LOC110529369 (LOC100380861)


Basic Information

Item Value
gene id LOC110529369
gene name LOC100380861
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 75112641 ~ 75133272 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611511.2
catgaaacaaacGCAATGGTGGCTCcgggaatggagtgtaatgtaaTAATAGTCCGTTGTTCATAATGTCAGCAAAAACGGTGAAAATGAATGACTGTTTCATATTTTGACATTGGAGACTGCTGTGATCAAGCTTTTTAACTATTGGCAACGAAAGACGTATCTCATAGGCCAACAGGAGGAAAACAGACAAACTATCCAATCAGCTTGGCTGTTGGATCCAGGTGGTAAATTCTCCTGCTTCTCTCTGgagtgtatttttttgtattttccagCTTCCCCTACGCCGCCATTAAATACCAACAGAACGGTTGTTGGAAATGGGGATTAAAATGATTTAAAGCCCCGGAGAGACGGCAAAGGGACGGGGGGAGGGACGGGGGGGGTTGTTGTACAATTGCATAGGTCTCGGAGCACGGAAAGGTAAATATGAGGCTTCTGACCAAATAAAAGATTGACTTCGGGACATACGGATTGGGTTTCTTTGGGAAGGCTCGAGTGGATAGAACCGGGGACAAGCTCGAGAACGGTTTGGTTGTGCTTGAAAGAGGAGTGTCAACACAGGAAAAGCATCCTGCTTGCCTGTGTGATCTCCTTGAGTGGAGCTGTGGTGCTGAGCCCCTCCCAGCGGCAGCCTCTCCCAGCGTTGGAGCGACAATGACCGAGCTGGGTACCAAGTGGGCCTGTGAGTACTGCACGTTTGAGAACTGGCCCTCGGCCATCAAGTGCACCATGTGCCGCGCCCAGAGGCCCAGCGGGGGCGCCATCATCACTGAGGAGCCCTTCCGGAGCAGCCCCGGCCTGGATACCAGCCGCCAGTGGGAACCCCCAAGCCTGAGTAACAGCCCGCCCAAGGGAGGCTCTAGCCTCCTAATCTGCCCAGACTCCAGCGCCCGTCCCCGTGTCCGCATTGCAGACACCCCCGAGACCCCCTCCAGCAAGTGGTCATGCCACATTTGCACCTACCTAAATTGGCCCCGTGCCATCCGCTGCACCCAGTGTCTGTGCCAGCGACATCGGCAGGAGCAGCACCACCATGGACTGGCACAGCAGCCATGCAGCCCCACCGAGTCACCCCAGACCTCAGGCTCAGGATGCCGGACCGCACCCCCCTCTACCCCTACCGACCCCTGCGAGGAGTATAACGACCGCAACCGCCTCAACACCCGCGCCCAGCACTGGACCTGTGCCGCCTGCACTTATGCAAACTGGCCCAATGCGTGCAAATGTGTAGTGTGTGACCACCCTAGGCCCAATAGCCTGACAGAACCTATCGAACTGGCCTCTGAGCCAGAGAGCCTACCACCCTccatactcaatgagcaggacaGGGACAACAGGAGGGGGGGTTTGGGAGGGGGCGGCGGTGGAGTAGTGGGGTGCAGTGGCGGCCAGAGGAGGTCCCCACCCACCTCCAAGCGGGAGGCGGAGGTTAAAATGGACTTTCAGAGGATCGAACTGGCTTCGGGAGCCGGAGTGGGGAGCATAGAGGAGCAGCAGGTGGACTTTAAAAGGCTCAAACAGATAAAGAACAGGATGAGGAGAACTGACTGGTTGTTTCTCAATGCCTGTGCAGGTGTGGTAGAGGGGGACCTGGCTGCAGTAGAGGCCTATAAGTCATCAGGGGGGGACATCGCCAGGCAGCTGACGTCCGACGAGGTGCGTCTCCTCAACCGGTCATCGGCCTTCGACGACGGCTTCACCCTGGTACACCTGGCCATCCGCTTCCAGAGGCAGGACATGCTGGCAGTGCTCCTCACTGAGGTGTCCCAGCAGGCAGCTAAGTGTATCCCAGCCATGGTGTGCCCTGAGCTGACGGAGCAGATCCGTCGGGAGGTGGCTGCCTCCCTGCACCAGCGCAAGGGAGACTTCACCTGCTACTTTCTCACTGACCTGGTCACCTTCACCCTGCCAGCAGATATTGAGGACTTGCCCCCAACAGTTCAGGAGAAACTGTTTGACGAAGTGCTGGACCGAGATGTACAGAAAGagctggAGGAGGAGTCTCCCATCATCAACTGGTCTATAGAGCTAGGCACACGGTTGGACAGCAGGCTGTATGCCCTGTGGAACCGCACGGCCGGGGACTGCCTGTTAGACTCAGTACTGCAGGCCACTTGGGGCATCTATGACAAGGACTCTGTCCTCCGCAAGACCCTTCACGACAGCCTGCATGACTGCTCCCACTGGTTCTATACACGCTGGAAGGAGTGGGAGTCGTGGTACTCCCAGAGCTTCGGCTTGCACTTCTCACTCAGAGAGGAACAGTGGCAGGAAGATTGGGCTTTCATTCTCTCACTGGCCAGccagcCTGGAGCCAGCCTGGAGCAGACTCATATTTTTGTTCTTGCACACATTCTTCGTAGACCAATCATCGTCTATGGAGTGAAGTATTACAAAAGTTTCCGTGGTGAAACACTTGGGTACACCCGTTTTCAAGgtGTGTACTTGCCCCTGTTGTGGGAGCAGAGTTTCTGTTGGAAGAGTCCCATTGCGCTGGGCTACACGCGTGGCCACTTCTCTGCACTGGTGGCCATGGAGAACGACGGCTTCGACAATCGGGGTGCAGGCGCCAACCTCAACACAGACGACGACGTCACCGTCACCTTCCTACCGCTGGTGGACAGCGAGAGAAAATTGCTCCACATCCACTTCCTCTCAGCACAGGAGatGGGTAATGAAGAGCAGCAGGAGAAGCTGCTGAGAGAGTGGTTGGACTGCTGCGTGACGGAGGGCGGAGTGCTGGTGGCCATGCAGAAGAGCTCCCGCAGGCGGAACCACCCCCTGGTCACACAGATGGTGGAGAAGTGGCTGGACGGCTACCGACAGATCCGCCCCTGCGCCTCGCTCTCCGACggcgaggaagaggaggaggaggatgagtgaCAAATCGGGTATAGGCGGGATCCCCAGAGGCAGGGGTCCAGCCTcgttttttttttccccccctttcCTGACACGGACAAACTGAAAGGGGAGGGAATCCTGAGCCTCACCGCACCCTGGCAGAGGACACATACGAATATCTTAGACTGACAGAAGAAATGGTCCACTGCTGCAAAAAGACCTGGGGATGATGGGAAATAAAGGATTATAGTATACTAATGCTATTTATCTTTATTGATTTTCTAATGTAAAATCTTTATCCAAAAGTGTAAATGCATGTGGTTGTTTAAAAAAAGAAGTATAAGGAAATATACCAGCATCGATTCAAACATCTTTCTGTTCATTATGGGCACTGACGAAGCACACTTACTGTTGTTTTTCCAGTTGAAATAGTTGGCTTGTTTTTTTTGATGGGCAGTGACTAAGCCAACATATCTTTGAGTCATGGGACCCAATGGAGAACTGGCTCGATTGTGTAATATGAACTTAATTCTTAATACTAAGCACTGCACATTTATTGAAAGACATTTCTATATGAATATAACTGCTTGAATAAAGGTAATTTATTAATCTTTGAAATGGCAGTTCAAAGTCACTAAGGTTTAGGAGACAGATCATACACATGGATGTTTAGTTTACCTTTTTTTCCGACTGGCTGAAATGAAATGTCTTGTTTTTAATTTAATCTCCAAACCAATTTTACATGTTTATTTGTTTGGGAGCTTTTGAGCTAAGGAGAGCTTTGATTCTCTGTATTTTTCTTtcatttattatttaaaaaatattttttaggcTGCACTAACATTTTTGCGGTGAGGAAAATAACAACCATCTGTAAAAGTTGACTTCAGTTCTCGTGTGATTCAGTATCTCATTTGAATGGTTGGTGATTTTTGGGAGGAGAGAGTAAGACATTCAAAGTCAACATTAAACCAGAAACGCACCAGTTTCTTGTCATATTCTCATATTATTCCTCCCTGTCAAGTTTAACCCATGGTACCTGTGTTTTATTTTTCTCTAATGTATATGTGAACATCTTGAATTGAGTTTAAGGTCTTTGTGAGAGACTGCACATAAACCAAAGTTGTAAAATCATGCTTTAGCAGTGAAGGAAGTTTCTGTTGGGTTTCCTTGCCGTTGAGTACTGTAACTTTTATTTTGGTGTATTACAATCTAGTTATACACATTTTGAGCATCACCTGTATGTTGCTTTGTATTTATGCAATAGTTGCAGATCTGACTATGATGGTTTGTGGATTTAGGTAAAAGCCTGACCTCGCTTTAGCGTGTGTGGCACGGACaggaaaaataaaggaaaacctttTTAATGTCCAATTA
