slc29a1a (LOC106577101)


Basic Information

Item Value
gene id slc29a1a
gene name LOC106577101
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79956334 ~ 80033777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986434.1
ACTGCTTTCGGAATGAATGCAGCCCAGTTTACAAGTTTTGTCGTCAAATTAGTAGGCAACTGTAACGAATCTGTTGGGAAGATAGGAGAACACCCCACCAACTTTATGTGGCAGAAATGGAGCGCATTTTAATGTGACAGCATCACACCACTTCTGATCATTACCCGTGACACATTTTGACTTCAGAGCTGGTTCCTGCAGTACTTTAGGACAATGACAGCCATCAATGCTCCACAGGACAAGTATAATGCGGTGTGGATAATTTTCTTCATCCTTGGCTTGGGAACCCTCCTGCCATGGAACTTCTTCATGACTGCAACCATGTACTTCACCAGCCGACTGAAGGACCCGGCCATCGAAGGCTCAGTGAATCTGACGGCCAACGCCACGGTAGTGGAGGCAGACACGAGGAATGTCCTGGAGTCCAAGTTCAACAATGTGATGACCCTGTGTGCCATGGTGCCCCTGCTCATCTTCACCTGCCTTAACTCCTTCATCCACCAGAGGATCCCTCAGAATTTCCGTATCGCCGGCTCCCTGTCTGTGATCCTGTTGGTGTTCCTGTTGACGGCGGTGCTGGTCAAAGTGGACATGAGCCCTCTCCCCTTCTTCTGTCTCACCATGATCAAAATTATCTGCATCAATTCGTTTGGGGCAGTGCTGCAGGGCAGTTTGTTTGGTCTGGCTGGGATGCTGCCGGCCTCCTACACTGCACCTATCATGAGTGGACAGGGCCTCGCCGGGACCTTCGCTGCCTTCTCTATGATCTGTGCCCTGGCCAGTGGCTCGGCCCTACAGGACAGTGCCTTTGGCTACTTCATCACAGCGTGCGTGGTCGTCTTCCTGGCCATCTTGTCCTACTTTGCTCTGCCCAGAATGGACTTTTTCCAGTACTACCTGGAAAGTAATGGATCCAGGCCAGCCGGCAGAGATGAAGAGAACAAGATGGACCTTTTGGAAAAAGACAGCCCAGCACAGAAGAGGCCGGTGGTCAGTGTGACAGAGGAGGAAACCAGGTCCAACATATCTGTGTTTGCCATCTTTAAACGGATCTGGGTAATGGCCCTTTCTGTGTGCTTCGTGTTCACCATCACCATCGGAACATTCCCTGCAGTCACAGTTGACGTCAGGTCCACCGTGGCCGATGGGGGAGCCTGGGATAAATACTTCATCCCTGTGTCGTGTTTCCTGCTCTTCAACGTGATGGACTGGGCAGGCAGAAGTCTGACGGCCGTGTGTATGTGGCCCGGTAAGGACAGCATCATCCTGCCAGTCATGGTGGGTCTCCGTGTGGTCTTCGTGCCTCTCTTCATGCTGTGTAACGTCCAGCCCAGGAACTACCTGCCCGTGCCATTCGCCCACGACGCCTGGTACATCCTCTTCATGATCTTCTTCTCCTTCAGCAACGGATACCTGGCCAGCCTCTGCATGTGCTTCGGACCAAAGAAAGTGGCACAACATGAAGCGGAGACAGCCGGTGCCATCATGGCGTTCTTCCTGTCTCTGGGTTTGGCTCTGGGAGCAGCCCTGTCCTTCGTCTTCAGAATCATTATCTAGACCCAAAACACCCCTGAACACTTTCTTCTAACCAACCTGCCGTGGAGGAAGTGATGGGGTTTGGAGGAGGTGGTGAACTTTTCTGTTAATTGATTTGTTCTTCTCACATGGGAGCAACGCTAGTACACTCGGAAGCAGCCAGCCTCTGAGAGTCTGTGCTTCCCCTCCTGCCACTGACTGATGATACTCTTTCATTATGAAAGAATGCAAAGTTCATCTAGTTCAGCTGCCTATGTTACTGCTCTCATATCTTGTTCTAGTTGCCAACATCTATAATGTCTCTCTCATCCTCCAAGGACCATGGTGGAAGACAGGAGTTCTCTCCACTCAAGGGATTATTTCAGTTTATTGATCAAAATGCCGCTATGAGCCGTAAATTGTATGAGCCATGTATATTTATATGGATTGTGAAACTACCTGGATTCTTATATCTTGGTGTGTGTTATCATTGAATTGTATAGGCATTCTAAATCTCAATGGAGTTTTACCAGCCTACGTCAGTGTGTAAATGCTCATTGTGGTATAGCCTTGCCATGTAAAGGTATTTTATAGTATTTGAATATCTTTACCACAGTGACATATGTAGCTATTAATTACATGTGTTGTGCTAGTGAACGGTGAGGGTAGGAGAGTTTGTAAACTCACCTCATTTGTTCTGCCAGTTTGCCATTTTTGGGTTTTTTATTATCAAAACATTTTGTATCAGATCTAGTTCTGAGTGCTCTATTTTAAAACCGAATTGGCACAAGTTAAATTCGCCTGGTTCGTCTCAATCAGGTTGTTtttatgaataaaaaaaaaagaatgcaaCGTGCCGAGGGCTTTAAAGTacaacaaaatattttgctgtgcaaCCTTTTTAATTTGGGCGCACCAGTgcaacaaacgtgtgtgtgtgtgttcataattGTAATAAGGCTTTGCTCTACTGTTGTTTCCCAAGCGCATAATCATTAGCGTCATGCTTGCACCATTACTACAGAGAAAACTGCTTGTTTctagcccaaacagttcgaaaGATCTTTGGCCCATATTACAGGTGGAACGTTTTTTATATTTTCCTGTAAAGGATTGGGGGGGGGGCTGCATTTTACATTCATAAACCGTTCTAAAAGTC
