Gene
RNA
| Item | Value |
|---|---|
| gene id | fank1 |
| gene name | fank1 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 74971772 ~ 74975108 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| fank1 | Predicted to be involved in positive regulation of DNA-binding transcription factor activity and regulation of apoptotic process. Located in nucleus. Orthologous to human FANK1 (fibronectin type III and ankyrin repeat domains 1). |
| description |
|---|
| PREDICTED: fibronectin type 3 and ankyrin repeat domains protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021611491.2 | False | 1491 | mRNA | 0.46 | 11 | 74971772 | 74975108 |
| TU92810 | True | 318 | TUCP | 0.56 | 4 | 74972212 | 74973321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529307 | LOC106577031 | coding | downstream | 242926 | 74709330 ~ 74728846 (-) |
| LOC110529277 | ptpre | coding | downstream | 440147 | 74479938 ~ 74531625 (-) |
| gnrh3 | NA | coding | downstream | 493494 | 74477119 ~ 74478278 (-) |
| mgmt | mgmt | coding | downstream | 593618 | 74348790 ~ 74378154 (-) |
| LOC110529206 | ppp2r2d | coding | downstream | 737655 | 74229248 ~ 74234117 (-) |
| edrf1 | LOC106577037 | coding | upstream | 7148 | 74982256 ~ 74996768 (-) |
| LOC110529369 | LOC100380861 | coding | upstream | 137533 | 75112641 ~ 75133272 (-) |
| LOC110529412 | LOC106577039 | coding | upstream | 159971 | 75135010 ~ 75148790 (-) |
| LOC110522123 | LOC106577094 | coding | upstream | 370005 | 75345113 ~ 75348344 (-) |
| LOC110529482 | LOC106577043 | coding | upstream | 516908 | 75492016 ~ 75494664 (-) |
| G84102 | NA | non-coding | downstream | 35372 | 74936200 ~ 74936400 (-) |
| G84095 | NA | non-coding | downstream | 45123 | 74926414 ~ 74926649 (-) |
| G84094 | NA | non-coding | downstream | 45584 | 74925949 ~ 74926188 (-) |
| G84092 | NA | non-coding | downstream | 51149 | 74920369 ~ 74920623 (-) |
| G84087 | NA | non-coding | downstream | 58066 | 74913462 ~ 74913706 (-) |
| G84231 | LOC106577038 | non-coding | upstream | 131266 | 75106374 ~ 75107397 (-) |
| G84240 | NA | non-coding | upstream | 167395 | 75142503 ~ 75142712 (-) |
| G84241 | NA | non-coding | upstream | 168048 | 75143156 ~ 75143547 (-) |
| G84244 | NA | non-coding | upstream | 176086 | 75151194 ~ 75151400 (-) |
| G83429 | NA | other | downstream | 398983 | 74572447 ~ 74572789 (-) |
| LOC110528794 | LOC106576993 | other | downstream | 2719854 | 72202814 ~ 72251918 (-) |
| G80957 | NA | other | downstream | 2760683 | 72207929 ~ 72211089 (-) |
| G79904 | NA | other | downstream | 3227963 | 71743045 ~ 71743809 (-) |
| G79700 | NA | other | downstream | 3501313 | 71469435 ~ 71470755 (-) |
| G84713 | NA | other | upstream | 553235 | 75528343 ~ 75528903 (-) |
| G85866 | NA | other | upstream | 1358360 | 76333468 ~ 76334136 (-) |
| ccser2a | ccser2 | other | upstream | 1392185 | 76324531 ~ 76399997 (-) |
| G86063 | NA | other | upstream | 1545977 | 76516251 ~ 76523481 (-) |
| G86132 | LOC106577062 | other | upstream | 1631574 | 76606682 ~ 76608354 (-) |
