slc8a1b (LOC106577160)


Basic Information

Item Value
gene id slc8a1b
gene name LOC106577160
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 80409477 ~ 80647140 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986617.1
GTTTCCCTTTGCTCTTTCTGAAATCGATGTGGATAGAATAATCCCCGAGCTGTGGGAAAAAGTGTATTCCGGGAGTTTGTCCGTCTCTACAGAAGCAGCCCGCGTTCTAAACGCACTTTGGACTCGGTCTCTGTGCATGGAGCTCTGTGGCTGTCCACACATCGAATAGGATAGGAAAGAGGTTGAGTGAGAGAAGGCGagtgaaagcgagagagagagagagaggggggggggaaataatCAGGAAGAACTCTCAGCGCACCTTTTAGTTCTCCAATATGCAGATTTGCTGATAAAACATCAGTTATCTGTTCATCTCATACAGGTCGTGGAAAACTGCGAGTGCATGGGAATCTTTAACTCGTTTTTTCTTCACCGGGGTATCTCGCCTTGATTTCGTATAAAACCCAGCACGAATGTGAGCTGTAATACCAGGCTACTGACGGCTCTAGCGGCTCCTTATTGGCATTTTCACGTCTaggctactacaactactattgcTGTCTTCTGCCTGTGGATTTGACCGTTATATATTGTGAAAGgTTTAGGAAGCAGAGGAAGCTCACCACTCCAGAATCATGGGACACTTTCAGCTCTCCCCCATGCTCTCCCTTGGTCTCCGGCTTGTGGTTGTCGTAGCAATCATGTTTCTCAAATTCCAACATGTGACGGCTATGTCCTCGGACGTGGACTTGGATCAGTTTGTGTCTCCAACTGCCAGCGGCAATGTTACTGTGTGCACCACAGCAGGCACAGCATGCGAAAAAGGGGTGATTCTGCCTATCTGGGAACCTCAGAATCCCTCGTTTGGGGACAAAGTGGCACGGGCGACAGTCTATTTCGTGGCTCTGGTGTACATGTTCCTCGGAGTGTCCATCATCGCTGACCGTTTCATGGCATCCATCGAGGTCATCACCTCTCAGGAGAAAGAGATCACCATCAAGAGACCCAACGGagagaccaccaccaccaccgtgcGGATCTGGAACGAGACAGTGTCCAATCTCACGCTCATGGCCCTGGGTTCGAGTGCCCCTGAGATCCTACTGTCCGTCATTGAGGTTTGCGGCCACGGTTTTGATGCAGGAGCCTTGGGTCCAAGCACTATCGTGGGCAGCGCTGCCTTCAACATGTTTGTCATCATTGGCATCTGTGTGTACGTGGTGCCCGACGGGGAGGTCCGTAAGGTCAAGCACCTGCGCGTCTTCTTCGTCACAGCCACCTGGAGCATCTTCGCCTACATCTGGCTCTACCTGATACTGGCTGTCATCTCCCCCGGCATAGTGCAGGTATGGGAGGGCCTGCTCACCCTCTTCTTCTTCCCCATCTGCGTGTTGTTCGCCTGGGTCGCTGACCGACGCCTCCTCTTCTACAAGTACGTCTACAAGCGCTACCGTACCGGCAAGCAGCGAGGCATGATCATTGAAACCGAGGGTGACCGCCCGCTCCCGTCCAAAGTCGACATCGAGATGGACGGAAAGATGCTCAACTCTCACGCGGTGGACTTCCTGGACGGGCCTCTGGGGCTGGAGCTGAACATGAAGGACCTGGATGAGGAGGAGACCCGGCGCGACATGGCCAAGATCCTCAAGGAGCTGAAGCAGAAGCACCCAGATAAGGAGATGGAGCAGCTGATTGAACTGGCCAACTACCAGGTGTTGAGTTCGCAGCAGAAGAGCAGGGCCTTCTACCGCTGCCAGGCCACCAGGCTCATGACCGGCGCTGGGAACATCCTGAAGAAGCATGCAGCCGACCAGGCCCGCAAGGCCGTCAGCTTGCACGAGGTTCGCTCTGATGTGGCTGATAACGACCCCATTTCCAAGATCTACTTTGACCCCGGCTCCTACCAGTGCCTGGAGAACTGCGGCACAGTGGCAGTTAACGTGCTACGGCGAGGCGGTGACCTGACCAAGACAGTGTCGGTGGAGTTCCGTACGGAGGATGGATCAGCCAACGCGGGCTCGGACTACGAGTTCACCGAGGGGGTGGTGGTGTTCAAGCCCGGCGAGACCCAGAAGGAGATCCGTGTGGGCATCATTGATGATGACATCTTTGAGGAGGATGAGAACTTCCTGATCCACCTGAGCAACGTCAAAGTGCTgctggcagagggagaggaggtagagaaccCAGAGACCAATCACGTGGAGGCGGTGGCCTGTCTCGGCCTGCCTGCCACGGCAACCGTGACCATCTTTGACGACGACCACGCCGGCATCTTCACGTTCGAGGAGCCGGTGGCACACGTGAGTGAGAGTGTGGGCACCATGGAGGTGAAGGTGCTGCGTACGTCAGGGGCACGTGGGGTCGTCATGGTGCCCTACAAGACTGTGGAGGGCACGGcacgtggaggaggagaggattttGAAGATACCCACGGGGTCCTGGAGTTCCAGAACGATGAAATCTTcAAAATGATCAAGGTCAGAATCGTTGACGACGAGGAGTATGAGAAAAACAAGACCTTCTACTTGGAGATGGGAGAGCCTCGCCTGATGGAGACCAATGACAGTAAAGCTACAGAGGTGGCTGTgaaggaggtggaagaggagatgCCCCTGACAGAAGTGGATGATGAGGACCAACGCATCGCTGATATGGGCCGACCCACACTGGGGGACCACGTCAAACTTGAAATCATCATTGAGGAATCCTACGAGTttaagAACACTGTGGACAAGCTGATTAAGAAGACAAACCTGGCCCTGCTGGTGGGGACTAACAGCTGGAGAGACCAGTTCATCGAGGCCATCACTGTCAGTGCCGGTGAGGATGACGAGGATGAAGAATGCGGCGAGGAGAAGCTGCCGTCCTGCTTCGACTACGTCATGCACTTCCTCACcgtcttctggaaggttctgttTGCGTTCGTGCCCCCAACAGACTACTGGAATGGCTGGGCCTGCTTTGTGGTGTCCATCTGCATGATCGGCCTGCTTACAGCCTTCATCGGGGACCTGGCCTCCCACTTCGGCTGCACTGTGGGCCTCAAGGACTCTGTCACCGCCGTGGTGTTCGTTGCACTGGGGACCTCTGTGCCAGATACCTTTGCCAGTAAGGTGGCAGCCATCCAGGACCAGTATGCTGACGCATCCATCGGCAACGTGACGGGCAGCAACGCGGTCAATGTGTTCCTGGGCATCGGCGTGGCCTGGTCCATCGCTGCCATCTACCACAACTCCAAGGGCAACGACTTCAAGGTAGACCCGGGGAGCCTGGCCTTCTCCGTCACTCTCTTCACCATCTTCGCCTTCATCTGCGTGGGGGTGCTGATGTACCGGAGGCGACCTTCGATCGGCGGCGAGCTGGGAGGTCCGCGGACTCCCAAgatactgaccaccatgctgttTGTCAGCCTGTGGCTGCTGTACATTCTGTTCTCCTCGCTGGAGGTCTACTGCCACTTCAAGGCCTTCTAAACAGCATCAGACTTAAGAAGGCCCAAGAAGAGCTAACCAGAGACAAGAAGGAGGCAACAGCAGTGGTGAAAAACATTTTCCTCTTGTCATTAATAAACCCCCCTTTCCCCCTATCCCCCTTTTAAGAAGTGAAAGAtatgccccccccctcctctgtccccatGGTCTAGTGCTTAATGGATGAAACTGGTTGTTAAGGCGAGGAGAGGCCTGTCAAGGCTAGGACAGACACCCCTCTGAAGTCTGTAAAATGgcagttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgt
