qrfpra (LOC106577227)


Basic Information

Item Value
gene id qrfpra
gene name LOC106577227
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81545225 ~ 81557378 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986856.1
ATTTCAATGCAGCTATGGGATACATGGGGGGTTAAATGTTCTCTTGTCAACGTCCTATATATAGTCTAATGATTATTGAGTGATGACGCATGCCAGCGTGCGATGCAGCGGTTGAGTAGTAGCCTGGGAGAGCTAGCATGGCACAACTGGAGCCTCCACACGGAGAGAGGAATAGGCTACTCACGCATTTTCGCACACGTCTCGGGTGGTGCACAGGACACCGCAGGGGTTTTATCACGACTTATCGCTTCAATAAGTCTCTAATAAGGACCCCGCTCtgcctaaataaaggtgaaataaattagcCAGACAGCAAATTAAATAATAGTAATCCGTCACTTACTATGGGGAATACGAAAATAACTCCAGAGGCCCTGCAAGAGCTACTTTACCGTTATAATTTAACGCGTCGGGAGTTTATTGAAATCTACAAAATCCAACCGCTGGTTTATACGCCTGAGCTTCCACCTGGAGCCAAGACAGCGTTCGTGATTGTGTACGCGGTTATTTTCTTGCTGGCACTACTTGGAAATAGTTTGGTTGTTTACATCGTGGTGAGAAAGCGGGGAATCCAAACTGCCACGAACATCTTCATTTGTTCTCTAGCAGTGAGCGACCTCCTGATTTCGTTCTTCTGCATCCCGTTCACTTTACTGCAGAACATCTCATCCGAGTGGCTAGGAGGTGTTCTGGTGTGCAAGACCATTCCCTTTGTCCAGACGACAGCAGTGGTGACAGGTATACTCACCATGGCGTGCATCGCTCTGGAGAGGTACCAAGGCATCGTCCATCCACTCAGCATGAAGAGACAGTACACACCACAGAGAGCCTACAGGATGCTGGGAGTTGTTTGGCTTGCATCCATGATTGTTGGATCTCCCATGTTGTTGGTGCAACAGTTAGAGgtgaagTATGACTTCCTATACGACCTACACCACGTGTGCTGCCAGGAGCGTTGGCGCTCGGCCTCACACAGACAGCTGTATGCCACCTTCATCCTGGTAGTTCTGTTCCTCCTGCCCCTGGCGGCCATGTTGATCCTCTACACACGGATAGGGATCGAACTGTGGATCCGCAAGAGGGTGGGCGACTCCTTTGTACTTAACACCATGAACCAGGGAGAGGTGGGAAAGATCTCCAGaaggaagaggagagccaTCAAGATGATGATTACCATTGTGGTGCTATTCACTGTGTGCTGGGCCCCATTCCACACCGTCCACATGCTCTCTGACTACAATTACCTGGACGAGCAGTTCAACGACATCACGGTGAACATGATCATGGCCATCGCCCAGGCCATCGGTTTCTCCAACTCCTTCAACAACCCTATCGTCTACGCCTTCATGAATGAGAACTTCCAGAAGAAATGTGTGTCCACCTTCTCCCAGTGCTGCCGACGGCCAAACCAGAGGGTTGGAGCTCTAGACGTCACCAGTAGATCCAAACTACATGTCCGTTTTACCCGACCGAGGGACAGACAAGAGGCGGCCATCTTGGAAGACATGTCCATCGTACAGGCCACCAGGACACAGATTAGTGGGATTGAGAATGGTGCCTTAAAGCTAAATACAGCTCCATCCTATGCAGAGGAGGAGATCTTGTTTGTGACCTGTGAGCCACAGACATGAGTGGAAGTCCGATGTAGATATGCCTATATTAGATTTGGGACTTCTATTCCCTAATGTGGTCCTgcttggctcagttggtagagcttgccccgccagggttgtgggttcgattcccggggccACCCATACGTAGAATGTATgtatgcatgactgtaagtcactttagatggaagcgtctgctaaatggcatctATTATCAACAGTGAGGTTACAATTGAATCAAGTGATTGATGATCCTAAATAAAAGGACCAGTCATTCACACCTTACTTTTAAAGGACACCTAAAATCAGTGTGTAGGTTTCTTTTCTGGATTAGATTTGTATCTGAAAAATAATGGATATGACCACTCTACTCATGTGTGACCTTAGACATGAGATTCTGAACTCTGGAGAGAGCATATATGGCATCAATCATCCATATTGTATTTATCTACCTTGTTTTCCTCCACTTAGGGCCTGTCTGGTTTTATAGTGCTGCCTTTGAAAACTGACTATAGGTAGGGTATTGGTATCCTCCAGAGTTATGTATTATTTGTGAAGTTTGTGCGTACATTGTTGTGACATTATATAAAACTGTGCTGTGAAGTATTTCTCCATTTTCTTTGACAACAGATGAAAGCGTTGGAATGTGTCATGCAGGGGAGGTTAGTGAAATCACTGAAATcctaaacaaagagttgcagtttgCTTTAGAATGGGttaccagtaataaactggtcctgaacatctctaaaactaagagcattgtatttggtcaaatcattccctaagttctaggcctcggctgaatctggtaatgaatggtgtggctgttgaacaggTTGGCAGATGTAGATAGGCCTGACTGCATGGCTTCTTGTTTTCATAAGAGACAATGTgatggaaattccaaattgtttgcttagtcaacttacacacagcactgacatacacacttaccccaccagacatgccaccaggggtcttttcacagtccccaggtacAGAAGAAATGAAAGAAAACAGACTGCCTCCCAAGTAAATCACCCATGTCCACACATGTCTGTGCCtctacccagtcatgtgaaagccatagtttagggcctaatgattttttttgttgaaaattgactgatttccttctatgaactgtatctcagtaaaatctttgaaattgttgcgtttatatttttgttcagtatatgtaaattgtaaagtattttgtaatgtattttcgttatgtgtcggaacccagtaagactagctgtcgccattgatGTTTGCTAATGGGACcttaa