>XM_036985373.1
acatgaaacaaacGCAATGGTGGCTCcgggaatggagtgtaatgtaaTAATAGTCCGTTGTTCATAATGTCAGCAAAAACGGTGAAAATGAATGACTGTTTCATATTTTGACATTGGAGACTGCTGTGATCAAGCTTTTTAACTATTGGCAACGAAAGACGTATCTCATAGGCCAACAGGAGGAAAACAGACAAACTATCCAATCAGCTTGGCTGTTGGATCCAGGTGGTAAATTCTCCTGCTTCTCTCTGgagtgtatttttttgtattttccagCTTCCCCTACGCCGCCATTAAATACCAACAGAACGGTTGTTGGAAATGGGGATTAAAATGATTTAAAGCCCCGGAGAGACGGCAAAGGGACGGGGGGAGGGACGGGGGGGGTTGTTGTACAATTGCATAGGTCTCGGAGCACGGAAAGGTAAATATGAGGCTTCTGACCAAATAAAAGATTGACTTCGGGACATACGGATTGGGTTTCTTTGGGAAGGCTCGAGTGGATAGAACCGGGGACAAGCTCGAGAACGGTTTGGTTGTGCTTGAAAGAGGAGTGTCAACACAGGAAAAGCATCCTGCTTGCCTGTGTGATCTCCTTGAGTGGAGCTGTGGTGCTGAGCCCCTCCCAGCGGCAGCCTCTCCCAGCGTTGGAGCGACAATGACCGAGCTGGGTACCAAGTGGGCCTGTGAGTACTGCACGTTTGAGAACTGGCCCTCGGCCATCAAGTGCACCATGTGCCGCGCCCAGAGGCCCAGCGGGGGCGCCATCATCACTGAGGAGCCCTTCCGGAGCAGCCCCGGCCTGGATACCAGCCGCCAGTGGGAACCCCCAAGCCTGAGTAACAGCCCGCCCAAGGGAGGCTCTAGCCTCCTAATCTGCCCAGACTCCAGCGCCCGTCCCCGTGTCCGCATTGCAGACACCCCCGAGACCCCCTCCAGCAAGTGGTCATGCCACATTTGCACCTACCTAAATTGGCCCCGTGCCATCCGCTGCACCCAGTGTCTGTGCCAGCGACATCGGCAGGAGCAGCACCACCATGGACTGGCACAGCAGCCATGCAGCCCCACCGAGTCACCCCAGACCTCAGGCTCAGGATGCCGGACCGCACCCCCCTCTACCCCTACCGACCCCTGCGAGGAGTATAACGACCGCAACCGCCTCAACACCCGCGCCCAGCACTGGACCTGTGCCGCCTGCACTTATGCAAACTGGCCCAATGCGTGCAAATGTGTAGTGTGTGACCACCCTAGGCCCAATAGCCTGACAGAACCTATCGAACTGGCCTCTGAGCCAGAGAGCCTACCACCCTccatactcaatgagcaggacaGGGACAACAGGAGGGGGGGTTTGGGAGGGGGCGGCGGTGGAGTAGTGGGGTGCAGTGGCGGCCAGAGGAGGTCCCCACCCACCTCCAAGCGGGAGGCGGAGGTTAAAATGGACTTTCAGAGGATCGAACTGGCTTCGGGAGCCGGAGTGGGGAGCATAGAGGAGCAGCAGGTGGACTTTAAAAGGCTCAAACAGATAAAGAACAGGATGAGGAGAACTGACTGGTTGTTTCTCAATGCCTGTGCAGGTGTGGTAGAGGGGGACCTGGCTGCAGTAGAGGCCTATAAGTCATCAGGGGGGGACATCGCCAGGCAGCTGACGTCCGACGAGGTGCGTCTCCTCAACCGGTCATCGGCCTTCGACGACGGCTTCACCCTGGTACACCTGGCCATCCGCTTCCAGAGGCAGGACATGCTGGCAGTGCTCCTCACTGAGGTGTCCCAGCAGGCAGCTAAGTGTATCCCAGCCATGGTGTGCCCTGAGCTGACGGAGCAGATCCGTCGGGAGGTGGCTGCCTCCCTGCACCAGCGCAAGGGAGACTTCACCTGCTACTTTCTCACTGACCTGGTCACCTTCACCCTGCCAGCAGagctggAGGAGGAGTCTCCCATCATCAACTGGTCTATAGAGCTAGGCACACGGTTGGACAGCAGGCTGTATGCCCTGTGGAACCGCACGGCCGGGGACTGCCTGTTAGACTCAGTACTGCAGGCCACTTGGGGCATCTATGACAAGGACTCTGTCCTCCGCAAGACCCTTCACGACAGCCTGCATGACTGCTCCCACTGGTTCTATACACGCTGGAAGGAGTGGGAGTCGTGGTACTCCCAGAGCTTCGGCTTGCACTTCTCACTCAGAGAGGAACAGTGGCAGGAAGATTGGGCTTTCATTCTCTCACTGGCCAGccagcCTGGAGCCAGCCTGGAGCAGACTCATATTTTTGTTCTTGCACACATTCTTCGTAGACCAATCATCGTCTATGGAGTGAAGTATTACAAAAGTTTCCGTGGTGAAACACTTGGGTACACCCGTTTTCAAGgtGTGTACTTGCCCCTGTTGTGGGAGCAGAGTTTCTGTTGGAAGAGTCCCATTGCGCTGGGCTACACGCGTGGCCACTTCTCTGCACTGGTGGCCATGGAGAACGACGGCTTCGACAATCGGGGTGCAGGCGCCAACCTCAACACAGACGACGACGTCACCGTCACCTTCCTACCGCTGGTGGACAGCGAGAGAAAATTGCTCCACATCCACTTCCTCTCAGCACAGGAGatGGGTAATGAAGAGCAGCAGGAGAAGCTGCTGAGAGAGTGGTTGGACTGCTGCGTGACGGAGGGCGGAGTGCTGGTGGCCATGCAGAAGAGCTCCCGCAGGCGGAACCACCCCCTGGTCACACAGATGGTGGAGAAGTGGCTGGACGGCTACCGACAGATCCGCCCCTGCGCCTCGCTCTCCGACggcgaggaagaggaggaggaggatgagtgaCAAATCGGGTATAGGCGGGATCCCCAGAGGCAGGGGTCCAGCCTcgttttttttttccccccctttcCTGACACGGACAAACTGAAAGGGGAGGGAATCCTGAGCCTCACCGCACCCTGGCAGAGGACACATACGAATATCTTAGACTGACAGAAGAAATGGTCCACTGCTGCAAAAAGACCTGGGGATGATGGGAAATAAAGGATTATAGTATACTAATGCTATTTATCTTTATTGATTTTCTAATGTAAAATCTTTATCCAAAAGTGTAAATGCATGTGGTTGTTTAAAAAAAGAAGTATAAGGAAATATACCAGCATCGATTCAAACATCTTTCTGTTCATTATGGGCACTGACGAAGCACACTTACTGTTGTTTTTCCAGTTGAAATAGTTGGCTTGTTTTTTTTGATGGGCAGTGACTAAGCCAACATATCTTTGAGTCATGGGACCCAATGGAGAACTGGCTCGATTGTGTAATATGAACTTAATTCTTAATACTAAGCACTGCACATTTATTGAAAGACATTTCTATATGAATATAACTGCTTGAATAAAGGTAATTTATTAATCTTTGAAATGGCAGTTCAAAGTCACTAAGGTTTAGGAGACAGATCATACACATGGATGTTTAGTTTACCTTTTTTTCCGACTGGCTGAAATGAAATGTCTTGTTTTTAATTTAATCTCCAAACCAATTTTACATGTTTATTTGTTTGGGAGCTTTTGAGCTAAGGAGAGCTTTGATTCTCTGTATTTTTCTTtcatttattatttaaaaaatattttttaggcTGCACTAACATTTTTGCGGTGAGGAAAATAACAACCATCTGTAAAAGTTGACTTCAGTTCTCGTGTGATTCAGTATCTCATTTGAATGGTTGGTGATTTTTGGGAGGAGAGAGTAAGACATTCAAAGTCAACATTAAACCAGAAACGCACCAGTTTCTTGTCATATTCTCATATTATTCCTCCCTGTCAAGTTTAACCCATGGTACCTGTGTTTTATTTTTCTCTAATGTATATGTGAACATCTTGAATTGAGTTTAAGGTCTTTGTGAGAGACTGCACATAAACCAAAGTTGTAAAATCATGCTTTAGCAGTGAAGGAAGTTTCTGTTGGGTTTCCTTGCCGTTGAGTACTGTAACTTTTATTTTGGTGTATTACAATCTAGTTATACACATTTTGAGCATCACCTGTATGTTGCTTTGTATTTATGCAATAGTTGCAGATCTGACTATGATGGTTTGTGGATTTAGGTAAAAGCCTGACCTCGCTTTAGCGTGTGTGGCACGGACaggaaaaataaaggaaaacctttTTAATGTCCAATTA