>XM_036986620.1
CGTTTCCCTTTGCTCTTTCTGAAATCGATGTGGATAGAATAATCCCCGAGCTGTGGGAAAAAGTGTATTCCGGGAGTTTGTCCGTCTCTACAGAAGCAGCCCGCGTTCTAAACGCACTTTGGACTCGGTCTCTGTGCATGGAGCTCTGTGGCTGTCCACACATCGAATAGGATAGGAAAGAGGTTGAGTGAGAGAAGGCGagtgaaagcgagagagagagagagaggggggggggaaataatCAGGAAGAACTCTCAGCGCACCTTTTAGTTCTCCAATATGCAGATTTGCTGATAAAACATCAGTTATCTGTTCATCTCATACAGGTCGTGGAAAACTGCGAGTGCATGGGAATCTTTAACTCGTTTTTTCTTCACCGGGGTATCTCGCCTTGATTTCGTATAAAACCCAGCACGAATGTGAGCTGTAATACCAGGCTACTGACGGCTCTAGCGGCTCCTTATTGGCATTTTCACGTCTaggctactacaactactattgcTGTCTTCTGCCTGTGGATTTGACCGTTATATATTGTGAAAGgTTTAGGAAGCAGAGGAAGCTCACCACTCCAGAATCATGGGACACTTTCAGCTCTCCCCCATGCTCTCCCTTGGTCTCCGGCTTGTGGTTGTCGTAGCAATCATGTTTCTCAAATTCCAACATGTGACGGCTATGTCCTCGGACGTGGACTTGGATCAGTTTGTGTCTCCAACTGCCAGCGGCAATGTTACTGTGTGCACCACAGCAGGCACAGCATGCGAAAAAGGGGTGATTCTGCCTATCTGGGAACCTCAGAATCCCTCGTTTGGGGACAAAGTGGCACGGGCGACAGTCTATTTCGTGGCTCTGGTGTACATGTTCCTCGGAGTGTCCATCATCGCTGACCGTTTCATGGCATCCATCGAGGTCATCACCTCTCAGGAGAAAGAGATCACCATCAAGAGACCCAACGGagagaccaccaccaccaccgtgcGGATCTGGAACGAGACAGTGTCCAATCTCACGCTCATGGCCCTGGGTTCGAGTGCCCCTGAGATCCTACTGTCCGTCATTGAGGTTTGCGGCCACGGTTTTGATGCAGGAGCCTTGGGTCCAAGCACTATCGTGGGCAGCGCTGCCTTCAACATGTTTGTCATCATTGGCATCTGTGTGTACGTGGTGCCCGACGGGGAGGTCCGTAAGGTCAAGCACCTGCGCGTCTTCTTCGTCACAGCCACCTGGAGCATCTTCGCCTACATCTGGCTCTACCTGATACTGGCTGTCATCTCCCCCGGCATAGTGCAGGTATGGGAGGGCCTGCTCACCCTCTTCTTCTTCCCCATCTGCGTGTTGTTCGCCTGGGTCGCTGACCGACGCCTCCTCTTCTACAAGTACGTCTACAAGCGCTACCGTACCGGCAAGCAGCGAGGCATGATCATTGAAACCGAGGGTGACCGCCCGCTCCCGTCCAAAGTCGACATCGAGATGGACGGAAAGATGCTCAACTCTCACGCGGTGGACTTCCTGGACGGGCCTCTGGGGCTGGAGCTGAACATGAAGGACCTGGATGAGGAGGAGACCCGGCGCGACATGGCCAAGATCCTCAAGGAGCTGAAGCAGAAGCACCCAGATAAGGAGATGGAGCAGCTGATTGAACTGGCCAACTACCAGGTGTTGAGTTCGCAGCAGAAGAGCAGGGCCTTCTACCGCTGCCAGGCCACCAGGCTCATGACCGGCGCTGGGAACATCCTGAAGAAGCATGCAGCCGACCAGGCCCGCAAGGCCGTCAGCTTGCACGAGGTTCGCTCTGATGTGGCTGATAACGACCCCATTTCCAAGATCTACTTTGACCCCGGCTCCTACCAGTGCCTGGAGAACTGCGGCACAGTGGCAGTTAACGTGCTACGGCGAGGCGGTGACCTGACCAAGACAGTGTCGGTGGAGTTCCGTACGGAGGATGGATCAGCCAACGCGGGCTCGGACTACGAGTTCACCGAGGGGGTGGTGGTGTTCAAGCCCGGCGAGACCCAGAAGGAGATCCGTGTGGGCATCATTGATGATGACATCTTTGAGGAGGATGAGAACTTCCTGATCCACCTGAGCAACGTCAAAGTGCTgctggcagagggagaggaggtagagaaccCAGAGACCAATCACGTGGAGGCGGTGGCCTGTCTCGGCCTGCCTGCCACGGCAACCGTGACCATCTTTGACGACGACCACGCCGGCATCTTCACGTTCGAGGAGCCGGTGGCACACGTGAGTGAGAGTGTGGGCACCATGGAGGTGAAGGTGCTGCGTACGTCAGGGGCACGTGGGGTCGTCATGGTGCCCTACAAGACTGTGGAGGGCACGGcacgtggaggaggagaggattttGAAGATACCCACGGGGTCCTGGAGTTCCAGAACGATGAAATCTTGAAGACCATAGCCATTAAAATACTTGACCGTGAGGTGTATGATAAACACAGCTACTTCACCCTAGAGCTGCAGACGCCACAATGGAGAAGGAGAGGCCGGACAGCTACAGAGGTGGCTGTgaaggaggtggaagaggagatgCCCCTGACAGAAGTGGATGATGAGGACCAACGCATCGCTGATATGGGCCGACCCACACTGGGGGACCACGTCAAACTTGAAATCATCATTGAGGAATCCTACGAGTttaagAACACTGTGGACAAGCTGATTAAGAAGACAAACCTGGCCCTGCTGGTGGGGACTAACAGCTGGAGAGACCAGTTCATCGAGGCCATCACTGTCAGTGCCGGTGAGGATGACGAGGATGAAGAATGCGGCGAGGAGAAGCTGCCGTCCTGCTTCGACTACGTCATGCACTTCCTCACcgtcttctggaaggttctgttTGCGTTCGTGCCCCCAACAGACTACTGGAATGGCTGGGCCTGCTTTGTGGTGTCCATCTGCATGATCGGCCTGCTTACAGCCTTCATCGGGGACCTGGCCTCCCACTTCGGCTGCACTGTGGGCCTCAAGGACTCTGTCACCGCCGTGGTGTTCGTTGCACTGGGGACCTCTGTGCCAGATACCTTTGCCAGTAAGGTGGCAGCCATCCAGGACCAGTATGCTGACGCATCCATCGGCAACGTGACGGGCAGCAACGCGGTCAATGTGTTCCTGGGCATCGGCGTGGCCTGGTCCATCGCTGCCATCTACCACAACTCCAAGGGCAACGACTTCAAGGTAGACCCGGGGAGCCTGGCCTTCTCCGTCACTCTCTTCACCATCTTCGCCTTCATCTGCGTGGGGGTGCTGATGTACCGGAGGCGACCTTCGATCGGCGGCGAGCTGGGAGGTCCGCGGACTCCCAAgatactgaccaccatgctgttTGTCAGCCTGTGGCTGCTGTACATTCTGTTCTCCTCGCTGGAGGTCTACTGCCACTTCAAGGCCTTCTAAACAGCATCAGACTTAAGAAGGCCCAAGAAGAGCTAACCAGAGACAAGAAGGAGGCAACAGCAGTGGTGAAAAACATTTTCCTCTTGTCATTAATAAACCCCCCTTTCCCCCTATCCCCCTTTTAAGAAGTGAAAGAtatgccccccccctcctctgtccccatGGTCTAGTGCTTAATGGATGAAACTGGTTGTTAAGGCGAGGAGAGGCCTGTCAAGGCTAGGACAGACACCCCTCTGAAGTCTGTAAAATGgcagttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcgtgcgtgcgt

