LOC110530475 (eif4ebp2)


Basic Information

Item Value
gene id LOC110530475
gene name eif4ebp2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81607478 ~ 81629726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613577.2
CCGTTGAAGGCGAATTGGTTCTCTGGTTTCCCGTCTGGTACCTTGTACCTCCTGAACCAGTCCACCGTGGCCTCCAAGTAACCTGGCTTCAGCCTCTGGATGTCACTGATGTCTGAGGTACACAGGATaaggagacagCTCCACCAGGCGACAGCGGGGCTACTCTTCCACGACGTCATATCCGGTCTCCTTGTGTTGTTGTTCTTCCTGCCTGGCGGAGGGAGTGGGGCTGTGCTGACGGCTGGGAGGACGAGAGGAGCCACAAGAAAGACTTGGGAAGagataagagagaaagagaaaaggccgTGGGTTACACCGTCCGTCGGGTTAGGCATCAACCACCTACAGATTACAACACCGTCTGACCATTCACTAAACCGGGGGTGAAATGTCGTCGTCTACCAGTCGTCAGTTTAGCGAGAGCAGGGTCATTCCGACCAGGACGGTGTTGATCAACGATACAACGCAGCTACCTCATGACTATTGCACCACCCCAGGAGGCACTTTATTTTCGACCACTCCGGGAGGGACCCGGATCATCTACGACCGTAAGTTCCTGTTGGACAGGCGTAACTCCCCCATCGCCCAGACCCCCCCGGCTCACCTGCCCATCATCCCCGGGGTGACCAGCCTCAAAGTCCTCACCGAGAACGGGAGGAACGAGGTCAACAACCGCATCAAACCCAACAACAGTCATGGCAAGACAGCCACCGGTGAGGACGCTCAGTTCGAGATGGACATCTAACCACCCCTGAGGAACCTCAACGGAACAACAGAAGAAGGAACTAACCTTGTACCTGTGCTGTGTACCTGTGCACCAGTGGCTTGGCTTGTAGAAACCAATTTTTGTGAGCCCTCATGTCAATCATGGCAGCCATCTTCTTTAGCTCTCTGTCTCGCCGTCGCTGGGTGTGATGTATGTAAACCATGCGGATAAACTATACCATATAATACGGTGGCTCTGTTTCAATGTCCATGCTAGGATACCACTTACAATGAAGCAATGTATTTGACATGTTTTCCCCTAAGTGGTATAGTAGTGGGATATTGGAATGCAGTCTTCATGTACTGTAGCCAACTCTTCAATAGTTGTCAAGCCATACACAGAGGCATTGGCTACAGTACAAACCAACTGGGCTACCAGGCTATGGCCAACCCTGAGACCTAATGGGAGACTGCTGGTCTATTTGAACAGGTCTCAGGGTTACAACTGGCATATTTGTATGTACTTCAGCCACACAGCAAGAGAAAGGGTCTGAAACCAAGGTAACCAGAGATATACTTACCCATTAACTAAATGTAGACGCCCAAGTCAATGCAGTAATCTAAGATGTCCATTCTGTATGTCTGTACTACCAGAGCACACTGTAAACACAGCCTTCTTTACCACTTCAGACTTTTTATAATGGGGCCCAGGAAACTGTGCAACATGTGCTACTtgtaatactttgtagagcaAAGTACCGGCCTTAGAATCTTCAGTCAGAAGGATTGATATAAACAAATAGTTTGGTTTAAATGACTGAATATGCTCCAAGGTCTCATAGCTGCCTGTTTTGTAGTCCGTTAGGTTACCAACAATTAAATTAATATGGACGATGTGACAGATTAGTTTTTTCTTCAGATTAGCTGAGAATTTCATCGTCATTCCAAGCCTTGAATTATCCATCACCAATACAAGTCTGActttatgttgtgttttggttCTTTCTGGTAAAGGATTTTATGAAGATTGGGCTTTTGGTTTGTGGTGATGATTTGATAGATTTGCAAATGGAAGGAGCAACTTAATTGATACATTACTTACAAGATTACAAGACAATAGTTAGGTTTAAACAGTCTGATATTTGCTGCATTTGAATGAACTACGTAAACTGTTGAAGAACACAGATTTATTAGAAAATGAGACAGGAAAAAGTTTAAAAACGTGAATCGTTTCCAACAATTTTTCTATGCATTTTATTACATACATTACTTCTATCTTGACATTGAACTTTTTTCAATGTCAAATACCAAATGGACATGAAAGGAAGAGCTGAGACCATTTTTTCATCAGACATTGAAACTGTATTACAGACATCTCTCGTTTAGGTAATAGACTACACTTCCACCGTCTTTCTTACCTtaatctcttcttcttctttcagtctactGTTTTAAGTGTCTCTACCCCATGCCTTACACATTACATACCAAGATAAAAGGTTGCTACTAAAATGGAGTTCCTTGTCTACTGATTCAAATGACCCTCAACCAGAAAATAGTTATATTTTAAACAGACTTTTATGTTTGTATTTAGCacttgaaaataaatatttttttaaatacattttttaaaaccgtTTTTTTTTAGTTATTCAGATCATGGCCATTATTGTTTTGGATGATCATACTGTTACCATAACTAAAACTGTCAGCAATTAAACCACGTTTTCATTCCATCTCTAGGTCCTCTCTTAttcagattatatatttttaaaaatgattATATATTAAATGCAATCATTGGATTTGATTGAAGGAGAGAAACTGTTATTTGGCTTTCTGAGAAATTATAAAATCCCAGTCTATTAATGTGGAAAATGTTTATGTGTTAAACATACAGAGCAATTGTATCCATTTTGAATTGCACATGTTTCTGTTGGATTAGGATTGTAACTCTTTGTTTTGAAGTAGGCCTGCAGCAATTGTTTTATGGGAAACCAGCTTGAGACCAGTTTGGTTCTACACATGGAGGGCTTTTTACATTGTATTTTTTTCGTAAAAAAGATTTGAAACAAGAAACCCATCTTCTGTTCCGATTTGAAATAACTTTATTTTcagagaaatgccaatgccattGGACACTGTTACAGCAAGATCAATAAAGTTCCTTGAAGATTA