Function

NR:

description
pyroglutamylated RFamide peptide receptor-like

GO: NA

KEGG:

id description
K08378 QRFPR, GPR103; pyroglutamylated RFamide peptide receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986856.1 True 2908 mRNA 0.45 6 81545225 81557378

Neighbor

gene id symbol gene type direction distance location
rps24 LOC106577218 coding downstream 2641 81538351 ~ 81542584 (-)
LOC118965609 NA coding downstream 12868 81465550 ~ 81532357 (-)
LOC110532756 LOC106577174 coding downstream 95754 81175845 ~ 81449471 (-)
ppifa LOC106577170 coding downstream 371162 81168802 ~ 81174063 (-)
LOC110530390 LOC106577181 coding downstream 553511 80975992 ~ 80991714 (-)
LOC110530475 eif4ebp2 coding upstream 50100 81607478 ~ 81629726 (-)
LOC110530466 LOC106577213 coding upstream 91034 81648412 ~ 81725766 (-)
LOC110530522 LOC106577205 coding upstream 306446 81863824 ~ 81905659 (-)
LOC110530583 LOC106577201 coding upstream 592749 82150127 ~ 82156558 (-)
LOC110532767 LOC106577224 coding upstream 625515 82182893 ~ 82187206 (-)
G92134 NA non-coding downstream 40174 81504560 ~ 81505051 (-)
G92097 NA non-coding downstream 90193 81404393 ~ 81455032 (-)
G92099 NA non-coding downstream 137243 81407286 ~ 81407982 (-)
G92089 NA non-coding downstream 150382 81371301 ~ 81394843 (-)
G92193 NA non-coding upstream 27889 81585267 ~ 81587688 (-)
G92233 NA non-coding upstream 119899 81677277 ~ 81679005 (-)
G92176 NA non-coding upstream 221181 81778559 ~ 81784757 (-)
G92269 NA non-coding upstream 222045 81779423 ~ 81784353 (-)
G92277 NA non-coding upstream 242021 81799399 ~ 81799636 (-)
G91947 NA other downstream 509087 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 513867 81030832 ~ 81031358 (-)
G91941 NA other downstream 516613 81027908 ~ 81028612 (-)
nphp1 LOC106577164 other downstream 603551 80940215 ~ 80966643 (-)
G92566 NA other upstream 603029 82160407 ~ 82161743 (-)
LOC110532782 LOC106577197 other upstream 736435 82291777 ~ 82301867 (-)
LOC100301648 LOC106577193 other upstream 1392236 82949609 ~ 83267163 (-)
G94201 NA other upstream 1926678 83484056 ~ 83485937 (-)

Expression


Co-expression Network