Function

NR:

description
ubiquitin thioesterase Zranb1-like

GO: NA

KEGG:

id description
K11862 ZRANB1, TRABID; ubiquitin thioesterase ZRANB1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611511.2 False 4224 mRNA 0.50 10 75112641 75133271
XM_036985373.1 True 4153 mRNA 0.50 9 75112641 75133272

Neighbor

gene id symbol gene type direction distance location
edrf1 LOC106577037 coding downstream 115873 74982256 ~ 74996768 (-)
fank1 fank1 coding downstream 137533 74971772 ~ 74975108 (-)
LOC110529307 LOC106577031 coding downstream 383795 74709330 ~ 74728846 (-)
LOC110529277 ptpre coding downstream 581016 74479938 ~ 74531625 (-)
gnrh3 NA coding downstream 634363 74477119 ~ 74478278 (-)
LOC110529412 LOC106577039 coding upstream 1807 75135010 ~ 75148790 (-)
LOC110522123 LOC106577094 coding upstream 211841 75345113 ~ 75348344 (-)
LOC110529482 LOC106577043 coding upstream 358744 75492016 ~ 75494664 (-)
LOC110529484 LOC106577044 coding upstream 367438 75500710 ~ 75503281 (-)
LOC110529486 LOC106577095 coding upstream 422873 75556145 ~ 75574946 (-)
G84231 LOC106577038 non-coding downstream 5244 75106374 ~ 75107397 (-)
G84102 NA non-coding downstream 176241 74936200 ~ 74936400 (-)
G84095 NA non-coding downstream 185992 74926414 ~ 74926649 (-)
G84094 NA non-coding downstream 186453 74925949 ~ 74926188 (-)
G84092 NA non-coding downstream 192018 74920369 ~ 74920623 (-)
G84240 NA non-coding upstream 9231 75142503 ~ 75142712 (-)
G84241 NA non-coding upstream 9884 75143156 ~ 75143547 (-)
G84244 NA non-coding upstream 17922 75151194 ~ 75151400 (-)
G84279 NA non-coding upstream 69594 75202866 ~ 75203118 (-)
G83429 NA other downstream 539852 74572447 ~ 74572789 (-)
LOC110528794 LOC106576993 other downstream 2860723 72202814 ~ 72251918 (-)
G80957 NA other downstream 2901552 72207929 ~ 72211089 (-)
G79904 NA other downstream 3368832 71743045 ~ 71743809 (-)
G84713 NA other upstream 395071 75528343 ~ 75528903 (-)
G85866 NA other upstream 1200196 76333468 ~ 76334136 (-)
ccser2a ccser2 other upstream 1234021 76324531 ~ 76399997 (-)
G86063 NA other upstream 1387813 76516251 ~ 76523481 (-)
G86132 LOC106577062 other upstream 1473410 76606682 ~ 76608354 (-)

Expression


Co-expression Network