tmem26a (LOC106577143)


Basic Information

Item Value
gene id tmem26a
gene name LOC106577143
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77352007 ~ 77356781 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612553.2
GTGGCTGTGTGTGGGAGTTTCAGGAATAACGGGACACTAGCTGTCGAATCTTTACTCTTAAGTATTATGGCGTTTGTGGTCAAATTTTCGTGTGCGGTAGTTACTAGGTTGCTTTTCATTCTTATCTCACTCATCGGAGTTTGGAGAGTGACATTGGTTAAAGATGACAATATCTACTGGTTTATGACATTCCTCTTTCTACCTCTCGTTGTCGAAATGATAATAACTTTGAAAAGAAGAAAGGGAAAAGATTATAAATGGTTCTCGCCAGCCATTATGTTGTTCCTTGTCAGTATCATTCCATCCATCTGGATTCTggaactacatcatcagcatcaCAACTCTAGTGACCTCCAGTGCAAGAAACTGGACTCTTGGGAAAATGTGAGAAGCATGATTTCTCTGAACGAAACGGTGGGGAATTTAACGGTTCAAACCTATCTAAAGGGTCTTGACCAACTCTTGTCCACGGTTTGTCCCAACGACTGGATCCTGGCCCTCCATCAGGTCCTTCTAATCCTACTCATCATAGGGAAGTGGCTCCTCCCACTGGGGGGCGGGGTCACACGGGAGGAGCTCTCCCAGCTCCTGCTCATCTTCGTTGGCACAGCAGCTGACATCTTGGAGTTCACCAGTGAAACACTGTCTGATGTCAAGGAAAACAGCCCTCAGCTGGTGTACATCATCTTGGCAGTGTGGACCTGGAGCATGTTACAGTTCCCTCTCCATCTGGCCGtgGTGAACTCAAAGCCAGAAAGCGAGGGTGAAGGCCAAGGCGATTCCCTCCTGACCAAGCACAGCACAGACATATGGAGCATCATTGAGAGCCTATTCATCCAGGATGGCCCTTTCCTTGTGGTCCGGCTCACCGTCATGACCTACTTTGATGTCTTCCACCAGATGTTGGTGTTCTTTACCATTAAAAACTTCCTGGTGGTCATCCTGAACTTCTACCGGCTGGCCGTCATATGCCAGAACTACAGACCTGTAGTCCGGTCCAGAAGCAGCAGTAACATCCCTGATTGTAGtagggtagaggtggagaggaagtATGGGGAGGGGAGgttggagagagacagggttccTGCCTCTGCTTTGGAGGAAGTTAATACAGAAAGTACCATTACGTAGTGCACTGTTTATACAATGCACAAGTTCAATATTGGACAGGATTTGTGAGTTCAAAAGCTGGAATGAATTATCTGACTTGACATTTCCATGCGTAAAGAGAAGGAGGGACAGAAACCGTTTAAAAGTCACAAGCATATATTCAATTTCAGCTCAGCTGATTTTCTACAGTATTTTAACTTTTTTGTAATGTTTTTACCCCTTTGACAAAAATGACATGGCTTAGAAGTTTACCCCCAAAGGTATGTGaaatagaagaagaaaaaaattgtTAGCAAACAAAGAGTATGACTGTAAAGGTAGGCAGCCAAATGTAACTGTCCACAGCTGACAAAATCTACCCAATTTTGTTTTCCAATGGGTTGCTTTTGACGATGGGAAAAGGTGTGATTATGCAgtggattcggaaagtattcagaccccttccctttttccacattttgttatgttacagacttattctaaaattgattcaataaaatattcctcatcaatctacacacaaaaccccataaggacaaa

Function

NR:

description
transmembrane protein 26-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612553.2 True 1650 mRNA 0.44 6 77352007 77356781

Neighbor

gene id symbol gene type direction distance location
LOC110529831 LOC106577144 coding downstream 38207 77148371 ~ 77313800 (-)
LOC110529822 LOC106577147 coding downstream 209503 77128910 ~ 77142504 (-)
LOC110529797 LOC106577148 coding downstream 233095 77104366 ~ 77118912 (-)
LOC110529788 LOC106577150 coding downstream 248667 77084874 ~ 77103340 (-)
LOC110529759 LOC106577068 coding downstream 267027 77045476 ~ 77084980 (-)
rtkn2a rtkn2 coding upstream 96929 77453710 ~ 77460660 (-)
LOC110529928 LOC106577138 coding upstream 127838 77484619 ~ 77487187 (-)
LOC110529949 LOC106577136 coding upstream 169650 77526431 ~ 77535457 (-)
LOC110529957 LOC106577135 coding upstream 178738 77535519 ~ 77542730 (-)
tbc1d12a LOC106577134 coding upstream 250138 77606919 ~ 77623628 (-)
G87016 NA non-coding downstream 243 77350516 ~ 77351764 (-)
G87015 NA non-coding downstream 3006 77348724 ~ 77349001 (-)
G86927 NA non-coding downstream 19981 77331699 ~ 77332026 (-)
G86859 NA non-coding downstream 117874 77192928 ~ 77234133 (-)
G86848 NA non-coding downstream 206570 77145235 ~ 77145437 (-)
G87074 NA non-coding upstream 82055 77438836 ~ 77446625 (-)
G87077 LOC106577140 non-coding upstream 90286 77447067 ~ 77451304 (-)
G87081 NA non-coding upstream 104264 77461045 ~ 77461299 (-)
G87085 NA non-coding upstream 114708 77471489 ~ 77473367 (-)
G87093 aedo non-coding upstream 125730 77482511 ~ 77483926 (-)
G86448 NA other downstream 484409 76866904 ~ 76867598 (-)
G86132 LOC106577062 other downstream 743653 76606682 ~ 76608354 (-)
G86063 NA other downstream 828526 76516251 ~ 76523481 (-)
ccser2a ccser2 other downstream 952051 76324531 ~ 76399997 (-)
G85866 NA other downstream 1017871 76333468 ~ 76334136 (-)
G87090 NA other upstream 121822 77478603 ~ 77479939 (-)
G89418 NA other upstream 1693030 79049811 ~ 79050491 (-)
G90081 NA other upstream 2177977 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 2526756 79862081 ~ 79917875 (-)
G90190 NA other upstream 2529894 79886675 ~ 79888180 (-)

Expression


Co-expression Network