LOC110529704 (LOC106577064)


Basic Information

Item Value
gene id LOC110529704
gene name LOC106577064
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76863479 ~ 76871869 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612160.2
GTACGAGAGGGAGTGATAGAGGGAAGAGGGAATGAGCAAGACTGACAGGGGATTCCAAGAGTGGAGAGTCAGCAGTGAGTATGTTTGTGGAAACAGGAGGGAGGATAAGTatgcagagaaacagagagggtaTGGGAGAGAGGTGAGGCTTGGTTTGATTCATGTTGTGGTCAGAGCCAATAGAAAGCCCCCATCTATGTCTAAGGGGAAGCAGAAGTGCGACTCCAAACCCAGctggaaacacacagagacaccgaACTAGAATACTGAGACACAGAAACCCAATGGCATAGAAAGACAGATTAcaaagagaggagaaaaagatATATACATATTTTGAGATAAATATGGATTATTAATAAACTCAAAGATACAGACTCAGTGGAGAGAAACAGGACCACAGACCTTGGGACACTCAGCTGAAAGTCCACCTCGGGTACCCCTGCTGTTCCAATGGAAACCAACACCAGGATTCCCTCTACAGGACCAGTAAGGGTGGACAGCTACCCCTAACTGAGACAGGATCACCCCACTGTCCTGGGACACTGTGGCAAGAGAATGTTTTGGAGAATCACTCTCCCGGTCCTACTGGCTGGGGTGCTCTGCGTTGCCACAGACACCAGGAAGCCCCGCCCCCAGGGCTCCATCCCCTCACTTTTCAAGACCAAAGGCAACATGTCGGAGCGTCAGCGCCTGTTGCCGCGAAAACCCGAAGTCCTTTCGTCAAGTCGGGAGGCCCTGGTGGTCACGGAGCGCCGGTACCTCCGACGTGACTGGTGCAAGACACAACCCCTCCGCCAGACAGTGAGTGAGGAGGGCTGTCGGAGTCGTACGGTGGTCAACCGCTTCTGCTATGGCCAGTGTAACTCCTTCTACATCCCCCGCCACATGAGCCCTAGCTCAAATCGAGGCTTGGGGTCCGGCCGGAAGAACCACAACAAGGCCCAAGAGCCCTTCCAGTCCTGTTCCTTCTGCAGGCCGCACCGCATCACCCAGCTCACTGTGCAGCTGGACTGTCCAGGGCTGCAACCAGCCTTCCGCCATCGCAAGGTGCAGCGTGTCAAACAGTGTCGCTGCATGTCGGTGGATGTGAGTGGTAACGGAAAACTGTGAGGGATTCTTTGGAACCAGACCATGACAGTCACCATGGACACTAATGTGACTGTGAAAGTGAACGTTAACATGAACATGAATACCGTAGACATGACAGGGGACAAGCTAGTAGTACCTCTCCCCTATATTGGACTATGCTGCATTATCACTTTGTACACAGGTCTACTGGTCACACAAAATGAACCCTACAGGTACTGGTAGTACAGAGTGGCCCATCTATTAGCCCTTTGACTATATGGACAGCTATGGTAAAAACTACAAATTGCAGACATAAATGGATGCATTGCACAACACCAACTGAAGCACAGACATGTTTCAGTTCATATTAAACAACTGGGTCCTTGGACATTTGGAACATATAAAACCATAAGCACAGCACCAAGTTCTAGACTGAAAGTGGAGCTGCCTATGGCATGCTGTGGACTGGGCTTACCTGGGGGAACTGTCCAGGCAATAGGGCTTCAGACTGAGAAAAAAGAACCTAGTCTGTCTAAGTATCTGCCTGTGGATTTAAGAGCCACCTGTGAAATAATTGACACAAATATCAAGCTAGCCAGTAAAGAAATGATATTACTATTTTATGTATAACTGTTgtactataaatatatatgtatatgtcaAAGGATAAGTagctataaatatatataaaatctaTTTCATGTGAAACATCTGTGTGGTCTGAATGCAAACAATGTTGTGGCAATAAAGGATATAGTTGACTAATGATGTTTGAGAAGAATAGGCTCAACAACTATTCAGATAAAGACTTTCAGGACGATTCATCTTCAATAAATAGTATTTTATCAGGAACAAAGGCGTTATTGCAAATGGGGACACAGTCACCAACAGCTCTACAAGGCtcatacaaaacatagaacaggAAAACAATTCAAACATACAAATCATACAGGATATGTCACATACAGATTGCATATCATTTTACATGTAATGTGGATAAggttattttttaaaattgtaataTTATTTCAATATGTAGCTATGGTTccataataaaaaaaacaatagagGATGATGTGAAATCCTCATGACCTACTAAATACCTTGGTTCTAAATACCTTAGCAGCTAAACTCAAGTCATGGTTAAGTTCATGATTTATTGCATAAACTACAACTGTACATCACGTATCATCCTTCTATGAAACTACAGTGTATGATAAACTGATTATTGTCACAATGCAAGTTTTCACTAAGCAGGTCTGGTTTCCATACAGGTTGTAATGTAGATTAATTGAATTGGCTCATTTGTCATTAACTAGCTCAGTGTGCTATAAAGGCACTTGACTTGCTGTCTGGTAAGCAAATATATATACAAGCTCACTCTTGTTCTCCTTTTTATACTGGAAGGCAGTGCAGGGATGGATAGAAATGGCTTATTGAAACATGATTGTCTTAACTGGTGTCTTCTATCAAATGCTACAGGGGATAGGCTGGATACCAGAACATGTGTGTCGCACTGTAAAACGATGCATTTCTCATTAAAATGGCATCTGTCCAAAAATAA

