insyn2a (fam196a)


Basic Information

Item Value
gene id insyn2a
gene name fam196a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 74682034 ~ 74709286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052852.1
GGACATGATAAGGAGCTCTTTACTGTTGCTGCATGAGCTCACCAGCTGTGGCGACTCTGGACTTTCCCCAACAGCTTGCactatccccctctctcaccctccctgtcactcaccctcactctctctcaccctcactttctctcaccctcactcttcccctctctctctctctctctctttctctcactcactcacactcccaaATGCACAGGGATTGCAGCAGCGCGAGATGGAGATCTCCACTGCGTGTGTGAGTGCCTATTGCCGGTGAGTGCAGGAACGGCAGCAGTGTCAGTGGTGCTTGagtgaggggaaagagagagagagaggcagagagagggagagaagtgggGGATATCATTGTGGATCTTACGGGTTTAGAggcttttttctttctttctcactgcTATCCTGAACCTTGGCTGATGTGCCACAACTATTGCAGCCGTCACTGCAGcggtcccctctcctctctctggacaGAGCTCTCTATGCCACTCAATGAATGGATATGCACCGGCTCAGTGGGAGATCTCTGCTTTGTTGTCCTTTGAATCACTGATTTGTTTCTCACGaAACCATGGTGAGCAAGGAAAACAGCAAGGTCGTGCTATCCAACTCAGAGTCCGATTCAGAGGCAGGCCCGTCACAAAGCCTGGAGGTGCAGTACGGTCCTGACGGCAAACAGCAGGTGAAGAAGAGGAACAAAGCCTTACAAGTCCGCTTCAAGGACATATGTGACGCCCAGAAGGAGCAGCGGGCAGGGGGGCGAGGAGCCCGGTCCATTTCCTGTAAAGTGGCTTACAGGAAGTACATGACGATGCCTGCGCGGCGCTCCATCCCCAATGTGACTAAGAGCACAGGTGTCCAGACGTCACCGGACCTTACGAAACACTACCAGACTTTCCCCTTCGAGCGAAAGAAAGGACATACGATCAAACACACAGCCTTGGTGGAGGACTACAAGGGCCAGAACAACGGGTTTTTGAGTGACTTGAAAGGGCAGGAGGAGGCGCTGGGTTTAGAGGAGTGCTCGTCTTCTCAGGGTGCAGGGAAGCATGTGCGGCAGACGCAAGCACTGCTCCACCACACGGACGACAGCAGTGGCACAGAGGATCTGTTATCCATTGCCAACTGTGTAGATGGGCGTGCGTGCCCGGACTCCTCTCGCATCACAAAGGACACAGAATGCTTTGCAAACGACCCAACTCCCAGGGGAGAGCCAGAGAACCCTGCCTATGGCGCGAGGACCAAACACAAAGGATTATCCAAAGCGGACACAATGGGTGCCAACCCTTCTGCCAAGCGCCAGCTGGCCAACTGTGAGGAACCCTTACAGGACTCAAGGTCAAAGGTCACAAGTCCAGTTGCCTGGAACTCCCTGACGCAAGTGGAAGGTCTAGGCCTAGGGAGTCCGTCGGTGCGCTGCAAACGCAAAAAGGCCATGCAGCCCAATGGACAACAGTCCCAGACACTGCCCCACCCCCACAGTGCTGGCTGCTCTGTAGCTAGGGTAAAGGCACATCAGTGCCGATCAGGGACTTTACCAACCCCAATGAAACCCCAACCTGGCCTGGACAGCCAGGCATGCCCCCCAGGACGGCAGGGTGCCTGCAAGGAGATAGTGCCCTTAGCTGGGAACGGGGATATTAAAGAAAAGCTCCAGGCCATGGAAAACCTCATCAGCTCCAGTCAGGAGACCATCAAAGTCTTACTGGGGGTCATCCAAGAGCTGGAGAAGGGCGAGGCTCAGAGAGAAGGGCTTTCCTACcgaacaggacaggacacagcCAACTGCGACACGTGTCGAAACAGTGCCTGCATCATTTATAGtgtggaGCTGGACTTCAAGCAGCAGGAGGACAAATTACAGCCCCTGATTAAGAGACTGTGCCCCTTGGACGACCCTCAATACCCTGCTCTGCCTTACCCCCACGAGGTGTTCACCTCAACCCCCAAACGCAAGTCCAAGACAGAGTCCAAAAAGCATGGTCGCTGGAAACTCTGGTTCCTATAATTTAGGGAACACTTTGGATTTTGGAGATGCCTTTTGGATCAGTTTTTACCCATTTACTATCTTCTCTCAAAGGGATTTATCAGAACAGATTTTTTGCTCCAGAGGACAGATAACCAGATACCAgtaaacctacagtatatcagGGTTCTGAGTTGGAACTGCACTAGAaatcaatgggggggggggggtaaaaaaaaaagatatatatattttctcatgGAGGTTTAGAGTCTGCCAAGACTTCAGTTTCTGGCTCAAACACCAGAGAAGATCAACTTATACCCTGGCTAGAGGTTAGCAAAACAACAAGAGACCTCTGCTTGAGTAGAAGAGGAATCACCATGTGGAAGGCCTGTTTCTCTACAAAGCTACTTTAACCGTACATCAGCCTGTCGGCAAAGCACAAACATTTGGATACTGAGATGGAAGAAgaagttatatacagtacattacagtatattagTGAACCAACTCTACATTAACCCTTCTTGCCCCTTCTCTCCAGTCTTGAGAGAAcccaatctctgtctctctctatcccctcgcactctctcccctctctctctgtctctctttcccccctctctctctctctctcacccctctctccttctcttccatctctctctc
>XM_021611421.2
GGACATGATAAGGAGCTCTTTACTGTTGCTGCATGAGCTCACCAGCTGTGGCGACTCTGGACTTTCCCCAACAGCTTGCactatccccctctctcaccctccctgtcactcaccctcactctctctcaccctcactttctctcaccctcactcttcccctctctctctctctctctctttctctcactcactcacactcccaaATGCACAGGGATTGCAGCAGCGCGAGATGGAGATCTCCACTGCGTGTGTGAGTGCCTATTGCCGGTGAGTGCAGGAACGGCAGCAGTGTCAGTGGTGCTTGagtgaggggaaagagagagagagaggcagagagagggagagaagtgggGGATATCATTGTGGATCTTACGGGTTTAGAggcttttttctttctttctcactgcTATCCTGAACCTTGGCTGATGTGCCACAACTATTGCAGCCGTCACTGCAGcggtcccctctcctctctctggacaGAGCTCTCTATGCCACTCAATGAATGGATATGCACCGGCTCAGTGGGAGATCTCTGCTTTGTTGTCCTTTGAATCACTGATTTGTTTCTCACGaAACCATGGTGAGCAAGGAAAACAGCAAGGTCGTGCTATCCAACTCAGAGTCCGATTCAGAGGCAGGCCCGTCACAAAGCCTGGAGGTGCAGTACGGTCCTGACGGCAAACAGCAGGTGAAGAAGAGGAACAAAGCCTTACAAGTCCGCTTCAAGGACATATGTGACGCCCAGAAGGAGCAGCGGGCAGGGGGGCGAGGAGCCCGGTCCATTTCCTGTAAAGTGGCTTACAGGAAGTACATGACGATGCCTGCGCGGCGCTCCATCCCCAATGTGACTAAGAGCACAGGTGTCCAGACGTCACCGGACCTTACGAAACACTACCAGACTTTCCCCTTCGAGCGAAAGAAAGGACATACGATCAAACACACAGCCTTGGTGGAGGACTACAAGGGCCAGAACAACGGGTTTTTGAGTGACTTGAAAGGGCAGGAGGAGGCGCTGGGTTTAGAGGAGTGCTCGTCTTCTCAGGGTGCAGGGAAGCATGTGCGGCAGACGCAAGCACTGCTCCACCACACGGACGACAGCAGTGGCACAGAGGATCTGTTATCCATTGCCAACTGTGTAGATGGGCGTGCGTGCCCGGACTCCTCTCGCATCACAAAGGACACAGAATGCTTTGCAAACGACCCAACTCCCAGGGGAGAGCCAGAGAACCCTGCCTATGGCGCGAGGACCAAACACAAAGGATTATCCAAAGCGGACACAATGGGTGCCAACCCTTCTGCCAAGCGCCAGCTGGCCAACTGTGAGGAACCCTTACAGGACTCAAGGTCAAAGGTCACAAGTCCAGTTGCCTGGAACTCCCTGACGCAAGTGGAAGGTCTAGGCCTAGGGAGTCCGTCGGTGCGCTGCAAACGCAAAAAGGCCATGCAGCCCAATGGACAACAGTCCCAGACACTGCCCCACCCCCACAGTGCTGGCTGCTCTGTAGCTAGGGTAAAGGCACATCAGTGCCGATCAGGGACTTTACCAACCCCAATGAAACCCCAACCTGGCCTGGACAGCCAGGCATGCCCCCCAGGACGGCAGGGTGCCTGCAAGGAGATAGTGCCCTTAGCTGGGAACGGGGATATTAAAGAAAAGCTCCAGGCCATGGAAAACCTCATCAGCTCCAGTCAGGAGACCATCAAAGTCTTACTGGGGGTCATCCAAGAGCTGGAGAAGGGCGAGGCTCAGAGAGAAGGGCTTTCCTACcgaacaggacaggacacagcCAACTGCGACACGTGTCGAAACAGTGCCTGCATCATTTATAGtgtggaGCTGGACTTCAAGCAGCAGGAGGACAAATTACAGCCCCTGATTAAGAGACTGTGCCCCTTGGACGACCCTCAATACCCTGCTCTGCCTTACCCCCACGAGGTGTTCACCTCAACCCCCAAACGCAAGTCCAAGACAGAGTCCAAAAAGCATGGTCGCTGGAAACTCTGGTTCCTATAATTTAGGGAACACTTTGGATTTTGGAGATGCCTTTTGGATCAGTTTTTACCCATTTACTATCTTCTCTCAAAGGGATTTATCAGAACAGATTTTTTGCTCCAGAGGACAGATAACCAGATACCAgtaaacctacagtatatcagGGTTCTGAGTTGGAACTGCACTAGAaatcaatgggggggggggggtaaaaaaaaaagatatatatattttctcatgGAGGTTTAGAGTCTGCCAAGACTTCAGTTTCTGGCTCAAACACCAGAGAAGATCAACTTATACCCTGGCTAGAGGTTAGCAAAACAACAAGGTGAGACTGGATATATTTAGGTCGTCTTGAGATGTAGCCTACAATATGAAGACGGATGTTATTTATTTACTGGGCAAATGCTTCTCTCACTTTTTTATTTATGAATTCCAATGGCACACCTTTTTGGTCTCTTTCCCCAGAGACCTCTGCTTGAGTAGAAGAGGAATCACCATGTGGAAGGCCTGTTTCTCTACAAAGCTACTTTAACCGTACATCAGCCTGTCGGCAAAGCACAAACATTTGGATACTGAGATGGAAGAAgaagttatatacagtacattacagtatattagTGAACCAACTCTACATTAACCCTTCTTGCCCCTTCTCTCCAGTCTTGAGAGAAcccaatctctgtctctctctatcccctcgcactctctcccctctctctctgtctctctttcccccctctctctctctctctcacccctctctccttctcttccatctctctctct

