LOC110522123 (LOC106577094)


Basic Information

Item Value
gene id LOC110522123
gene name LOC106577094
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 75345113 ~ 75348344 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600288.2
CTGCGCTGGGCGTTTGCAAAACTGTCCACCAGTACACTACGCAATTGCGCAATAAGGGGATGTTGTGCGAGCAGTGGCAAGAAATAAATAGTTAGAAACTTAGTGCAGCCACACGTGCAGGGGTGTGTCTGTTTGTAATCACCCGTTCCTGGAGACATTTGGTTCAGCACATCGAGGATACTTGGATGTCCCTTCGTGCGACTCTCCATAGTGAGCCGGCTGTATCGTTACATGGAGACACGAGAAGGACAACGAAGAATAACCGTGGAACTGTGTCGGATGTTTGCTGGTTGGACATCGTAGTTCCAGCACGATGCTATATGTAATTTGTTTCAGAAGCTGGACGGTGGATACAATTGTCAAAAGTGCGGATATTTGAGCGGGACGCACGCACAATGCACATTGCGGACatggctgtctctgtgtttgtagtAGTGATCATCGCCGTCTCGTTTCTGTCCAACGTGGTGGTACTGATCTGCTTTCTGTACAACCAGGAGATTCGAAAGCAGGTGCCCGGGTTGTTTATCCTCAACCTAACCGTCTGCAACCTGTTGCTTACCGTGTCCAATATGCCTCTAACTCTGGTCGGACTTATCAACAAAGGAAACACTGGAGGCAGCGGGTTCTGTCAAACTGTGGGTTTCCTGGACACTTTTCTCACCACCAACTCAATGCTCAGTATGGGGGCTTTGAGCATCGATCGATGGGTGGCAGTGGTTTTTCCGCTGAGCTACCACTCCAGAATACGACACCGGGACGCAGTGATAGGGCTTGGATACACGTGGATGCACTCGCTCTCGTTCTCCACGGTGGCCACTTGCTCTTCCTGGGTTGGGTACCATCACATTTACGCATCATGTACGCTCTGCAATGCGAGAGCAAGCGGCTCCCGGACGCAGTTTATCATCTACACTGTGGTGTTACACTCTCTCACGTTTCTCTTGACCTTAATCGTGTTGTGTGTAACGTACCTGAAAGTTCTGAAAGTTGCGCGGTTTCACTGTAAACGCATCGACGTGATCACTATGCAGACCTTATTGCTGCTTGTGGATATTCACCCGAGTGTGCGCCAGCGATGCCTGGATGAGCAGAGACAGCGGAGGCAGAGAGCCACCAAGAAGATCATCACATTCATTGGAACGTTTGTGGTGTGCTTCGCCCCTTACGTCATCACGAGAATCTTCGAGCTCTTCACGCTAGGACAGATAAACCCTCACTGGGGTGTCTTGTCTAAGTGTTTGGCCTACAGCAAGGCAGCCTGCGACCCTTTTGTCTACTCACTGCTCCGGAACCAGTACAGGAAGACATGCAGCGACCTGACCAACAAGATCCTGAAGAGAAGTTCCTTTAACTCCTCCGCCCGCATGGTGGAGAACGGAAGGGTCAACGACACCAACAACTTCAAACCCACCCATTGA

Function

NR:

description
G-protein coupled receptor 26-like

GO: NA

KEGG:

id description
K08411 GPR26; G protein-coupled receptor 26

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600288.2 True 1421 mRNA 0.51 3 75345113 75348344

Neighbor

gene id symbol gene type direction distance location
LOC110529412 LOC106577039 coding downstream 196323 75135010 ~ 75148790 (-)
LOC110529369 LOC100380861 coding downstream 211841 75112641 ~ 75133272 (-)
edrf1 LOC106577037 coding downstream 348345 74982256 ~ 74996768 (-)
fank1 fank1 coding downstream 370005 74971772 ~ 74975108 (-)
LOC110529307 LOC106577031 coding downstream 616267 74709330 ~ 74728846 (-)
LOC110529482 LOC106577043 coding upstream 143672 75492016 ~ 75494664 (-)
LOC110529484 LOC106577044 coding upstream 152366 75500710 ~ 75503281 (-)
LOC110529486 LOC106577095 coding upstream 207801 75556145 ~ 75574946 (-)
vkorc1 LOC106577046 coding upstream 261003 75609347 ~ 75612396 (-)
ccser2a ccser2 coding upstream 976187 76324531 ~ 76399997 (-)
G84407 NA non-coding downstream 88796 75256005 ~ 75256317 (-)
G84325 NA non-coding downstream 105697 75238675 ~ 75239416 (-)
G84305 NA non-coding downstream 119088 75225712 ~ 75226025 (-)
G84302 NA non-coding downstream 121823 75223062 ~ 75223290 (-)
G84289 NA non-coding downstream 133453 75211261 ~ 75211660 (-)
G84510 NA non-coding upstream 36963 75385307 ~ 75385519 (-)
G84518 NA non-coding upstream 46099 75394443 ~ 75394676 (-)
G84546 NA non-coding upstream 64493 75412837 ~ 75413050 (-)
G84551 NA non-coding upstream 65986 75414330 ~ 75414666 (-)
G84701 NA non-coding upstream 173951 75522295 ~ 75522527 (-)
G83429 NA other downstream 772324 74572447 ~ 74572789 (-)
LOC110528794 LOC106576993 other downstream 3093195 72202814 ~ 72251918 (-)
G80957 NA other downstream 3134024 72207929 ~ 72211089 (-)
G79904 NA other downstream 3601304 71743045 ~ 71743809 (-)
G84713 NA other upstream 179999 75528343 ~ 75528903 (-)
G85866 NA other upstream 985124 76333468 ~ 76334136 (-)
G86063 NA other upstream 1172741 76516251 ~ 76523481 (-)
G86132 LOC106577062 other upstream 1258338 76606682 ~ 76608354 (-)

Expression


Co-expression Network