Function

NR:

description
gremlin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612160.2 True 2635 mRNA 0.44 2 76863479 76871869

Neighbor

gene id symbol gene type direction distance location
LOC118964475 LOC106577059 coding downstream 396269 76465963 ~ 76467210 (-)
LOC110529591 fam149b1 coding downstream 411311 76444408 ~ 76452168 (-)
ccser2a ccser2 coding downstream 463482 76324531 ~ 76399997 (-)
vkorc1 LOC106577046 coding downstream 1251083 75609347 ~ 75612396 (-)
LOC110529486 LOC106577095 coding downstream 1288533 75556145 ~ 75574946 (-)
LOC110529688 LOC106577065 coding upstream 223 76872092 ~ 76930446 (-)
LOC110529759 LOC106577068 coding upstream 175933 77045476 ~ 77084980 (-)
LOC110529788 LOC106577150 coding upstream 213005 77084874 ~ 77103340 (-)
LOC110529797 LOC106577148 coding upstream 232497 77104366 ~ 77118912 (-)
LOC110529822 LOC106577147 coding upstream 257041 77128910 ~ 77142504 (-)
G86133 NA non-coding downstream 253835 76608684 ~ 76609644 (-)
G86094 LOC106577062 non-coding downstream 287836 76562203 ~ 76575643 (-)
G86063 NA non-coding downstream 339998 76516251 ~ 76523481 (-)
G85960 NA non-coding downstream 388042 76474849 ~ 76475437 (-)
G85951 NA non-coding downstream 400587 76462582 ~ 76462892 (-)
G86492 NA non-coding upstream 64772 76936641 ~ 76938757 (-)
G86783 NA non-coding upstream 150483 77022352 ~ 77022625 (-)
G86798 NA non-coding upstream 194529 77066398 ~ 77066950 (-)
G86802 NA non-coding upstream 200377 77072246 ~ 77072449 (-)
G86132 LOC106577062 other downstream 255125 76606682 ~ 76608354 (-)
G85866 NA other downstream 529343 76333468 ~ 76334136 (-)
G84713 NA other downstream 1334576 75528343 ~ 75528903 (-)
G87090 NA other upstream 606734 77478603 ~ 77479939 (-)
G89418 NA other upstream 2177942 79049811 ~ 79050491 (-)
G90081 NA other upstream 2662889 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 3011668 79862081 ~ 79917875 (-)
G90190 NA other upstream 3014806 79886675 ~ 79888180 (-)

Expression


Co-expression Network