Item | Value |
---|---|
gene id | LOC110529439 |
gene name | LOC106577042 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 75275985 ~ 75311494 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
carbohydrate sulfotransferase 15-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021611656.2 | False | 3624 | mRNA | 0.46 | 9 | 75275985 | 75311494 |
XM_021611628.2 | False | 3704 | mRNA | 0.48 | 8 | 75298805 | 75311494 |
XM_021611650.2 | False | 2466 | mRNA | 0.50 | 8 | 75298807 | 75310251 |
XM_021611613.2 | False | 3705 | mRNA | 0.48 | 8 | 75298807 | 75311494 |
XM_021611643.2 | False | 3330 | mRNA | 0.48 | 8 | 75298854 | 75311494 |
XM_021611619.2 | True | 4490 | mRNA | 0.46 | 7 | 75298950 | 75311494 |
75,252,000
75,256,000
75,260,000
75,264,000
75,268,000
75,272,000
75,276,000
75,280,000
75,284,000
75,288,000
75,292,000
75,296,000
75,300,000
75,304,000
75,308,000
75,312,000
75,316,000
75,320,000
75,324,000
75,328,000
NC_048565.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110532673 | LOC106577093 | coding | upstream | 41997 | 75230738 ~ 75233988 (+) |
LOC110529425 | LOC106577041 | coding | upstream | 93248 | 75155168 ~ 75182737 (+) |
LOC110529380 | LOC106577038 | coding | upstream | 163582 | 74996783 ~ 75112403 (+) |
LOC110529343 | LOC106577035 | coding | upstream | 294453 | 74975235 ~ 74981532 (+) |
LOC110529328 | adam12 | coding | upstream | 310130 | 74817707 ~ 74965855 (+) |
LOC110529485 | LOC106577045 | coding | downstream | 223508 | 75535002 ~ 75539343 (+) |
LOC110529500 | LOC106577048 | coding | downstream | 303723 | 75615217 ~ 75648612 (+) |
LOC110529506 | LOC106577049 | coding | downstream | 345093 | 75656587 ~ 75693011 (+) |
LOC110529516 | LOC106577050 | coding | downstream | 383938 | 75695432 ~ 75724153 (+) |
LOC110532683 | LOC106577051 | coding | downstream | 522437 | 75833931 ~ 76177978 (+) |
G84292 | NA | non-coding | upstream | 61352 | 75214283 ~ 75214633 (+) |
G84291 | NA | non-coding | upstream | 62443 | 75213321 ~ 75213542 (+) |
G84285 | NA | non-coding | upstream | 69763 | 75205969 ~ 75206222 (+) |
G83982 | NA | non-coding | upstream | 128812 | 75146956 ~ 75147173 (+) |
G83981 | NA | non-coding | upstream | 129325 | 75146207 ~ 75146660 (+) |
G84507 | NA | non-coding | downstream | 72381 | 75383875 ~ 75384125 (+) |
G84509 | NA | non-coding | downstream | 72777 | 75384271 ~ 75384504 (+) |
G84544 | NA | non-coding | downstream | 98579 | 75410073 ~ 75410272 (+) |
G84547 | NA | non-coding | downstream | 101748 | 75413242 ~ 75413574 (+) |
G84555 | NA | non-coding | downstream | 105604 | 75417098 ~ 75417406 (+) |
G83979 | NA | other | upstream | 130473 | 75144864 ~ 75145512 (+) |
G83829 | NA | other | upstream | 161795 | 75112660 ~ 75114190 (+) |
G83836 | NA | other | upstream | 366179 | 74909225 ~ 74909806 (+) |
G82111 | LOC106577091 | other | upstream | 1704248 | 73551616 ~ 73571737 (+) |
ccdc85a | ccdc85a | other | upstream | 4199883 | 71036440 ~ 71076239 (+) |
LOC110529610 | NA | other | downstream | 1146630 | 76457821 ~ 76459823 (+) |
G86019 | NA | other | downstream | 1320251 | 76631745 ~ 76635936 (+) |
G86614 | NA | other | downstream | 1812441 | 77123935 ~ 77124427 (+) |
G87159 | NA | other | downstream | 2258521 | 77570015 ~ 77570470 (+) |
G89667 | NA | other | downstream | 4237523 | 79549017 ~ 79549651 (+) |