Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110529657 |
| gene name | LOC106577062 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 76531875 ~ 76624063 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ryanodine receptor 2-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021612105.2 | False | 15070 | mRNA | 0.54 | 102 | 76531875 | 76624063 |
| XM_036985673.1 | True | 14123 | mRNA | 0.54 | 93 | 76536831 | 76624063 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529651 | LOC106577061 | coding | upstream | 6457 | 76504371 ~ 76525418 (+) |
| LOC110529637 | LOC106577060 | coding | upstream | 35624 | 76479199 ~ 76496251 (+) |
| LOC118966715 | LOC106577078 | coding | upstream | 54341 | 76475324 ~ 76477534 (+) |
| LOC110529610 | NA | coding | upstream | 72549 | 76457821 ~ 76459823 (+) |
| LOC110529603 | NA | coding | upstream | 74100 | 76452265 ~ 76457775 (+) |
| LOC110529681 | LOC106577063 | coding | downstream | 73255 | 76697318 ~ 76804833 (+) |
| LOC118966716 | NA | coding | downstream | 182222 | 76806285 ~ 76809565 (+) |
| LOC110532693 | LOC106577081 | coding | downstream | 188217 | 76812280 ~ 76864222 (+) |
| LOC110529711 | LOC106607701 | coding | downstream | 311412 | 76935475 ~ 76938864 (+) |
| LOC110529720 | NA | coding | downstream | 319487 | 76943550 ~ 77015372 (+) |
| G85531 | NA | non-coding | upstream | 48200 | 76481856 ~ 76483675 (+) |
| G85526 | NA | non-coding | upstream | 64515 | 76467077 ~ 76467360 (+) |
| G85525 | LOC106577059 | non-coding | upstream | 65209 | 76466203 ~ 76466666 (+) |
| G85522 | NA | non-coding | upstream | 79721 | 76451671 ~ 76452154 (+) |
| G85521 | NA | non-coding | upstream | 80939 | 76450726 ~ 76450936 (+) |
| G86199 | NA | non-coding | downstream | 84913 | 76708976 ~ 76709285 (+) |
| G86208 | NA | non-coding | downstream | 95436 | 76719499 ~ 76720099 (+) |
| G86226 | NA | non-coding | downstream | 114205 | 76738268 ~ 76769395 (+) |
| G86331 | NA | non-coding | downstream | 283530 | 76907593 ~ 76908823 (+) |
| G86334 | NA | non-coding | downstream | 286682 | 76910745 ~ 76911430 (+) |
| G83979 | NA | other | upstream | 1386363 | 75144864 ~ 75145512 (+) |
| G83829 | NA | other | upstream | 1417685 | 75112660 ~ 75114190 (+) |
| G83836 | NA | other | upstream | 1622069 | 74909225 ~ 74909806 (+) |
| G82111 | LOC106577091 | other | upstream | 2960138 | 73551616 ~ 73571737 (+) |
| G86019 | NA | other | downstream | 7682 | 76631745 ~ 76635936 (+) |
| G86614 | NA | other | downstream | 499872 | 77123935 ~ 77124427 (+) |
| G87159 | NA | other | downstream | 945952 | 77570015 ~ 77570470 (+) |
| G89667 | NA | other | downstream | 2924954 | 79549017 ~ 79549651 (+) |
| acoxl | acoxl | other | downstream | 3127710 | 79720751 ~ 79765359 (+) |
