LOC110532693 (LOC106577081)


Basic Information

Item Value
gene id LOC110532693
gene name LOC106577081
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76812280 ~ 76864222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989873.1
TCCAGCTTGTACCCTCCTGCAGTCAGGATGCAGACCATTCAGACTGTAGAGACCCAGGTACCTTTCCTGAAGGAGAGCTTCTTCACCACAGCGTTTAAAGACAGGAGGAAGAGTAGTGTGACTAACCTGCTCCGcagacagcaacaacaacaacatcatactCACCATCCGCTTCCGCCTTCTCTGGACGGGGAGGAGCCTCGCATTGAGCATGCTCGACTGGGTCGCTCATCCAGCAGCCCGTTATGCAACAAAGCAGAGCGAGCAGATAggagcagggagggggagggagacagtgagtctGTCAGCCTCCTCTCAGCAGCAGCATCCTCACAGCTGCTCCTGACACCGACGAGCAGGCAGGGATTAGTGCTGAGCTCCCGGAGAACCAGTTCAGCAACCCATGAGAAACAGCCCCAGCAGCATGGCCTGATCGCCAAGGGGGTCCGCCTGTTTAGGAACATGGGGAACCAGGAGGCCAAGCAGAGGAAGGTGGTTGGGGGAGACACCCCCTGTGATGGGGGAGCCGAGGACAGAGAACCGGAGTGCTCTAATAAAGGCAAGAAATCCAAAGGGGGAGATGCCGGCAAGAAGAAATCCAAATCGGAATCCAAAAGCTCTGTGTTTTCCAGTATGCGGCTCAGGAAGAGTCTGTCGAAGGCGAAGGGGTTGTCCAAGGAGGATATCCTGGACAGCAAGGGATCCCAGCTGGAGGAGACTGGTGGGGTCAACAGCAGCCTCTCGGCAGATGAGCTGGGAATGATGTCGGATGGTGAGCCAGAACAAGGCCACTTGACAACATCGGGGCCGGAGGACGAGGGCCAGAGGATTAGTTCAGGATCAGACGGGGACCTCTACAGCTTCCACTCTGCTGCGGCTGATCATGAAGATCTGCTGTCGGACATCCAGCAGGCTATTAGGGAGCAGCATGGGGCCTCTGACGGGGTCCTGGATAGGGTCACTGTCCCTTTGGCTGAGGGGGTCACCTCCCCCATCTCCGATGATGATGTTGAACCCCTAGCCCCTGACCCCACTGACCCACAAGAGGTAGTCTGCACTCAGGGGCCAGACCTGGACAAGGGACAGGTGGATGAGACACCTGTTGTTCCTGATACTGTAGGACCAGACCAAAGTGCTGAGCTTGGACAGTCagaggcagagggaggtgttGCATCTGGGGAGGAGTCAGATTTAGGTTCACCAAGTGACAGTGGCCCCTCCTCTGCTGCCTTCGACACCGAGAGGAGCAGTGGAAGCCCCCTGCCCAAAACCACCAGTACCTACAGCTTCCCagacaccaccgccaccaccacatCCTATGAGAGCGCCGAGGAGCCCCAGGACGACCTGGAGAGTCCGGTGGTGACCTCCCAGCTGACTCAGAGCCAGAGCTTTGATGAGGGGGGTAGCACCATCGAGGGGGTCAGGTGCATCAGGTTGGGAACGACCTCAGGGTCACCCAGAAGTGTCAGTAACATGGACCTGActgtggagagggaggagggggacagggggagagacttCCGGTCTATGAGCAGGAGGAAGAGTAGctattctgtctctctgctgaCGGCTGACAGTTCTAAAAGAGCCCTTTCCAGAAGGACGTCCTCCACTACCTCCACTGTCAAGCCCTATCCTCCCATCCACCCTTCCTACGTGAAGACCACCACCAGGCAGTTGACATCCCCCATAGGCTCCCCCAGCCAAAGCCCCCTTATCCCCCGTAGGATGGGGCCAGGCTCTGGGGCAGGGTATGGGGGCCACAAGGCCCAGCTGTGGAGGACCACCAGGCAAAGGTCCTGCAGTATCGCCGGGCCTCTCAGTCATTCTGCAGACTGGACCAAGGATCTGGAAGGCCTCAGAGCTAGGCATGAGGATGCCGCTGACCTCCAGGAGCatggggggtcagagagaggcaTCCCAGGGGCTAGTCTGACCCTAGGCACCAGACTACGCCTCTCAGGTGTCCAGAACACCACCACAGGGCCAAATCAAGATGTCTTCTCTGGACACACCCTGTTGGAGCGTCTATGTCTGCAGCAGCAAGGGAAGGGAGTGACggaggaggaggcggagaggTTGTGTTGTCGTATGTTGGGCCTGGGGCTGCTGCAGCCCCTCAGTGACTGTTTCAGAGAGCAGCATGAAGACATTGTCACTCCAGCCACAGTCACCTTTAATGAGGACCAGCTGTATACGTGGGCCACCTTCGGCCTGCCCTCCCACCTCTGGGAACCCCATGAAGGCCGTACCCCAGGCCGCATCCAGGACCTGTGGCCCCCTCCACAACCAGCTCAGATTTCGTCAAAGTCCAGGAATCTGTCACAAGAAGACAATGGCAGTGATATTCCAGGGCTGGAGAAGACCATTAATGACTTGAGGATAAAGATGGCAGCACTGGAAATCCAGCATGCATCTCTGGAGATGGAGATCGACTCGAAGAAGAGTGGAGATGGGGACAATACTGTGGCCTTGGGGGGTATCAGCCTCGCAGGAAAGAAGAGGATCGAGGTTTCCGTACAGACATCCCCTTTGGAGGAGGCCTTTAGATTTGAAGTGCCTTTCAGGGGAGGGTCAAtcccctcctcagcctctctcccagcaatctcctcctcctccctccacaaACCTGAGTTTGTCTGTACCtgccaacagcagcagcagagtggTACCCAGCCCCCACCTTCTCCCACCCCAGGtataccccctcctcctcctccccttcctcctctacctcagcTCTCTGGAGGgcccccaccacccccaccccctcGTATGGGCGGATCCTGtcccccacctccaccccctcccctGCCAGGCTTTggacctccacctccacccccgcCACCAGGTATTGGCCCCCCTCCTCCGCCCCCACCCCCCGGCGGTGGACCTCCACCTCCCCCAGGATTtggccctcctccccctcccggTGGATTCATGGCCCCCATGGCCCAGGAGGCTGGCCCTCAGAAGGCACCCATTGAGCCCCCCAAGCCCATGAAGCCTCTCTACTGGACCAGGATCCAGCTGCATGCTAAAAAGGATGCGAGTGGTTCTCTGGTTTGGGAGAAGATCGAGGAACCGTCAGTGGATTTTGATGAGTTTGTCAACTTATTTTCCAAAAGTGCTGTGAAGGAGAAAAAAAAGCCGATATCAGACACCATCACCAAGTCCAAGGCCAAACAGgtggtgAAGCTTTTGAACACCAAGCGATCTCAGAATGTGGGGATCCTCATGTCCAGCATCCACTTGGACATGAAGGACATTCAGAATGCCATTCTGAACATGGACAACACTGTGGTGGACCTTGAGACCTTGCAATCCCTGTATGACAATAGAGCCCAGCAAGATGAGATGGAGAAGATTGAGAAGCACATCAAGTCATCCAAAGATAAAGACGACGCAAAGCCATTGGACAAGCCTGAACAGTTTCTCTTCCAGCTGTCCCAAATCCCCAATTTCTCAGGAAGGGTGTTTTGTATCCTCTTTCAATCAACCTTTGATGAATGTATCTCCTCCATCCTCCGGAAAGTTGAAATCCTTCAGAGAGTGTGTACGACTCTGCAGAGAGGTCAGTGTGTGATGCAGGTGCTAGGTCTTGTCTTAGCTTTTGGGAACTTCATGAACGGAGGGAACCGATCGCGCGGGCAGGCTGACGGCTTCACTCTGGACATCCTGCCCAAACTCAAGGACGTCAAGAGCAGTGATAACTCTCAGAGTCTTTTGTCATTCATCGTTGCTTACTATCTAAGGCACTTTGATGAGGACGCAGGTAGAGAGACCTGTGTCTACCCTCTCCCTGAACCCCAGGATCTCTTCCAGGCCTCTCAGATGAAGTTTGAGGACTTTCAGAGAGATCTACGCAAGCTAAGGAAAGACCTCAAAGCATGCTCGGCCGAGACAGAGAAGGTCTGTCAGGTCTCTTCTGAAGAGCACCTGCAACCCTTTAAAGAGAAGATGGAGGGGTTTCTGAGCCAAGCAAAAACTGATCTGGAGGCACAAGAAACACAACTAGAGAACACTCACAAGATTTTTTTGGAGCTGAGCATGTTCTTTTCAGTCAAGGCCAAGGCGGGCGAGAAGGAAGTCTCTCCCAACACGCTGTTTTCTGTGTGGCATGAGTTCTCCACTGATTTCAAAGATCTTTGGAAGAAGGAAAACAAACTGAGGTTACAGGAACGACTGAAAACGGCAGAGGAGGTTTTCAAACAAGCCAGAGAGAAGGTCTCGTACAGCGTCAAACCCAAACAGTCCTCTGGAATAAAAGCCAAACTCGGTCAGAAGATCTGAGCCAATGGACTGGAGAAGTCTTACCCAGGAAAAGTTTGCACAAGTGAGATCAACACAATCTGATATGTCTTTTTAGCTATTGTATTTAAAAATATGTTatgttcttttctttttttaatagTTTATTTCTGTCATCCAACTGGTTATACATGTAACTATGCCCAACATACTTGTTGGAAAGTTTGATATAAACCCTGTACCATGCTTTGGCGCTATCTGTCAATGAGAGATTTCTCCCAAGTCCAAAGTAAGTATTGTAGAATTAATTAAACAGTTAATTATTTTTGGACAGATGCCATTTTAATGAGAAATGCATCGTTTTACAGTGCGACACACATGTTCTGGTATCCAGCCTATCCCCTGTAGCATTTGATAGAAGACACCAGTTAAGACAATCATGTTTCAATAAGCCATTTCTATCCATCCCTGCACTGCCTTCCAGTATAAAAAGGAGAACAAGAGTGAGCTTGTATATATATTTGCTTACCAGACAGCAAGTCAAGTGCCTTTATAGCACACTGAGCTAGTTAATGACAAATGAGCCAATTCAATTAATCTACATTACAACCTGTATGGAAACCAGACCTGCTTAGTGAAAACTTGCATTGTGACAATAATCAGTTTATCATACACTGTAGTTTCATAGAAGGATGATACGTGATGTACAGTTGTAGTTTATGCAATAAATCATGAACTTAACCATGACTTGAGTTTAGCTGCTAAGGTATTTAGAACCAAGGTATTTAGTAGGTCATGAGGATTTCACATCATCctctattgttttttttattatggAACCATAGCTACATATTGAAATAAtattacaattttaaaaaataaccTTATCCACATTACATGTAAAATGATATGCAATCTGTATGTGACATATCCTGTATGATTTGTATGTTTGAATTGTTTTcctgttctatgttttgtatgaGCCTTGTAGAGCTGTTGGTGACTGTGTCCCCATTTGCAATAACGCCTTTGTTCCTGATAAAATACTATTTATTGAAGATGAA

