LOC110529610


Basic Information

Item Value
gene id LOC110529610
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76457821 ~ 76459823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611969.2
caatccaattgagatgatttgggaggagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatttttttttctccatttaactaggcaagtcagttaagatcaaattcttattcacaGTGACGGCCTAAACCTGGCCTAACCCGGAGgctgctgggccaattgtgcgctgccctatgggactactAATCGCGGCCGGATGTGATGCGGCCTGGATTccaaccaggtactgcagtgacgcctcttgcacttcggcgcagtgtcttagaccactgcgccactcgggagccctatgtgggaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcaagaaaattgtaaaaaaataaagaactcttgaatgagtaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGA
>XM_021611985.2
caatccaattgagatgatttgggaggagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatttttttttctccatttaactaggcaagtcagttaagatcaaattcttattcacaGTGACGGCCTAAACCTGGCCTAACCCGGAGgctgctgggccaattgtgcgctgccctatgggactactAATCGCGGCCGGATGTGATGCGGCCTGGATTccaaccaggtactgcagtgacgcctcttgcacttcggcgcagtgtcttagaccactgcgccactcgggagccctatgtgggaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcaaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGA
>XM_021611993.2
caatccaattgagatgatttgggaggagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatttttttttctccatttaactaggcaagtcagttaagatcaaattcttattcacaGTGACGGCCTAAACCTGGCCTAACCCGGAGgctgctgggccaattgtgcgctgccctatgggactactAATCGCGGCCGGATGTGATGCGGCCTGGATTccaaccaggtactgcagtgacgcctcttgcacttcggcgcagtgtcttagaccactgcgccactcgggagccctatgtgggaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcaaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGA
>XM_036985650.1
caatccaattgagatgatttgggaggagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatttttttttctccatttaactaggcaagtcagttaagatcaaattcttattcacaGTGACGGCCTAAACCTGGCCTAACCCGGAGgctgctgggccaattgtgcgctgccctatgggactactAATCGCGGCCGGATGTGATGCGGCCTGGATTccaaccaggtactgcagtgacgcctcttgcacttcggcgcagtgtcttagaccactgcgccactcgggagccctatgtgggaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcaagaaaattgtaaaaaaataaagaactcttgaatgagtaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGA
>XM_021611976.2
ttaacactttttttggttaatacgtgattccatatttgttatttcatagtttttaatgtcttcactattattccacaatgtagaaaattgtaaaaaaataaagaactcttgaatgagtaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGA
>XM_036985637.1
ttaacactttttttggttaatacgtgattccatatttgttatttcatagtttttaatgtcttcactattattccacaatgtagaaaattgtaaaaaaataaagaactcttgaatgagtaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGA
>TU94291
tgggaactccttcaagactgttggaaaagcattcctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcaaggtaaagggtggctactttgaagaatataaaatatatttcatttgtttaacactttttttggttaatacgtgattccatatttgttatttcatagtttttaatgtcttcactattattccacaatgtagaaaattgtaaaaaaataaagaactcttgaatgagtaggtcggAAGGTCTTAGGAAGTACATGGATGAGATGGACCATGAGCTTAAGGGCACCAGCATGGGACAGAGCTTCAACCAGCAGCAGGGCACCAATAAAGTAGGCCCAGCAGCCAATGGCTGCCCTCGTTCCCCCAGCGGGGAGGGTCTGCTGGGTGAGGATGAGGAGATCCAGCCCCTGGACATAGACCTTAACATGGTCACTAACCTCCTGGAGTCTCTGAGCTCCCGGGCTGGCCGGGCCGGCCTCTAACCTGCTGCAGAGTCTGGGCATCCACCTGCCACCCAATACTTGACCGTTCATGCTGAACACCTGCCCCTCAACTCTGACCATTCATTGAGAACTCTGACCGCTCATTATGCCCTAGCAAAGAAAATCACCCAACACCTAGTTCTTACTGTCTGCGCAGCCTAGATACACTGCCCTTTAAACCTTTTGCTCACAGagtacaccatggaccacaccAGAATCAATAATGTACATCAGGACAGTGGTTTGACAACTGGATAATGTTTGCCATTCTGAATGCAGGATCTAAAAGGTAACTGTAACCCTACAATGTTGTCATCCTAACGTAGAGGCACTTTCACCCCTTTTGGATATTTGAATCTGATTGTCCTAAATATAACATgtagtttaaaatgttttttttgttttacagcaCTTAAATCATTACTTAGTCAAATAATAAAGTCGTACAGCACATTGATATATCAGCTGACGTAAGAAAGGCTATATAAATCTATTTGATGTGATACTTTTTTTGGGACAAAATGTGCAGTCATTTTCTAAATATATGATGTTAAATGAGGTTTCAAGGCAGTGAAAATATTATTTTCTTCGCTTACCCTGTGCCGTATTATTACACAATCTCATTGTGATTCAATATTAACCAAAGCCCAGCCAATTTTAGTAATACATTTGAGATAAACATGTGGACTTGCTTTCTGTTAACTTTTTATTGTTTCATGTGGGGATTTGAGAAACCTTGAGGAAGACATAGTGTCTCTATGCAGAGTTTCCCAGACCTTATcttcgggaccccaaggggtgcacattttggtgtAGGCCCTATTTTGGTTCAGCTTTGTAGTttctagggcaaaaaacaaaacgtggaccaagtttgggaaacactgctgtatTGGTTTCTAGCACTTGGAGTagagatcactttctgagtctaAATGCAAGCTGAGATCTACTGCTCAGATTTTAACTATGCAATTGAAAACAGTTCTGTATCAATGAGGTTTGTGCAATAGGCTATAGGCCCAGTACATTATCACTGCCAATTGactatgctt