>XM_021613149.2
TGTGCAACAGAAACGGTCAACGTTACAagatgtaatgaatacacccctgtcaCTTCATGAGCTGGGGATATCCATGCGGCGACTCACTATTTCGTAAATTCGGAATCTAATCTGGACAGCGTTGAGGATAGACTACTCTTCTCACGCTAAGTACCCGTGACACATTTTGACTTCAGAGCTGGTTCCTGCAGTACTTTAGGACAATGACAGCCATCAATGCTCCACAGGACAAGTATAATGCGGTGTGGATAATTTTCTTCATCCTTGGCTTGGGAACCCTCCTGCCATGGAACTTCTTCATGACTGCAACCATGTACTTCACCAGCCGACTGAAGGACCCGGCCATCGAAGGCTCAGTGAATCTGACGGCCAACGCCACGGTAGTGGAGGCAGACACGAGGAATGTCCTGGAGTCCAAGTTCAACAATGTGATGACCCTGTGTGCCATGGTGCCCCTGCTCATCTTCACCTGCCTTAACTCCTTCATCCACCAGAGGATCCCTCAGAATTTCCGTATCGCCGGCTCCCTGTCTGTGATCCTGTTGGTGTTCCTGTTGACGGCGGTGCTGGTCAAAGTGGACATGAGCCCTCTCCCCTTCTTCTGTCTCACCATGATCAAAATTATCTGCATCAATTCGTTTGGGGCAGTGCTGCAGGGCAGTTTGTTTGGTCTGGCTGGGATGCTGCCGGCCTCCTACACTGCACCTATCATGAGTGGACAGGGCCTCGCCGGGACCTTCGCTGCCTTCTCTATGATCTGTGCCCTGGCCAGTGGCTCGGCCCTACAGGACAGTGCCTTTGGCTACTTCATCACAGCGTGCGTGGTCGTCTTCCTGGCCATCTTGTCCTACTTTGCTCTGCCCAGAATGGACTTTTTCCAGTACTACCTGGAAAGTAATGGATCCAGGCCAGCCGGCAGAGATGAAGAGAACAAGATGGACCTTTTGGAAAAAGACAGCCCAGCACAGAAGAGGCCGGTGGTCAGTGTGACAGAGGAGGAAACCAGGTCCAACATATCTGTGTTTGCCATCTTTAAACGGATCTGGGTAATGGCCCTTTCTGTGTGCTTCGTGTTCACCATCACCATCGGAACATTCCCTGCAGTCACAGTTGACGTCAGGTCCACCGTGGCCGATGGGGGAGCCTGGGATAAATACTTCATCCCTGTGTCGTGTTTCCTGCTCTTCAACGTGATGGACTGGGCAGGCAGAAGTCTGACGGCCGTGTGTATGTGGCCCGGTAAGGACAGCATCATCCTGCCAGTCATGGTGGGTCTCCGTGTGGTCTTCGTGCCTCTCTTCATGCTGTGTAACGTCCAGCCCAGGAACTACCTGCCCGTGCCATTCGCCCACGACGCCTGGTACATCCTCTTCATGATCTTCTTCTCCTTCAGCAACGGATACCTGGCCAGCCTCTGCATGTGCTTCGGACCAAAGAAAGTGGCACAACATGAAGCGGAGACAGCCGGTGCCATCATGGCGTTCTTCCTGTCTCTGGGTTTGGCTCTGGGAGCAGCCCTGTCCTTCGTCTTCAGAATCATTATCTAGACCCAAAACACCCCTGAACACTTTCTTCTAACCAACCTGCCGTGGAGGAAGTGATGGGGTTTGGAGGAGGTGGTGAACTTTTCTGTTAATTGATTTGTTCTTCTCACATGGGAGCAACGCTAGTACACTCGGAAGCAGCCAGCCTCTGAGAGTCTGTGCTTCCCCTCCTGCCACTGACTGATGATACTCTTTCATTATGAAAGAATGCAAAGTTCATCTAGTTCAGCTGCCTATGTTACTGCTCTCATATCTTGTTCTAGTTGCCAACATCTATAATGTCTCTCTCATCCTCCAAGGACCATGGTGGAAGACAGGAGTTCTCTCCACTCAAGGGATTATTTCAGTTTATTGATCAAAATGCCGCTATGAGCCGTAAATTGTATGAGCCATGTATATTTATATGGATTGTGAAACTACCTGGATTCTTATATCTTGGTGTGTGTTATCATTGAATTGTATAGGCATTCTAAATCTCAATGGAGTTTTACCAGCCTACGTCAGTGTGTAAATGCTCATTGTGGTATAGCCTTGCCATGTAAAGGTATTTTATAGTATTTGAATATCTTTACCACAGTGACATATGTAGCTATTAATTACATGTGTTGTGCTAGTGAACGGTGAGGGTAGGAGAGTTTGTAAACTCACCTCATTTGTTCTGCCAGTTTGCCATTTTTGGGTTTTTTATTATCAAAACATTTTGTATCAGATCTAGTTCTGAGTGCTCTATTTTAAAACCGAATTGGCACAAGTTAAATTCGCCTGGTTCGTCTCAATCAGGTTGTTtttatgaataaaaaaaaaagaatgcaaCGTGCCGAGGGCTTTAAAGTacaacaaaatattttgctgtgcaaCCTTTTTAATTTGGGCGCACCAGTgcaacaaacgtgtgtgtgtgtgttcataattGTAATAAGGCTTTGCTCTACTGTTGTTTCCCAAGCGCATAATCATTAGCGTCATGCTTGCACCATTACTACAGAGAAAACTGCTTGTTTctagcccaaacagttcgaaaGATCTTTGGCCCATATTACAGGTGGAACGTTTTTTATATTTTCCTGTAAAGGATTGGGGGGGGGGCTGCATTTTACATTCATAAACCGTTCTAAAAGTC