Function

NR:

description
PREDICTED: formin-2-like

GO: NA

KEGG:

id description
K02184 FMN2; formin 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989873.1 True 5318 mRNA 0.51 18 76812280 76864222

Neighbor

gene id symbol gene type direction distance location
LOC118966716 NA coding upstream 2715 76806285 ~ 76809565 (+)
LOC110529681 LOC106577063 coding upstream 7447 76697318 ~ 76804833 (+)
LOC110529657 LOC106577062 coding upstream 188217 76531875 ~ 76624063 (+)
LOC110529651 LOC106577061 coding upstream 286862 76504371 ~ 76525418 (+)
LOC110529637 LOC106577060 coding upstream 316029 76479199 ~ 76496251 (+)
LOC110529711 LOC106607701 coding downstream 71253 76935475 ~ 76938864 (+)
LOC110529720 NA coding downstream 79328 76943550 ~ 77015372 (+)
LOC110529780 LOC106577069 coding downstream 163238 77027460 ~ 77048352 (+)
LOC118965545 NA coding downstream 422767 77286989 ~ 77287694 (+)
LOC100136692 cdc2 coding downstream 475432 77339654 ~ 77345543 (+)
G86226 NA non-coding upstream 42885 76738268 ~ 76769395 (+)
G86208 NA non-coding upstream 92181 76719499 ~ 76720099 (+)
G86199 NA non-coding upstream 102995 76708976 ~ 76709285 (+)
G85980 NA non-coding upstream 237079 76506474 ~ 76575201 (+)
G85531 NA non-coding upstream 328605 76481856 ~ 76483675 (+)
G86331 NA non-coding downstream 43371 76907593 ~ 76908823 (+)
G86334 NA non-coding downstream 46523 76910745 ~ 76911430 (+)
G86347 NA non-coding downstream 62780 76927002 ~ 76928410 (+)
G86348 NA non-coding downstream 64934 76929156 ~ 76930431 (+)
G86491 NA non-coding downstream 75045 76939267 ~ 76939744 (+)
G86019 NA other upstream 176344 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 352457 76457821 ~ 76459823 (+)
G83979 NA other upstream 1666768 75144864 ~ 75145512 (+)
G83829 NA other upstream 1698090 75112660 ~ 75114190 (+)
G83836 NA other upstream 1902474 74909225 ~ 74909806 (+)
G86614 NA other downstream 259713 77123935 ~ 77124427 (+)
G87159 NA other downstream 705793 77570015 ~ 77570470 (+)
G89667 NA other downstream 2684795 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2887551 79720751 ~ 79765359 (+)
G91064 NA other downstream 3900892 80765114 ~ 80766155 (+)

Expression


Co-expression Network