Function

NR:

description
protein FAM196A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052852.1 False 2647 mRNA 0.52 5 74682034 74709285
XM_021611421.2 True 2788 mRNA 0.51 4 74682034 74709286

Neighbor

gene id symbol gene type direction distance location
LOC118966714 NA coding upstream 25170 74656556 ~ 74656864 (+)
ebf3a LOC106577027 coding upstream 339439 74268680 ~ 74342595 (+)
bnip3 bnip3 coding upstream 455269 74218970 ~ 74226765 (+)
LOC110529196 LOC106577022 coding upstream 489614 74190060 ~ 74192420 (+)
LOC110529185 mxi1 coding upstream 498335 74171733 ~ 74183699 (+)
c1h10orf90 cssa18h10orf90 coding downstream 83270 74792556 ~ 74812476 (+)
LOC110529328 adam12 coding downstream 108421 74817707 ~ 74965855 (+)
LOC110529343 LOC106577035 coding downstream 265949 74975235 ~ 74981532 (+)
LOC110529380 LOC106577038 coding downstream 287497 74996783 ~ 75112403 (+)
LOC110529425 LOC106577041 coding downstream 445882 75155168 ~ 75182737 (+)
G83588 NA non-coding upstream 9099 74672402 ~ 74672935 (+)
G83548 NA non-coding upstream 36815 74644920 ~ 74645219 (+)
G83471 NA non-coding upstream 81868 74599936 ~ 74600166 (+)
G83436 NA non-coding upstream 104807 74576769 ~ 74577227 (+)
G83405 NA non-coding upstream 125612 74556065 ~ 74556422 (+)
G83668 NA non-coding downstream 20516 74729802 ~ 74730073 (+)
G83673 NA non-coding downstream 25368 74734654 ~ 74734948 (+)
G83683 NA non-coding downstream 31643 74740929 ~ 74741163 (+)
G83713 NA non-coding downstream 49641 74758927 ~ 74759219 (+)
G83760 NA non-coding downstream 89108 74798394 ~ 74798678 (+)
G82111 LOC106577091 other upstream 1110297 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 3605932 71036440 ~ 71076239 (+)
G78121 NA other upstream 4027073 70571665 ~ 70654961 (+)
G75747 NA other upstream 6307105 68374505 ~ 68374929 (+)
G74139 NA other upstream 7897065 66784335 ~ 66784969 (+)
G83836 NA other downstream 199939 74909225 ~ 74909806 (+)
G83829 NA other downstream 403374 75112660 ~ 75114190 (+)
G83979 NA other downstream 435578 75144864 ~ 75145512 (+)
LOC110529610 NA other downstream 1748838 76457821 ~ 76459823 (+)
G86019 NA other downstream 1922459 76631745 ~ 76635936 (+)

Expression


Co-expression Network