Function

NR:

description
PREDICTED: sodium/calcium exchanger 1-like isoform X2

GO: NA

KEGG:

id description
K05849 SLC8A, NCX; solute carrier family 8 (sodium/calcium exchanger)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986617.1 False 3788 mRNA 0.55 7 80409477 80647139
XM_036986620.1 True 3786 mRNA 0.55 7 80409477 80647140

Neighbor

gene id symbol gene type direction distance location
thumpd2 thumpd2 coding downstream 32553 80364027 ~ 80376924 (-)
LOC110530293 LOC106577155 coding downstream 59634 80266640 ~ 80349843 (-)
LOC110530266 LOC106577153 coding downstream 173047 80221016 ~ 80236430 (-)
LOC110530258 LOC106577097 coding downstream 271025 80072570 ~ 80138452 (-)
LOC110530250 LOC106577100 coding downstream 351125 80035286 ~ 80058352 (-)
LOC110530369 LOC106577163 coding upstream 256197 80903337 ~ 80905779 (-)
LOC118965579 LOC106577163 coding upstream 272808 80919948 ~ 80922357 (-)
nphp1 LOC106577164 coding upstream 293075 80940215 ~ 80966643 (-)
LOC110530390 LOC106577181 coding upstream 328852 80975992 ~ 80991714 (-)
ppifa LOC106577170 coding upstream 521662 81168802 ~ 81174063 (-)
G90799 NA non-coding downstream 53120 80356137 ~ 80356357 (-)
G90798 NA non-coding downstream 53345 80355908 ~ 80356132 (-)
G90744 NA non-coding downstream 171709 80236784 ~ 80237768 (-)
G90443 NA non-coding downstream 193909 80214799 ~ 80215568 (-)
G90439 NA non-coding downstream 198249 80211009 ~ 80211228 (-)
G90994 NA non-coding upstream 17228 80664368 ~ 80754269 (-)
G91031 NA non-coding upstream 80160 80727300 ~ 80727679 (-)
G91067 NA non-coding upstream 120417 80767557 ~ 80768021 (-)
G91101 NA non-coding upstream 148128 80795268 ~ 80795504 (-)
G91127 NA non-coding upstream 164092 80811232 ~ 80811456 (-)
G90382 NA other downstream 267320 80141559 ~ 80142157 (-)
LOC110530200 NA other downstream 511637 79862081 ~ 79917875 (-)
G90190 NA other downstream 521297 79886675 ~ 79888180 (-)
G90081 NA other downstream 873905 79534758 ~ 79535572 (-)
G89418 NA other downstream 1358986 79049811 ~ 79050491 (-)
G91941 NA other upstream 380768 81027908 ~ 81028612 (-)
G91943 LOC106577167 other upstream 383692 81030832 ~ 81031358 (-)
G91947 NA other upstream 388435 81035575 ~ 81036138 (-)
LOC110532756 LOC106577174 other upstream 533684 81175845 ~ 81449471 (-)

Expression


Co-expression Network