Function

NR:

description
protein ecdysoneless homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611969.2 False 1230 mRNA 0.46 3 76457821 76459326
XM_021611985.2 False 1193 mRNA 0.47 3 76457821 76459326
XM_021611993.2 False 1190 mRNA 0.47 3 76457821 76459326
XM_036985650.1 False 1227 mRNA 0.46 3 76457821 76459326
XM_021611976.2 False 925 mRNA 0.42 2 76458251 76459326
XM_036985637.1 False 928 mRNA 0.42 2 76458251 76459326
TU94291 True 1552 TUCP 0.41 2 76458124 76459823

Neighbor

gene id symbol gene type direction distance location
LOC110529603 NA coding upstream 46 76452265 ~ 76457775 (+)
LOC110529567 LOC106577057 coding upstream 17749 76434261 ~ 76440072 (+)
LOC110529556 LOC106577056 coding upstream 24383 76420427 ~ 76433438 (+)
LOC110522192 LOC106577055 coding upstream 40870 76404181 ~ 76416951 (+)
LOC110532683 LOC106577051 coding upstream 279843 75833931 ~ 76177978 (+)
LOC118966715 LOC106577078 coding downstream 15998 76475324 ~ 76477534 (+)
LOC110529637 LOC106577060 coding downstream 19873 76479199 ~ 76496251 (+)
LOC110529651 LOC106577061 coding downstream 45045 76504371 ~ 76525418 (+)
LOC110529657 LOC106577062 coding downstream 72549 76531875 ~ 76624063 (+)
LOC110529681 LOC106577063 coding downstream 237992 76697318 ~ 76804833 (+)
G85522 NA non-coding upstream 5667 76451671 ~ 76452154 (+)
G85521 NA non-coding upstream 6885 76450726 ~ 76450936 (+)
G85519 NA non-coding upstream 8260 76449050 ~ 76449561 (+)
G85458 NA non-coding upstream 113618 76343747 ~ 76344203 (+)
G85525 LOC106577059 non-coding downstream 6877 76466203 ~ 76466666 (+)
G85526 NA non-coding downstream 7751 76467077 ~ 76467360 (+)
G85531 NA non-coding downstream 22530 76481856 ~ 76483675 (+)
G85980 NA non-coding downstream 47148 76506474 ~ 76575201 (+)
G86199 NA non-coding downstream 249650 76708976 ~ 76709285 (+)
G83979 NA other upstream 1312309 75144864 ~ 75145512 (+)
G83829 NA other upstream 1343631 75112660 ~ 75114190 (+)
G83836 NA other upstream 1548015 74909225 ~ 74909806 (+)
G82111 LOC106577091 other upstream 2886084 73551616 ~ 73571737 (+)
ccdc85a ccdc85a other upstream 5381719 71036440 ~ 71076239 (+)
G86019 NA other downstream 172419 76631745 ~ 76635936 (+)
G86614 NA other downstream 664609 77123935 ~ 77124427 (+)
G87159 NA other downstream 1110689 77570015 ~ 77570470 (+)
G89667 NA other downstream 3089691 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 3292447 79720751 ~ 79765359 (+)

Expression

LOC110529610 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 4.
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LOC110529610 Expression in each Bioproject

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LOC110529610 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network