LOC110529943 (LOC106577137)


Basic Information

Item Value
gene id LOC110529943
gene name LOC106577137
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77494045 ~ 77502290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612627.2
TAAGAAATTCCGCTTAATCCATTGGCTGTACATCTCGGATGAAGAACATTTAAAGTTGTGTTTGAAAATTCCGCACGATAGAGCGCCAGCGGTGACGGAAGTCATATTTGTTTAAAATTACTTATCTACAAGATAGTTGTTCAAAAGAAAGAATAGAGTTGACGTTTACAGTATTGAGTGTTCTGCAAACATGTCCACGCACAACTCGTTCAGTGTCGCAAAAAAGGATGAGAAGGGGAGAAATATTCAAGTCGTTGTGAGATGCAGACCCTTCAACAATGCGGAACGCAAGTCTGCCGCCCATGGAGTCATTGACACAGTAGAAAATCGAAAAGAGATCAATGTGCGAACGGGGGGAATTGGCGACAAGGCAGCTAGGAAGACGTACACCTTTGATATGGTGTTTGGTCCATCTGCCAAGCAAATTGATGTCTACAAGAGTGTTGTCTGCCCTATTTTGGATGAAGTGATAGGTGGATACAATTGTACAGTTTTTGCGTATGGCCAAACGGGAACAGGAAAGACTTTTACAATGGAAGGAGAAAGATCTCCAAATGAAGAATTTACTTGGGAAGAGGATCCTCTTGCTGGTATCATTCCCCGGACACTTCATCAGATATTTGAGAAGCTGTCTGAAAGTGGGACAGAGTTTTCTGTCAAGGTTTCCTTGCTGGAGATCTACAATGAAGAGTTGTTTGACCTGCTGAGCCCTTTTCCTGACGTCACTGAACGTCTTCAGTTGTTTGATGATCCACGTAACAAGAGGGGTGTTATCATCAAGGGCCTGGAAGAAATCACAGTACACAACAAAAATGAGGTTTACCAGATTTTGGAGCGTGGATCTGCCAAGAGGAAAACTGCCTCCACTCTCATGAATGCGTACTCCAGCCGCTCTCACTCAGTGTTCTCCGTCACGATTCATATGAAGGAGATAACTGTTGATGGAGAGGAACTGGTCAAGATTGGAAAACTGAACTTGGTTGACCTTGCTGGCAGTGAGAACATCGGTCGGTCCGGGGCTGTGGACAAGCGGGCGCGTGAGGCTGGCAACATCAACCAGTCTCTGCTGACACTGGGCAGGGTGATCACTGCACTGGTGGAGAAGAGGCCCCATGTGCCCTACAGGGAGTCCAAACTCACCCGCATCCTCCAGGACTCATTAGGAGGCCGCACTAAGACTTCCATCATTGCCACAGTTTCACCAGCCTCCATCaacttggagGAAACTCTGAGCACACTGGATTATGCCAACAGGGCCAAGAACATCATGAACAAGCCTGAGGTGAACCAGAAGTTGACAAAGAGAACTCTTATCAAGGAATACACAGAGGAAATTGAGCGTCTAAAACGGGATTTGGCTGCCACTCGTGACAAGAATGGAGTGTATCTGTCATCTGAGAACTATGAGAGCATGGCAGCTGCAATATCTTCCCAAGAGGATCACATAACTGAATACACAGAGAAGATTGCTGCAGTGGAGGAGGAACTGAAGAGCGTTACAGAGCTGTTTGAGGATCGCAAGGAGAAGCTGGACAAGTGCACCAATGACCTAGAGGAGAAGAACCAGAAGCTGCAGGAGACTCACAGGGACCTGCAGAAGACCAAGCAGAAGCTCACTGAGGAGGAGTTTATAGTGTCTGAGCTGGCGGCCACCGAGGAGAAACTGTACACCACTGCAGACAAGTTGCTGACAACTGTTGACGAAAGCACCAAAGACGTGTCTGGCCTGCATGCGAAGCTGGAGAGGAAGAAAAAGGTTGAGGTGCACAACTCTGAGATCCAGATGAGTTTCGCAGACTGCATGGATGCTATGTTCAGCCAGATGCAGAAATCTGTAGAAGACCAGCACAGCAAGCACCAGGGCATGCTGGACTCCTACAAAACCTCAGTTGAGGGTCTTCTTGCAGTCAACGACAAAGCTTTCAAAGGATCCATGGCTACTGTAGCCACGTCCTTCTGCAGCATCAAAGACCTGGTTGCTGATGGCATGACCAAGTGTCAGGCTAAGATGATGGAGCAGGAGACGCTGTGTGTGGAGGCTAAAAACAGTCTGCACCAGGTTTTGGAGGAACATAAGCTGGAGCTTGAGGAGGTCCTTGTGGCCCAGGTGTTGCCTGGTCTGAGTGCTGTCATGGCCATGAATGACAACCTGAGGAAGACACTGGAGACCCACCATGCCCTGGCAGCTAAGATGGAGTCCATGAAGGTGGAGACGGCGTCGTTCTTCAGTGGCCATGCCCAGGACCTGGCTACCCTGAGGGAGACTGCAACAGAAGGTCTCGGCTCCCTAAAGACTGAGCACGACAACCTGAAGGAACAGATCAGCAGAGCAGACAAGGAGCACCAGACGGGCATGACCCAGGTGATCCAGTGTCTGCAGAACCAGCTCAACCTCCTGGCCATGGAGACCCAGAATAACTATGCCGGCCTGATGAATGCCTCCGACGCCCTGCAGGTCCCTGTTCAGTCCCTTCAGCAGACCCTTCAAACGAGATGCAGTGTGTCTGAGAACCAGACCGCCACCCAAAAGGAACATCTAGAGTCTACCACTGCCAGCTTGATCTCTGAGGtccaacagactgtccaggaggcCATGCGCACAGTGGACGAGTCCTCCGGCTACTGCAGCCACTTGCACAGCTCTCTGACCCAGCTGGGTGAGAAGAGTCTGCAGTGGTGTGCCTCTACCGAAGATGGCATTGACTCCCAGACCCAGGCTCAGCTCACCCTGATCAGAGACCAAACCGCCTCTGCTCATACCCTGCTAACGAGAGTGGAGCAGAGCTGTGAGGAGAGAGTCCAGGAAGTGAGTGGGCAGctgaagcagcagcaggagatggTGAAGGAGGGTCTGGGGTCCATGAAGGAGCAGACGTCACTGGACCAGAACACCCTGGAACACCACCAGACGGAACTCAAGGCCCACTTGGAGGATGGCCTGGCCCGTGTCCACAGCTTCCTCAGCGATGAACTCCTACAGGATGTCCCAACTGGTGCAACTCCTCGGAGAAGGGACTTTGTGTACCCTCGTCTCCTGGCCAAGTCGAAGAGCAGAGCAGAACTGCTGGAGAACCTCTGCCACAAGCAGGAGGAGCTGCAGACGGCCCTGTTCCAGTGTGACGCATTGGAGGAGGAGAAGCAGGTTGATCAGGACTCTCTGGAGGATGAGGTGAGCGGCTATGGCTACGTCACTGAGACGCCTTACATAGACGAAAACCTCATGTGCTACGAGAACGGGAGAGTGCCGTTCTTCAAGCAAAAGAAGGCCGGCAAGAAAGAAAAATCTGTTAATCGTTCCAAGATGGTAGATAATGATACTCAGGCAACGCCGGTCAGGTCAAAGTTACCACTCAGGTGTCAGAACTAGTTCTAGATTTTCAAAAATTGTAGCCCCTCCATGAGTTTCACGGTTGATGTTGTGCTCCATCCACTCCGTTATCCACCACAAATCAGTCAATGGCCAAAAAGGGTAGAACTAGCGCACCTGCTTTTACACCATGATTTAACCATTAGATGTTCAGTGTTTATTTAGAAAAACATTTTAGGCTGCAATATGGACCTGACCAAATTCCAATAGaaatgttatagatctgtcattcaaAATGAAAGCAAGTAAAAAGTAATAGATCTGTTCTATGCTACCTGTTTTGTTTTTTGGGTGTTTtgattttgtacaccagcttcaaactgaaaatacaatatttttggttattgaaatatatttcacagcggtttagatggtacaatgattctgtacactatacattgcttgttttgtcgcaaactgaaattaggtaaactaagaattttagcaaccaggaaatggcagatttCTGCATACTGCACCTTTTTTTAAAGGagtagtttcaccatattaaaacaagTGATTCACGTGAAAGGGTTTACCTTCAAATCAGGAACTTTTTTTATACCTTAATGTATAAGTAATTACATTCAGAAGTGACTTTCAAAGCAACAATAAATAGGGCTTTCTAAAGGTGGTAAACATGAGATGTTGGTTAAAATGTCCTTTGCATACTCTGACTTCTAGGGAGATGCTAAAGTGCCAATAATCAGCATTTTgacaagtctttattcatataaaaTCTTCTGTTCTATATTAAAGGCACTTCATTATAATATAACATGCTTTTAAAATGAGGatttgtgcacaatttctacttaaaacaAAGGGGTGCAAAGTTATTTGTGGAACTGCCCTTTTCTGTCATTTTACTATTCATTGGTTCAAACCTTTGATTTATTAAAGTTGTTTTGACAAATGTAAA

