LOC118965579 (LOC106577163)


Basic Information

Item Value
gene id LOC118965579
gene name LOC106577163
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 80919948 ~ 80922357 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986646.1
GCTTTAAAGGCAGAAGTGTTTAGGTCACAGGTCTCACTTTAGAGAGAACTGTGTTGGGCACACTCCCACATCAACAAAACGCCAACACACAGGTAGACCTTGACACTTTGGGAATATGGCTTCCAGCGCCTCCACTAACCCTCTGCCCAGTGGCACCAGTGTGTTCACCACTGTTCCAGACCTCTTCTTCATCCCTGAGTTTATATTCGGAGGTCTGGTGTGGACTCTGGTGGCCTCCACAAAAGTGCTGATTGCGAACCCTCAGGGCTGGGTgatgtttgtctctgtgttctgCTTCATCTTCACTACCCTGTGGTTCCTCATCTTCATCAGTGGAGCCAATAAGAGCAGCATCTGGCCTACACTGgatgttgtgtatcatTCCCTTGCAGCCTTCTTCTACCTCAGTGCAGCAGTGGTACAGGCCTACATCACCATTAGTCTGAAATCAGTTACCAGTACTTTCTTCAAAGAATACCAATTGGATATTGCTGCAGTGGTGATGTGTTATGTGGTGACTCTGCTCTACACCCTCCATGCCATCTTCTCTACGATGAGATGGAAGAGTTCCTCATGAAGACCAGCATCCACAAGACAACAGACAAAGGGACAACAGACATTAGAGAAGGCTTTGATATGACATCAATTGTAATCTATCTTTATTTCTACATTATTTTCTTCCTGCAAATACCGTAAACCAATTTGGAGTGAAATGCATATACAATATAAAtaaaaagataaataaatatattttatacttaa

Function

NR:

description
myelin and lymphocyte protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986646.1 True 762 mRNA 0.44 4 80919948 80922357

Neighbor

gene id symbol gene type direction distance location
LOC110530369 LOC106577163 coding downstream 14169 80903337 ~ 80905779 (-)
slc8a1b LOC106577160 coding downstream 272808 80409477 ~ 80647140 (-)
thumpd2 thumpd2 coding downstream 543024 80364027 ~ 80376924 (-)
LOC110530293 LOC106577155 coding downstream 570105 80266640 ~ 80349843 (-)
LOC110530266 LOC106577153 coding downstream 683518 80221016 ~ 80236430 (-)
nphp1 LOC106577164 coding upstream 17858 80940215 ~ 80966643 (-)
LOC110530390 LOC106577181 coding upstream 53635 80975992 ~ 80991714 (-)
ppifa LOC106577170 coding upstream 246445 81168802 ~ 81174063 (-)
LOC110532756 LOC106577174 coding upstream 253488 81175845 ~ 81449471 (-)
LOC118965609 NA coding upstream 543193 81465550 ~ 81532357 (-)
G91198 NA non-coding downstream 57926 80861804 ~ 80862022 (-)
G91169 NA non-coding downstream 77897 80841760 ~ 80842051 (-)
G91160 NA non-coding downstream 82947 80836784 ~ 80837001 (-)
G91147 NA non-coding downstream 93011 80826728 ~ 80826937 (-)
G91142 NA non-coding downstream 97796 80821945 ~ 80822152 (-)
G91928 NA non-coding upstream 92176 81014533 ~ 81015155 (-)
G91930 NA non-coding upstream 93779 81016136 ~ 81016356 (-)
G91932 NA non-coding upstream 96463 81018820 ~ 81019368 (-)
G91939 NA non-coding upstream 100894 81023251 ~ 81023528 (-)
G91942 NA non-coding upstream 106317 81028674 ~ 81029019 (-)
G90382 NA other downstream 777791 80141559 ~ 80142157 (-)
LOC110530200 NA other downstream 1022108 79862081 ~ 79917875 (-)
G90190 NA other downstream 1031768 79886675 ~ 79888180 (-)
G90081 NA other downstream 1384376 79534758 ~ 79535572 (-)
G89418 NA other downstream 1869457 79049811 ~ 79050491 (-)
G91941 NA other upstream 105551 81027908 ~ 81028612 (-)
G91943 LOC106577167 other upstream 108475 81030832 ~ 81031358 (-)
G91947 NA other upstream 113218 81035575 ~ 81036138 (-)

Expression


Co-expression Network