LOC110529486 (LOC106577095)


Basic Information

Item Value
gene id LOC110529486
gene name LOC106577095
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 75556145 ~ 75574946 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611717.2
AATGTAGACCAACAAGGAAATAAAGTTGAGTGATTAGAAGAACAAAAGAAGAGGGTGTAGTGTGTGGGGTGTCATAAGGGAGGGGTGTAGGCAATGAAGGATAGCATGAGGGATATTTAAAGAGCAAATACATGGGCTTTGTACATAACACTTAAGAAATGTCTGTGAAGAAATTGGTATGTTTATTGACGGTGGCAAGTCTCCTAATTCAAGAATCATATTGTCAACTTGATGTGTGTGGGACCACTTCATTCAACAACAAAATAGTGGGGGGTGAGGATGCCCCTGCAGGAAGTTGGCCCTGGCAGGCTAGCGTACACCAATTTGGTGGCCATGTTTGTGGCGGGTCCCTCATCAACAAGGAGTGGGTGATGTCTGCAGCCCACTGCTTTTCTGGCTCAAGCCCAAATGATTGGAACATCATCTTAGGTCGACAGAACCAGGAGGGCAGTAACCCCAACGAAGTGTCCAGAACTGTTGCTCAGATCGTCTTACATCCAGTTTACGACAGTGACACCAATGACAACGACATTGCTCTGCTCAGACTCACCTCACAAGTCAACTTCACAAACTATATCAGACCCGTCTGTCTGGCAGCAAGTGACAGTTTTTACCACAATGGAACTGATAGCTGGGTCACTGGCTGGGGCAAAATCAACGAAGGAAaattcctcccctcccctcgggcTCTGCAGGAAGTGGAGGTTCCAGTTCTGGGTAATAGACAGTGTAACTGCCTCAATGGGGTCGGCTCAGTCACAGACAACATGCTTTGTGCTGGTGTACTGACAGGGGGCAAGGACTCATGTCAGGGTGACTCTGGAGGTCCAATGGTGGCCAAACAGAACTCTGTCTGGATCCAGTCTGGGGTTGTGAGCTGGGGTTTTGGCTGCGCTCGGCCCAATCTCCCTGGGGTGTACACCAGAGTGTCTCGCTACCAGCCCTGGATCGACTCCAAGATCACTACCGACAAGCCAGGCTTTGTCCAGTTTACCTCCAGTGGGGTAGATACTGACAGCAGTTACACATGTCCTGGCCTACCACCTCCTGCTACAAATGTACCAACTAAACAACaactaaaaacaacaacaactaaagcACCAGATATCGCTGTCATTTCAACTGCAGAAGGGCGAGTATGTGGCCGTGCTCCTATGAGTCCCTGTCTAGGGGGCAACAGTTATTATGTTGCGGAGGGAACTTGGCCCTGGATGGTCAATCTACACAGAAATGGGATCCATATTTGCAGCGGCACACTTATTACAGAGGAATTTGTCCTTAGTGCTGCCCAATGCTTCCCTGGTTCACATCTAAATCCCGACGAGTGGACTGTGTTTCTGGGAGAGCACAAGCAGAAAGGATCTGATGTCTTTGAGGCTTCATTGGGCATTGTGAACAtcaccctgaccaacctaactGGGACCAACATTGCGCTGCTGCAGCTGGAAAACTTTGTGAATTTCAGCAGCTGCCTTCAGCCTATATGTGTAGACCTGAGCAATGATGGACGTTTCCCACCTGGGACTCAGTGCTGGGTGACAGGCTGGGGAAACCAGGACAAAGGCAAGGTGAACGGCACCACTGGGACGGGTCTATGGGAGCAGCAGGCTAATGTGATGAGCTGTGGCAACATCTCCTCCACTGAGAACATCTGCACTACAGCGATGAACCTGGAACAGGGAGATGTAGGTGGTCCCCTGATGTGTAAGTCTGGGTTGGCATGGTTCCAGGCTGGAGTGATAACAATGAATAAGGATGAAAATGATACCAATTTGCGAGCGACCAAGATGCAGATTTTTTCCAAAACCTCCAGATTCGTGTCCTTTTTTAATAAGATGATCAGTGACTTCCCCACCCCGTCAACAACCACTGTCCCTAACAACACAGGAAATGCAGCCCccagccccctctctctttcactcttattttatttttttctccccaTTCTTGCCATGGTCTTGCTGTCAGGCTGGTAGTTCCTCAATCTCTCTTTTTGGTAGTGTCTACAAAATATATAACTTTATGCACCAGAACCAGGGTAATGAAATTTGAGGATTACATTTGTGGCACCAAAGAAAGAAACTAGCAATTTGACAAATGCGTGAAAGTCAGGAATAATCATACAATGAAACTAATGAAGGTAACACTTTATGTAAAACATTGTTATAACTAATTGGTGGAATCTTTTATGTGAAATAATGTTtttcaagcaaataactgtttaATTGGTACTGATTAATAAACTACCTATAAACCCTTTATAAAGTATTGTATACTTCAATGTAAAGTTCCAGTGAATGATGACATGTTTAACATATCAGTTTTACGGCGGTAATGTACACAAACAAAATAGGTTGGCATATATTATGTTTTTAAAGTAATGTTATCTATTAAATATAATAATtgtatactgtaaaaaaaaaaatgaaaataaatgtttatcAT

