGATGTAATATTGAAGAAATGGATGCCCCATAAATAAACAACTGAGACCATTATTCACAAAAGAAGCGAGAAGACAACATCAAGCAGACATACAGCATCACTATCAACATCAATGATGGAGCATTCAACTACAGTTCTGTCCATTTCCAAC

Function

NR:

description
gonadotropin-releasing hormone precursor II isoform A

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124280.1 False 1108 mRNA 0.37 1 74477171 74478278
TU91962 True 390 lncRNA 0.38 4 74477119 74478274

Neighbor

gene id symbol gene type direction distance location
mgmt mgmt coding downstream 99017 74348790 ~ 74378154 (-)
LOC110529206 ppp2r2d coding downstream 243054 74229248 ~ 74234117 (-)
smndc1 spf30 coding downstream 287490 74183813 ~ 74189681 (-)
LOC110529148 NA coding downstream 391200 74081285 ~ 74085971 (-)
LOC110529136 LOC106608714 coding downstream 414863 74011991 ~ 74062308 (-)
LOC110529277 ptpre coding upstream 1660 74479938 ~ 74531625 (-)
LOC110529307 LOC106577031 coding upstream 231052 74709330 ~ 74728846 (-)
fank1 fank1 coding upstream 493494 74971772 ~ 74975108 (-)
edrf1 LOC106577037 coding upstream 503978 74982256 ~ 74996768 (-)
LOC110529369 LOC100380861 coding upstream 634363 75112641 ~ 75133272 (-)
G83288 NA non-coding downstream 4911 74471986 ~ 74472260 (-)
G83278 NA non-coding downstream 13066 74463813 ~ 74464105 (-)
G83218 NA non-coding downstream 60711 74416239 ~ 74416460 (-)
G83217 NA non-coding downstream 61290 74415649 ~ 74415881 (-)
G83197 NA non-coding downstream 85871 74391013 ~ 74391300 (-)
G83336 NA non-coding upstream 4225 74482503 ~ 74482803 (-)
G83337 NA non-coding upstream 4762 74483040 ~ 74483326 (-)
G83338 NA non-coding upstream 6458 74484736 ~ 74484935 (-)
G83339 NA non-coding upstream 10730 74489008 ~ 74489236 (-)
LOC110528794 LOC106576993 other downstream 2225253 72202814 ~ 72251918 (-)
G80957 NA other downstream 2266082 72207929 ~ 72211089 (-)
G79904 NA other downstream 2733362 71743045 ~ 71743809 (-)
G79700 NA other downstream 3006712 71469435 ~ 71470755 (-)
G79616 NA other downstream 3090648 71321950 ~ 71386523 (-)
G83429 NA other upstream 94169 74572447 ~ 74572789 (-)
G84713 NA other upstream 1050065 75528343 ~ 75528903 (-)
G85866 NA other upstream 1855190 76333468 ~ 76334136 (-)
ccser2a ccser2 other upstream 1889015 76324531 ~ 76399997 (-)

Expression


Co-expression Network