>TU101510
GGCGGAGGGAGTGGGGCTGTGCTGACGGCTGGGAGGACGAGAGGAGCCACAAGAAAGACTTGGGAAGagataagagagaaagagaaaaggccgTGGGTTACACCGTCCGTCGGGTTAGGCATCAACCACCTACAGATTACAACACCGTCTGACCATTCACTAAACCGGGGGTGAAATGTCGTCGTCTACCAGTCGTCAGTTTAGCGAGAGCAGGGTCATTCCGACCAGGACGGTGTTGATCAACGATACAACGCAGCTACCTCATGACTATTGCACCACCCCAGGAGGCACTTTATTTTCGACCACTCCGGGAGGGACCCGGATCATCTACGACCGTAAGTTCCTGTTGGACAGGCGTAACTCCCCCATCGCCCAGACCCCCCCGGCTCACCTGCCCATCATCCCCGGGGTGACCAGCCTCAAAGTCCTCACCGAGAACGGGAGGAACGAGGTCAACAACCGCATCAAACCCAACAACAGTCATGGCAAGACAGCCACCGGTGAGGACGCTCAGTTCGAGATGGACATCTAACCACCCCTGAGGAACCTCAACGGAACAACAGAAGAAGGAACTAACCTTGTACCTGTGCTGTGTACCTGTGCACCAGTGGCTTGGCTTGTAGAAACCAATTTTTGTGAGCCCTCATGTCAATCATGGCAGCCATCTTCTTTAGCTCTCTGTCTCGCCGTCGCTGGGTGTGATGTATGTAAACCATGCGGATAAACTATACCATATAATACGGTGGCTCTGTTTCAATGTCCATGCTAGGATACCACTTACAATGAAGCAATGTATTTGACATGTTTTCCCCTAAGTGGTATAGTAGTGGGATATTGGAATGCAGTCTTCATGTACTGTAGCCAACTCTTCAATAGTTGTCAAGCCATACACAGAGGCATTGGCTACAGTACAAACCAACTGGGCTACCAGGCTATGGCCAACCCTGAGACCTAATGGGAGACTGCTGGTCTATTTGAACAGGTCTCAGGGTTACAACTGGCATATTTGTATGTACTTCAGCCACACAGCAAGAGAAAGGGTCTGAAACCAAGGTAACCAGAGATATACTTACCCATTAACTAAATGTAGACGCCCAAGTCAATGCAGTAATCTAAGATGTCCATTCTGTATGTCTGTACTACCAGAGCACACTGTAAACACAGCCTTCTTTACCACTTCAGACTTTTTATAATGGGGCCCAGGAAACTGTGCAACATGTGCTACTtgtaatactttgtagagcaAAGTACCGGCCTTAGAATCTTCAGTCAGAAGGATTGATATAAACAAATAGTTTGGTTTAAATGACTGAATATGCTCCAAGGTCTCATAGCTGCCTGTTTTGTAGTCCGTTAGGTTACCAACAATTAAATTAATATGGACGATGTGACAGATTAGTTTTTTCTTCAGATTAGCTGAGAATTTCATCGTCATTCCAAGCCTTGAATTATCCATCACCAATACAAGTCTGActttatgttgtgttttggttCTTTCTGGTAAAGGATTTTATGAAGATTGGGCTTTTGGTTTGTGGTGATGATTTGATAGATTTGCAAATGGAAGGAGCAACTTAATTGATACATTACTTACAAGATTACAAGACAATAGTTAGGTTTAAACAGTCTGATATTTGCTGCATTTGAATGAACTACGTAAACTGTTGAAGAACACAGATTTATTAGAAAATGAGACAGGAAAAAGTTTAAAAACGTGAATCGTTTCCAACAATTTTTCTATGCATTTTATTACATACATTACTTCTATCTTGACATTGAACTTTTTTCAATGTCAAATACCAAATGGACATGAAAGGAAGAGCTGAGACCATTTTTTCATCAGACATTGAAACTGTATTACAGACATCTCTCGTTTAGGTAATAGACTACACTTCCACCGTCTTTCTTACCTtaatctcttcttcttctttcagtctactGTTTTAAGTGTCTCTACCCCATGCCTTACACATTACATACCAAGATAAAAGGTTGCTACTAAAATGGAGTTCCTTGTCTACTGATTCAAATGACCCTCAACCAGAAAATAGTTATATTTTAAACAGACTTTTATGTTTGTATTTAGCacttgaaaataaatatttttttaaatacattttttaaaaccgtTTTTTTTTAGTTATTCAGATCATGGCCATTATTGTTTTGGATGATCATACTGTTACCATAACTAAAACTGTCAGCAATTAAACCACGTTTTCATTCCATCTCTAGGTCCTCTCTTAttcagattatatatttttaaaaatgattATATATTAAATGCAATCATTGGATTTGATTGAAGGAGAGAAACTGTTATTTGGCTTTCTGAGAAATTATAAAATCCCAGTCTATTAATGTGGAAAATGTTTATGTGTTAAACATACAGAGCAATTGTATCCATTTTGAATTGCACATGTTTCTGTTGGATTAGGATTGTAACTCTTTGTTTTGAAGTAGGCCTGCAGCAATTGTTTTATGGGAAACCAGCTTGAGACCAGTTTGGTTCTACACATGGAGGGCTTTTTACATTGTATTTTTTTCGTAAAAAAGATTTGAAACAAGAAACCCATCTTCTGTTCCGATTTGAAATAACTTTATTTTcagagaaatgccaatgccattGGACACTGTTACAGCAAGATCAATAAAGTTCCTTGAAGATTA