Function

NR:

description
transmembrane protease serine 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611717.2 True 2445 mRNA 0.45 10 75556145 75574946

Neighbor

gene id symbol gene type direction distance location
LOC110529484 LOC106577044 coding downstream 52864 75500710 ~ 75503281 (-)
LOC110529482 LOC106577043 coding downstream 61481 75492016 ~ 75494664 (-)
LOC110522123 LOC106577094 coding downstream 207801 75345113 ~ 75348344 (-)
LOC110529412 LOC106577039 coding downstream 407355 75135010 ~ 75148790 (-)
LOC110529369 LOC100380861 coding downstream 422873 75112641 ~ 75133272 (-)
vkorc1 LOC106577046 coding upstream 34401 75609347 ~ 75612396 (-)
ccser2a ccser2 coding upstream 749585 76324531 ~ 76399997 (-)
LOC110529591 fam149b1 coding upstream 869462 76444408 ~ 76452168 (-)
LOC118964475 LOC106577059 coding upstream 891017 76465963 ~ 76467210 (-)
LOC110529704 LOC106577064 coding upstream 1288533 76863479 ~ 76871869 (-)
G84720 LOC106577045 non-coding downstream 18574 75537016 ~ 75537571 (-)
G84721 NA non-coding downstream 20748 75535065 ~ 75535397 (-)
G84717 NA non-coding downstream 23666 75532268 ~ 75532479 (-)
G84704 NA non-coding downstream 31869 75524066 ~ 75524276 (-)
G84701 NA non-coding downstream 33618 75522295 ~ 75522527 (-)
G84779 NA non-coding upstream 17816 75592762 ~ 75593143 (-)
G84798 NA non-coding upstream 29356 75604302 ~ 75604576 (-)
G85001 NA non-coding upstream 159483 75734429 ~ 75734647 (-)
G85035 NA non-coding upstream 209274 75784220 ~ 75784504 (-)
G85036 NA non-coding upstream 209601 75784547 ~ 75784828 (-)
G84713 NA other downstream 27242 75528343 ~ 75528903 (-)
fank1 fank1 other downstream 582824 74971772 ~ 74975108 (-)
G83429 NA other downstream 983356 74572447 ~ 74572789 (-)
LOC110528794 LOC106576993 other downstream 3304227 72202814 ~ 72251918 (-)
G80957 NA other downstream 3345056 72207929 ~ 72211089 (-)
G85866 NA other upstream 758522 76333468 ~ 76334136 (-)
G86063 NA other upstream 946139 76516251 ~ 76523481 (-)
G86132 LOC106577062 other upstream 1031736 76606682 ~ 76608354 (-)
G86448 NA other upstream 1291958 76866904 ~ 76867598 (-)

Expression


Co-expression Network