Function

NR:

description
equilibrative nucleoside transporter 1-like

GO: NA

KEGG:

id description
K15014 SLC29A1_2_3, ENT1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986434.1 False 2674 mRNA 0.47 13 79956334 80033777
XM_021613149.2 True 2664 mRNA 0.47 13 80002431 80033777

Neighbor

gene id symbol gene type direction distance location
vip LOC106577104 coding upstream 27425 79924696 ~ 79928909 (+)
bcl2l11 bcl2l11 coding upstream 174087 79766233 ~ 79782247 (+)
acoxl acoxl coding upstream 190975 79720751 ~ 79765359 (+)
LOC110530167 st6b1 coding upstream 238388 79708170 ~ 79717946 (+)
LOC110530152 LOC106577111 coding upstream 389765 79563587 ~ 79566569 (+)
arhgef33 LOC106577154 coding downstream 214322 80248099 ~ 80267460 (+)
LOC110530346 LOC106577158 coding downstream 326039 80359816 ~ 80364026 (+)
LOC110530352 LOC106577159 coding downstream 349789 80383566 ~ 80386413 (+)
LOC110532748 LOC106577167 coding downstream 980928 81014705 ~ 81056605 (+)
LOC110530417 LOC106577168 coding downstream 1023218 81056995 ~ 81078956 (+)
G89893 NA non-coding upstream 64591 79888583 ~ 79891743 (+)
G89891 NA non-coding upstream 66289 79886679 ~ 79890045 (+)
G89865 NA non-coding upstream 104070 79847107 ~ 79852264 (+)
G89735 NA non-coding upstream 217766 79638891 ~ 79738568 (+)
G89984 LOC106577100 non-coding downstream 19173 80052950 ~ 80058335 (+)
G90055 NA non-coding downstream 143827 80177604 ~ 80178075 (+)
G90446 NA non-coding downstream 183935 80217712 ~ 80218052 (+)
G90527 NA non-coding downstream 321542 80355319 ~ 80355724 (+)
G89667 NA other upstream 406683 79549017 ~ 79549651 (+)
G87159 NA other upstream 2385864 77570015 ~ 77570470 (+)
G86614 NA other upstream 2831907 77123935 ~ 77124427 (+)
G86019 NA other upstream 3320398 76631745 ~ 76635936 (+)
G91064 NA other downstream 731337 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 1504554 81538331 ~ 81541400 (+)
G91779 NA other downstream 1843762 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 1872355 81906132 ~ 81907399 (+)
LOC110530572 LOC106577202 other downstream 2094867 82128619 ~ 82163498 (+)

Expression


Co-expression Network