Function

symbol description
eif4ebp2 Predicted to enable eukaryotic initiation factor 4E binding activity. Predicted to be involved in negative regulation of translational initiation. Predicted to act upstream of or within negative regulation of translation and translational initiation. Predicted to be active in cytoplasm. Is expressed in brain and head. Orthologous to human EIF4EBP2 (eukaryotic translation initiation factor 4E binding protein 2).

NR:

description
PREDICTED: eukaryotic translation initiation factor 4E-binding protein 2

GO:

id name namespace
GO:0045947 negative regulation of translational initiation biological_process
GO:0008190 eukaryotic initiation factor 4E binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613577.2 False 2883 mRNA 0.41 4 81607478 81629726
TU101510 True 2670 TUCP 0.38 3 81607478 81617324

Neighbor

gene id symbol gene type direction distance location
qrfpra LOC106577227 coding downstream 50100 81545225 ~ 81557378 (-)
rps24 LOC106577218 coding downstream 64894 81538351 ~ 81542584 (-)
LOC118965609 NA coding downstream 75121 81465550 ~ 81532357 (-)
LOC110532756 LOC106577174 coding downstream 158007 81175845 ~ 81449471 (-)
ppifa LOC106577170 coding downstream 433415 81168802 ~ 81174063 (-)
LOC110530466 LOC106577213 coding upstream 18686 81648412 ~ 81725766 (-)
LOC110530522 LOC106577205 coding upstream 234098 81863824 ~ 81905659 (-)
LOC110530583 LOC106577201 coding upstream 520401 82150127 ~ 82156558 (-)
LOC110532767 LOC106577224 coding upstream 553167 82182893 ~ 82187206 (-)
LOC110530609 LOC106577197 coding upstream 561192 82190918 ~ 82198422 (-)
G92193 NA non-coding downstream 19790 81585267 ~ 81587688 (-)
G92134 NA non-coding downstream 102427 81504560 ~ 81505051 (-)
G92097 NA non-coding downstream 152446 81404393 ~ 81455032 (-)
G92099 NA non-coding downstream 199496 81407286 ~ 81407982 (-)
G92233 NA non-coding upstream 47551 81677277 ~ 81679005 (-)
G92176 NA non-coding upstream 148833 81778559 ~ 81784757 (-)
G92269 NA non-coding upstream 149697 81779423 ~ 81784353 (-)
G92277 NA non-coding upstream 169673 81799399 ~ 81799636 (-)
G92257 NA non-coding upstream 179623 81809349 ~ 81812912 (-)
G91947 NA other downstream 571340 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 576120 81030832 ~ 81031358 (-)
G91941 NA other downstream 578866 81027908 ~ 81028612 (-)
nphp1 LOC106577164 other downstream 665804 80940215 ~ 80966643 (-)
G92566 NA other upstream 530681 82160407 ~ 82161743 (-)
LOC110532782 LOC106577197 other upstream 664087 82291777 ~ 82301867 (-)
LOC100301648 LOC106577193 other upstream 1319888 82949609 ~ 83267163 (-)
G94201 NA other upstream 1854330 83484056 ~ 83485937 (-)
G94613 NA other upstream 2171606 83801332 ~ 83802471 (-)

Expression


Co-expression Network