ppifa (LOC106577170)


Basic Information

Item Value
gene id ppifa
gene name LOC106577170
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81168802 ~ 81174063 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613479.2
TCATGTGTACACACCCCCATCCTCGGAACTTCATGTTGACAACTATGCAAAGATGTTGCAAATGAAAAATCGTATAAAATATTGCTCTTTGGCAATTGCTGCGACCAGGTTGTTTTCGTCTGGACCCGTCAAAAATCCAGTCGTGTATTTTGACATCGCAGCTGACAACGAACCTCTGGGACGAATCATTATAGAGTTGAATGCAGCTGCTGTGCCCAAAACAGCAGAGAACTTTAGAGCACTGTGCACTGGGGAACATGGCTTTGGATACAAAGGATCAGTGTTCCACAGAGTGATTCCTGAGTTCATGTGTCAGGGAGGAGATTTCACGCATCACAACGGGACGGGAGGGAAGTCCATATACGGGACCAAGTTTAAAGACGAGAACTTCAAACTGAAACACAATGGGCCAGGTATCTTATCCATGGCAAATTCAGGGGCGAACACGAACGGTTCTCAGTTCTTCATCTGCACAGTTAAAACTGAATGgtTGAATGATAAGCATGTGGTCTTTGGTCAGGTGAAGGAGGGCATGGAGGTAGTCTTCAAGATGGAATCCTTTGGTTGTCATGACGGTGGTGTGGTAAAGAAAATCGCCATCACGGACTGTGGGGAGATCAagtaaaacacacagacagacaggttggagAAGGTCACTATGGACAACAACTCTTGGAAACGTCCAATTTTGTAAACGTTTTTTAACTCTTCTGTTTTCCTCACCCAATTAAAAAATGAAAACCACAAATACACCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTCTGTCTTTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTTTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTATTGTTAGCTGTCTCTCATCCATGTAGTCTATTGTCAGCTGTCTCTCATACATGTAGTCTATTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACAGGTAGTATCTTGTCAGCTGTCTCTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGT
>XM_036986800.1
ACGTCATGTGTACACACCCCCATCCTCGGAACTTCATGTTGACAACTATGCAAAGATGTTGCAAATGAAAAATCGTATAAAATATTGCTCTTTGGCAATTGCTGCGACCAGGTTGTTTTCGTCTGGACCCGTCAAAAATCCAGTCGTGTATTTTGACATCGCAGCTGACAACGAACCTCTGGGACGAATCATTATAGAGTTGAATGCAGCTGCTGTGCCCAAAACAGCAGAGAACTTTAGAGCACTGTGCACTGGGGAACATGGCTTTGGATACAAAGGATCAGTGTTCCACAGAGTGATTCCTGAGTTCATGTGTCAGGGAGGAGATTTCACGCATCACAACGGGACGGGAGGGAAGTCCATATACGGGACCAAGTTTAAAGACGAGAACTTCAAACTGAAACACAATGGGCCAGGTATCTTATCCATGGCAAATTCAGGGGCGAACACGAACGGTTCTCAGTTCTTCATCTGCACAGTTAAAACTGAATGGTGAAGGAGGGCATGGAGGTAGTCTTCAAGATGGAATCCTTTGGTTGTCATGACGGTGGTGTGGTAAAGAAAATCGCCATCACGGACTGTGGGGAGATCAagtaaaacacacagacagacaggttggagAAGGTCACTATGGACAACAACTCTTGGAAACGTCCAATTTTGTAAACGTTTTTTAACTCTTCTGTTTTCCTCACCCAATTAAAAAATGAAAACCACAAATACACCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTCTGTCTTTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTTTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTATTGTTAGCTGTCTCTCATCCATGTAGTCTATTGTCAGCTGTCTCTCATACATGTAGTCTATTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACATGTAGTCTCTTGTCAGCTGTCTCTCATACAGGTAGTATCTTGTCAGCTGTCTCTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTTTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGTAGTCTCTTGTCAGCTGTCTGTCATACATGT

Function

NR:

description
peptidyl-prolyl cis-trans isomerase A-like

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613479.2 False 1583 mRNA 0.43 6 81168802 81174060
XM_036986800.1 True 1555 mRNA 0.43 6 81168802 81174063

Neighbor

gene id symbol gene type direction distance location
LOC110530390 LOC106577181 coding downstream 177088 80975992 ~ 80991714 (-)
nphp1 LOC106577164 coding downstream 202159 80940215 ~ 80966643 (-)
LOC118965579 LOC106577163 coding downstream 246445 80919948 ~ 80922357 (-)
LOC110530369 LOC106577163 coding downstream 263023 80903337 ~ 80905779 (-)
slc8a1b LOC106577160 coding downstream 521662 80409477 ~ 80647140 (-)
LOC110532756 LOC106577174 coding upstream 1782 81175845 ~ 81449471 (-)
LOC118965609 NA coding upstream 291487 81465550 ~ 81532357 (-)
rps24 LOC106577218 coding upstream 364288 81538351 ~ 81542584 (-)
qrfpra LOC106577227 coding upstream 371162 81545225 ~ 81557378 (-)
LOC110530475 eif4ebp2 coding upstream 433415 81607478 ~ 81629726 (-)
G91953 LOC106577168 non-coding downstream 89850 81071777 ~ 81078952 (-)
G91952 NA non-coding downstream 111554 81056865 ~ 81057248 (-)
G91951 NA non-coding downstream 112383 81056105 ~ 81056419 (-)
G91935 NA non-coding downstream 113046 81049906 ~ 81055756 (-)
G91938 LOC106577167 non-coding downstream 123005 81044816 ~ 81045797 (-)
G92044 NA non-coding upstream 109034 81283097 ~ 81283317 (-)
G92046 NA non-coding upstream 112429 81286492 ~ 81287073 (-)
G92047 NA non-coding upstream 113711 81287774 ~ 81288015 (-)
G92050 NA non-coding upstream 120794 81294857 ~ 81295117 (-)
G92055 NA non-coding upstream 133702 81307765 ~ 81307983 (-)
G91947 NA other downstream 132664 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 137444 81030832 ~ 81031358 (-)
G91941 NA other downstream 140190 81027908 ~ 81028612 (-)
G90382 NA other downstream 1026645 80141559 ~ 80142157 (-)
G92566 NA other upstream 986344 82160407 ~ 82161743 (-)
LOC110532782 LOC106577197 other upstream 1119750 82291777 ~ 82301867 (-)
LOC100301648 LOC106577193 other upstream 1775551 82949609 ~ 83267163 (-)

Expression


Co-expression Network