LOC118965545


Basic Information

Item Value
gene id LOC118965545
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77286989 ~ 77287694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052933.1
tcgcatgaacatcggttgccaattggatggaaacctagctactgaatAAATGGGTTTAGCACAAGATAAAGAAGATGAAACAATCTACTGCTGCAACCCAAGGCCCAAGGCCAACGGATACTGAAGTTCCTGAAAAGGCAATCAGTTCCTACAGTGAGGGCCTGGGAACCAGCCTCTGATATGTCAGATGGAGACCAGGACAACACAAAGTAAAAATTTACACataaaaaataaacttttttACAAGGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052933.1 True 252 mRNA 0.41 2 77286989 77287694

Neighbor

gene id symbol gene type direction distance location
LOC110529780 LOC106577069 coding upstream 238637 77027460 ~ 77048352 (+)
LOC110529720 NA coding upstream 271617 76943550 ~ 77015372 (+)
LOC110529711 LOC106607701 coding upstream 348125 76935475 ~ 76938864 (+)
LOC110532693 LOC106577081 coding upstream 422767 76812280 ~ 76864222 (+)
LOC118966716 NA coding upstream 477424 76806285 ~ 76809565 (+)
LOC100136692 cdc2 coding downstream 51960 77339654 ~ 77345543 (+)
LOC110529906 LOC106577140 coding downstream 94164 77381858 ~ 77451342 (+)
LOC110529921 LOC106577139 coding downstream 173186 77460880 ~ 77468921 (+)
LOC110529936 aedo coding downstream 194790 77482484 ~ 77484050 (+)
LOC110529943 LOC106577137 coding downstream 206351 77494045 ~ 77502290 (+)
G86559 NA non-coding upstream 133263 77150988 ~ 77153726 (+)
G86619 NA non-coding upstream 143024 77143733 ~ 77143965 (+)
G86593 NA non-coding upstream 187755 77098858 ~ 77099234 (+)
G86588 NA non-coding upstream 196751 77090020 ~ 77090238 (+)
G86579 NA non-coding upstream 215651 77071124 ~ 77071338 (+)
G86937 LOC106577143 non-coding downstream 66790 77354484 ~ 77354871 (+)
G86938 NA non-coding downstream 68773 77356467 ~ 77356784 (+)
G86939 NA non-coding downstream 69556 77357250 ~ 77357637 (+)
G86949 NA non-coding downstream 83787 77371481 ~ 77371685 (+)
G86950 NA non-coding downstream 88877 77376571 ~ 77436269 (+)
G86614 NA other upstream 162562 77123935 ~ 77124427 (+)
G86019 NA other upstream 651053 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 827166 76457821 ~ 76459823 (+)
G83979 NA other upstream 2141477 75144864 ~ 75145512 (+)
G83829 NA other upstream 2172799 75112660 ~ 75114190 (+)
G87159 NA other downstream 282321 77570015 ~ 77570470 (+)
G89667 NA other downstream 2261323 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2464079 79720751 ~ 79765359 (+)
G91064 NA other downstream 3477420 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 4250637 81538331 ~ 81541400 (+)

Expression


Co-expression Network