LOC110532710


Basic Information

Item Value
gene id LOC110532710
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77509558 ~ 77512353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110532710
ATGTCCCTCGTCTGTTTCATGCTTACTCAGGAGTATGTGGGCAAGGCCTACTGGGCCATGACAGGCAGGACTCTCCCGGAGTCTCCCCGCTGGCTGTATTCCCGTGATTACACGGAGCAGGCGGAGGAGGTTCTGCAGTACATGGCCGTGCGGAATGGGAACGGCAACGCCACAGCCAAAGTGAAGCTCCGCAGGTGTCCTGGCTTCGTCAAGATGTAACTAGGACAACGATGGCCCTGGTCTCCTCGGTCTCGTCACCCACCTAGTGCTCCGCTGGAGGACCGTGGTGTCATGTATGTCTGGTATTCCTGCAGCCTGGTGTACAATGGGCTCATCGTGAATGCCAGTGAGGACGATGGGAACCGCTACTTCAGTGTTGTCATGTATGGATTGGTGGAGCTCCCGGCCTACCCTCTCTGTATCTATTTCATATACAAGCAGTGGAACGCTGGTCTTGGGGTCTGCTCAATGTCCTGCTGAGTCGGAGGGATCCTGGCCCCTCTTTTGCCCTCTACGACACTTTGTTTGAAGAGGACCAATTGAAAACAAGCCACAAACTAAATCAGTGACTattgtggaaggaccaccagagggcaggctgggctcacggatagtagcccaacaaggcatgggagacaaggtaaccagaggcaattaagcacagctgaaggtactaatgacatactctccttcccctataagagagagaatggaaccagcagagagggaaggggaaaactatctctggaagatggccaccgagcgagaggagctatccaggaagaaccactaag

Function

NR:

description
PREDICTED: solute carrier family 22 member 15

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110532710 True 794 mRNA 0.54 5 77509558 77512353

Neighbor

gene id symbol gene type direction distance location
LOC110529943 LOC106577137 coding upstream 7268 77494045 ~ 77502290 (+)
LOC110529936 aedo coding upstream 25508 77482484 ~ 77484050 (+)
LOC110529921 LOC106577139 coding upstream 40637 77460880 ~ 77468921 (+)
LOC110529906 LOC106577140 coding upstream 58216 77381858 ~ 77451342 (+)
LOC100136692 cdc2 coding upstream 164015 77339654 ~ 77345543 (+)
LOC110522259 LOC106577152 coding downstream 123906 77636259 ~ 77637356 (+)
LOC110529971 LOC106577133 coding downstream 133586 77645939 ~ 77647927 (+)
LOC110529985 LOC106577132 coding downstream 149929 77662282 ~ 77664950 (+)
LOC110529992 LOC106577130 coding downstream 240232 77752585 ~ 77763628 (+)
LOC118964491 NA coding downstream 917842 78430195 ~ 78431114 (+)
G86966 NA non-coding upstream 38811 77469998 ~ 77470747 (+)
G86978 NA non-coding upstream 47459 77461871 ~ 77462099 (+)
G86971 rtkn2 non-coding upstream 54258 77453917 ~ 77455300 (+)
G86950 NA non-coding upstream 73289 77376571 ~ 77436269 (+)
G86997 NA non-coding downstream 1466 77513819 ~ 77514118 (+)
G87000 NA non-coding downstream 3170 77515523 ~ 77515771 (+)
G87127 LOC106577135 non-coding downstream 25044 77537397 ~ 77538423 (+)
G87128 LOC106577135 non-coding downstream 26953 77539306 ~ 77539746 (+)
G87156 NA non-coding downstream 52762 77565115 ~ 77565465 (+)
G86614 NA other upstream 385131 77123935 ~ 77124427 (+)
G86019 NA other upstream 873622 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1049735 76457821 ~ 76459823 (+)
G83979 NA other upstream 2364046 75144864 ~ 75145512 (+)
G83829 NA other upstream 2395368 75112660 ~ 75114190 (+)
G87159 NA other downstream 57662 77570015 ~ 77570470 (+)
G89667 NA other downstream 2036664 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2239420 79720751 ~ 79765359 (+)
G91064 NA other downstream 3252761 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 4025978 81538331 ~ 81541400 (+)

Expression


Co-expression Network