Function

NR:

description
kinesin-like protein KIF11-B

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10398 KIF11, EG5; kinesin family member 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612627.2 True 4289 mRNA 0.47 23 77494045 77502290

Neighbor

gene id symbol gene type direction distance location
LOC110529936 aedo coding upstream 9995 77482484 ~ 77484050 (+)
LOC110529921 LOC106577139 coding upstream 25124 77460880 ~ 77468921 (+)
LOC110529906 LOC106577140 coding upstream 42703 77381858 ~ 77451342 (+)
LOC100136692 cdc2 coding upstream 148502 77339654 ~ 77345543 (+)
LOC118965545 NA coding upstream 206351 77286989 ~ 77287694 (+)
LOC110532710 NA coding downstream 7268 77509558 ~ 77512353 (+)
LOC110522259 LOC106577152 coding downstream 133969 77636259 ~ 77637356 (+)
LOC110529971 LOC106577133 coding downstream 143649 77645939 ~ 77647927 (+)
LOC110529985 LOC106577132 coding downstream 159992 77662282 ~ 77664950 (+)
LOC110529992 LOC106577130 coding downstream 250295 77752585 ~ 77763628 (+)
G86966 NA non-coding upstream 23298 77469998 ~ 77470747 (+)
G86978 NA non-coding upstream 31946 77461871 ~ 77462099 (+)
G86971 rtkn2 non-coding upstream 38745 77453917 ~ 77455300 (+)
G86950 NA non-coding upstream 57776 77376571 ~ 77436269 (+)
G86997 NA non-coding downstream 11529 77513819 ~ 77514118 (+)
G87000 NA non-coding downstream 13233 77515523 ~ 77515771 (+)
G87127 LOC106577135 non-coding downstream 35107 77537397 ~ 77538423 (+)
G87128 LOC106577135 non-coding downstream 37016 77539306 ~ 77539746 (+)
G87156 NA non-coding downstream 62825 77565115 ~ 77565465 (+)
G86614 NA other upstream 369618 77123935 ~ 77124427 (+)
G86019 NA other upstream 858109 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1034222 76457821 ~ 76459823 (+)
G83979 NA other upstream 2348533 75144864 ~ 75145512 (+)
G83829 NA other upstream 2379855 75112660 ~ 75114190 (+)
G87159 NA other downstream 67725 77570015 ~ 77570470 (+)
G89667 NA other downstream 2046727 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2249483 79720751 ~ 79765359 (+)
G91064 NA other downstream 3262824 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 4036041 81538331 ~ 81541400 (+)

Expression


Co-expression Network