LOC110529936 (aedo)


Basic Information

Item Value
gene id LOC110529936
gene name aedo
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77482484 ~ 77484050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612615.2
CCGCGTTAGGTACGAAGCGTTTTCTTTGCGGACGTGTGTGAAAGATATCCATGAATGGTGTGATGGGAGATACATTTGCGGTTGTGCCAGGCAGTGTACCCTTCACTTAAAATTGTATTAGACCTTCtgctttatttatattttatttgaatgtgAAGTTGGAATATATATTTCACTGGGTTTAATCAATCATTAtcaaggagagagaggcaggcagaatCATCGGCAGCTGTGCTTGGAGCCCTAGCCTGCTGCTAAAGCTAGCAAGCGCGAGACTTCACGGGCTAGTTAGCGATCATGCTTCGAGACAACATGACCTCCATCGTACAGAAAATTGCTAGACAGGCGCTTGTAACTTTTAGAAACCCATCTTCATTTGGTGATAAAGCGTTTTTGGGTAATCAATGTAAACTCCAAAGCCTCATGACCGAAATCAGAGCTGCGGATCTGAAGATCGCTCCAAGGAAAGTTGACAGCGCTTCTACGCCTTTGCCACACAACCCCCCGGTCACATACATGCACATATGCGAGACAGACGAATTCAGCATGGGGGTGTTTCTGCTAAAAAGCGGTGCTTCCATCCCCTTGCACGACCACCCGGGAATGTACGGAATGTTGAAAGTTATGTATGGCAAGGTCAGGATCACCTGTTTTGACAGGTTGGACAAATCAACTAGCGTGGCCAGTGACACGCAATTCAGCCCTCCACTGCTACCTTTTCAGAGAGGTGCGCTGAGGAGGTCGATACTCGGGTCGGTCGGGGAGTTTACAGAAGAAAGCGGGCCGTGTATCTTGACCCCTGACCGAAACAACCTTCACCAAATTGATGCAGTCGATGGGCCCACCGCTTTCCTCGATATTTTGGCACCCCCATATGATCCAGACGACGGGAGAGACTGTCATTATTACAAAGTTCTGCAGTCTGCCCCGGATTCTGAGGACAAAAAGGCTGACGATCAAAAAGAAATTTGGCTGATGGAAGTATCCCAACCTTCTGAATTCTGGTGTGGTGGTGAACCATACCCCGGCCCTGAAGTGAAGATCTGAAGCGCACTAGCTATGAACGCTGAATTGATTTGTGAACAATTGATTCTCAGGACCATGTCAAAACAATATGTAAATGTATGACGACCATGATTCCTACAATGGAATGGGATGTGTCACAGTGCTGTGTAATGGGAAAACATGTCTTGTGAACTAAAAGCACTTATCCTAAGTTGGACTATGCATTCTGCCTGTAATGAAAGTACTTAAGCAGTTGATAAATTGTGATCTTTGCACATCAGCTCTAATGTATTTGAATTTTTGATAAGCATTTCATGTCTTGAAATGAACTGAAACCATTCACATTACTCAAAATAAAAACAAAGGTGTATTAAAACTAAATGGCTAATTGGTGGTGTTCAAGCACTTTAAAATGTCAAAATCCATGATTTGCTCAGCATGTTTTGATTGGGTCAAACTACATTATTTGAGTTAATCCCATGGGACATGGATTACTGAATGACCATTTTATAAATTGCTTCATTAATTGAGCTTCCCTAATTAAACTTAAATCCCATAATAA

Function

NR:

description
2-aminoethanethiol dioxygenase-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0047800 cysteamine dioxygenase activity molecular_function

KEGG:

id description
K10712 ADO; cysteamine dioxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612615.2 True 1567 mRNA 0.43 1 77482484 77484050

Neighbor

gene id symbol gene type direction distance location
LOC110529921 LOC106577139 coding upstream 13563 77460880 ~ 77468921 (+)
LOC110529906 LOC106577140 coding upstream 31142 77381858 ~ 77451342 (+)
LOC100136692 cdc2 coding upstream 136941 77339654 ~ 77345543 (+)
LOC118965545 NA coding upstream 194790 77286989 ~ 77287694 (+)
LOC110529780 LOC106577069 coding upstream 434132 77027460 ~ 77048352 (+)
LOC110529943 LOC106577137 coding downstream 9995 77494045 ~ 77502290 (+)
LOC110532710 NA coding downstream 25508 77509558 ~ 77512353 (+)
LOC110522259 LOC106577152 coding downstream 152209 77636259 ~ 77637356 (+)
LOC110529971 LOC106577133 coding downstream 161889 77645939 ~ 77647927 (+)
LOC110529985 LOC106577132 coding downstream 178232 77662282 ~ 77664950 (+)
G86966 NA non-coding upstream 11737 77469998 ~ 77470747 (+)
G86978 NA non-coding upstream 20385 77461871 ~ 77462099 (+)
G86971 rtkn2 non-coding upstream 27184 77453917 ~ 77455300 (+)
G86950 NA non-coding upstream 46215 77376571 ~ 77436269 (+)
G86997 NA non-coding downstream 29769 77513819 ~ 77514118 (+)
G87000 NA non-coding downstream 31473 77515523 ~ 77515771 (+)
G87127 LOC106577135 non-coding downstream 53347 77537397 ~ 77538423 (+)
G87128 LOC106577135 non-coding downstream 55256 77539306 ~ 77539746 (+)
G87156 NA non-coding downstream 81065 77565115 ~ 77565465 (+)
G86614 NA other upstream 358057 77123935 ~ 77124427 (+)
G86019 NA other upstream 846548 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1022661 76457821 ~ 76459823 (+)
G83979 NA other upstream 2336972 75144864 ~ 75145512 (+)
G83829 NA other upstream 2368294 75112660 ~ 75114190 (+)
G87159 NA other downstream 85965 77570015 ~ 77570470 (+)
G89667 NA other downstream 2064967 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2267723 79720751 ~ 79765359 (+)
G91064 NA other downstream 3281064 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 4054281 81538331 ~ 81541400 (+)

Expression


Co-expression Network