vkorc1 (LOC106577046)


Basic Information

Item Value
gene id vkorc1
gene name LOC106577046
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 75609347 ~ 75612396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611729.2
TGGGGGACTTTTATTTTTGAAGGCGAACCGTTGATTCCAAATGTTTTGCTCACACTGTCGTTCACGAAACACACCGACTCTCTGACTGGCGACCAGCCGGGATTGAAAAGGTTGTCCGTAGTAGGCTCGAATAACTTAATTGAAAGGCAATAGAACATGGCATCGAATAGTTGCAGTGGAGTTCCCAAATGGGAGGGAAAAACACGTTTGTTTCTTTGTATCTTCGGTTTGTTTTTGTCATTCTATGCTCTGCACGTTGAGATTTCGCGAGAGAGGGACCCTGAGTATCGGGCGATGTGCGACCTGGGAgattctgtgagctgctctaaaGTTTTCACCTCGAGATGGGGACGTGGTTTTGGACTTGTACAGTTCTTCTTTGCTAAAGACAGTGTACTGAATCAACCCAACAGTCTGTTGGGGATCATTTTCTACACATTGCAACTGGCTCTGGGTCAGTCTGTGTCCAGTAGGGCAGCGTTCCTCCTGGTCTTGGCCTCCTGGGTGTCCATGGCTGGATCGCTGTACCTAGCCGGAGTACTTGCCTTCATTCTGGGAGATTTCTGCGTGGTCTGCGTCTCAACCTATGTGGTTAACTTTTTGCTGCTCTTCACCAATCTGAAGAGGAGGACGGGACTGGAAGCAGTCAAGACAAAGACTGGCTGAGAGACTATCTTTgtgtgcatctcaatagtctaagtAGTTTTTTCCCCCTTGCCTTCCACCCTACTGCACTGATAATATatagcgcattcggaaagtattcagaccccttgactttttccacattttgttacgttagacttattctaaaaatACGATTTAAGAAATTTTTTCACTTTTAAGAAAAacggaaatataacatttacttaagtattcagaccttttactcagtactttgttgaagcacctttgacacagattacagccttgagtgttcttgggtatcacgctacaagcttggcaaccctgcatttg

Function

NR:

description
vitamin K epoxide reductase complex subunit 1-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611729.2 True 978 mRNA 0.45 3 75609347 75612396

Neighbor

gene id symbol gene type direction distance location
LOC110529486 LOC106577095 coding downstream 34401 75556145 ~ 75574946 (-)
LOC110529484 LOC106577044 coding downstream 106066 75500710 ~ 75503281 (-)
LOC110529482 LOC106577043 coding downstream 114683 75492016 ~ 75494664 (-)
LOC110522123 LOC106577094 coding downstream 261003 75345113 ~ 75348344 (-)
LOC110529412 LOC106577039 coding downstream 460557 75135010 ~ 75148790 (-)
ccser2a ccser2 coding upstream 712135 76324531 ~ 76399997 (-)
LOC110529591 fam149b1 coding upstream 832012 76444408 ~ 76452168 (-)
LOC118964475 LOC106577059 coding upstream 853567 76465963 ~ 76467210 (-)
LOC110529704 LOC106577064 coding upstream 1251083 76863479 ~ 76871869 (-)
LOC110529688 LOC106577065 coding upstream 1259696 76872092 ~ 76930446 (-)
G84798 NA non-coding downstream 4771 75604302 ~ 75604576 (-)
G84779 NA non-coding downstream 16204 75592762 ~ 75593143 (-)
G84720 LOC106577045 non-coding downstream 71776 75537016 ~ 75537571 (-)
G84721 NA non-coding downstream 73950 75535065 ~ 75535397 (-)
G84717 NA non-coding downstream 76868 75532268 ~ 75532479 (-)
G85001 NA non-coding upstream 122033 75734429 ~ 75734647 (-)
G85035 NA non-coding upstream 171824 75784220 ~ 75784504 (-)
G85036 NA non-coding upstream 172151 75784547 ~ 75784828 (-)
G85534 NA non-coding upstream 219759 75832155 ~ 75832835 (-)
G85772 LOC106577051 non-coding upstream 564278 76176674 ~ 76177923 (-)
G84713 NA other downstream 80444 75528343 ~ 75528903 (-)
fank1 fank1 other downstream 636026 74971772 ~ 74975108 (-)
G83429 NA other downstream 1036558 74572447 ~ 74572789 (-)
LOC110528794 LOC106576993 other downstream 3357429 72202814 ~ 72251918 (-)
G80957 NA other downstream 3398258 72207929 ~ 72211089 (-)
G85866 NA other upstream 721072 76333468 ~ 76334136 (-)
G86063 NA other upstream 908689 76516251 ~ 76523481 (-)
G86132 LOC106577062 other upstream 994286 76606682 ~ 76608354 (-)
G86448 NA other upstream 1254508 76866904 ~ 76867598 (-)

Expression


Co-expression Network