fih1 (LOC106577208)


Basic Information

Item Value
gene id fih1
gene name LOC106577208
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81852648 ~ 81861895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001281328.1
CTGCCGTTCTTATTATACCTCAGTGGTCAATGGTTATTTACACATTTGGCTGGTGCTAGCAAACACTGAGCTTTGGAAGCTTGTCGGCTCGGTGTTTAATGTATTGCATTGGGAAAGAAACAGACCATTTATGCATGGCAATGTTGTGAGCAAACACGTAGCATAAGTCCTAAAGAAGAGGTGTCAGTTTCTCGAGTCAAGAGAACATCTTTTGACAGCGAGCGAGGGGCAATCTTGGCTTGGGTTCGGTACACGGGCATGGCAGCGGCAACAGTGGTCGAGAATGATCCGACGGCGAACGAAGGCGGTGCCGCATCATTCTCGGAGCCGGAGGTCCACAGCCCTATCTGGAACGACTCTCAACTTCGAAAGTATCCTTTCCAGACCAGACCGATACCCAGACTCTCTCACACGGATCCTAGAGCTGAGATGCTCATAAACAACGAGcaACCAGTGGTTTTAACAGACACCAATCTAGTGTATCCGGCTCTCCAGTGGGACATCCCGTACCTGCAGGAGAACATTGGAAACGGGGACTTTTCTGTGTACATCGCGGAAAACCACAAATTCCTCTACTATGACGAGAAGAAAATGGCCAACTTTGAGAACTTTGTACCCAAGTCTCGACGGATAGACATGAAATTCTCGGATTTTGTGGAGAAAATGCGTAAAAcgcaggaagagggaggagatgagagGGTGTACCTGCAGCAGACACTGAATGACACAGTGGGCAGGAAGATTGTGGTGGACTTCCTGGGTTTCAACTGGAACTGGATCACCAAGCAGCAGAGCAAGAGAAACTGGGGCCAGCTCACCTCCAACCTGCTGCTCATAGGCATGGAGGGCAACGTGACGCCAGCCCATTACGATGAGCAGCAGAACTTCTTTGCACAAATCAAAGGTTACaagaggtgcatcctgttccctcCCGACCAGTTTGAGTGTCTCTACCCCTTCCCTGTTCACCACCCCTGTGACAGACAGAGCCAGGTTGACTTTGAGAACCCTGACTATGAGAGGTTTCCCAACTTCAAGAATGTGTCGGGCTATGAGACTGTGGTGGGCCCTGGAGATGTTCTCTACATCCCCATGTACTGGTGGCACCACATTGAGTCCCTGTTGAGTGGTGGAGTGACCATCACTGTCAACTTCTGGTACAAGGGTGCGCCCACGCCCAAGAGGATCGAGTACCCACTGAGAGCTCATCAGAAGGTGGCCATCATGAGAAACATAGAGAAGATGCTGGGGGAGGCACTGGGAGACCCACACGAGGTTGGCCCTTTATTGAACATGATGATTAAAGGCCGCTATGACCAGGGATTCAGCTAGAGCTACTGCCTcagaactgtctgtgtgtgtatttgtgtgagtgagtgtgcccAGGCCTGATTGTGTGTTTGTAGGTGAGCATGTGTGTGCAGACACGTGTTTGTGCATTCGGACTGTTAAGCTAGCAGTGACTTGGCCAATCAGCCATTTTGACTGTTTTGATTGTCTGGGAGCCATAATCATCACAACTTCAGCTACCAGTGGGAAGACAATAGTGGACATCGGACCAGCCATGGAGACCCACATGCAGTGTGCTGTCAGAGAGGGATGAACTGTGTAAACTACACAATGTAGAGTTGTGGTATTTTAGAGGGAGTGGAGTGATAGGCAACCGCTGTAGATGTCAAAGAATAAACCCCCAAACACCCTCAAAGTGAAAGTTGCCCATAATTAATCATTGATGCAGGGTCAGATATTGGACATTTTATCATCACACCCAATAGGATTGGgaaaatctgatcctagatctgtagttGGGGGCAATTTCTACCTTGAACactaaacaggtgtgtgtgttgggtggttgTTAGTCATAACCAACAAGATACTCCCTTCGTCTATTTAACCGTTCCCCTGTCATTACAGTTTGTAACCATAGCAACACACCTGCAGCTTGAATATTAAATAGGGAATAGCTGTGTAGTAACTAAAGTAGGCCTACTTATTTTGTGACAAACTTCTCAATGAATTTGCGACACATGCACCCCGAAAGAGATGAGTCATATTCTTGTTCTGTTGACTAGGTCAGTAAGCTGATTTTTGTTTCTGTATAATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K18055 HIF1AN; hypoxia-inducible factor 1-alpha inhibitor (HIF hydroxylase)

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001281328.1 True 2107 mRNA 0.48 8 81852648 81861895

Neighbor

gene id symbol gene type direction distance location
LOC110530514 LOC106577205 coding upstream 17157 81824592 ~ 81884237 (+)
scdb LOC106577210 coding upstream 39734 81803814 ~ 81812914 (+)
LOC110532764 NA coding upstream 61677 81787863 ~ 81790971 (+)
LOC110530482 LOC106577211 coding upstream 75647 81775161 ~ 81777001 (+)
tysnd1 tysnd1 coding upstream 207230 81641973 ~ 81645418 (+)
LOC110530526 LOC106577204 coding downstream 45021 81906132 ~ 81907399 (+)
LOC110530536 LOC106577203 coding downstream 48223 81910118 ~ 82005198 (+)
LOC110530572 LOC106577202 coding downstream 266724 82128619 ~ 82163498 (+)
LOC110530588 LOC106577200 coding downstream 310181 82172076 ~ 82179077 (+)
LOC110530624 cssa18h10orf11 coding downstream 594404 82456299 ~ 82916411 (+)
G91738 NA non-coding upstream 38484 81813843 ~ 81814164 (+)
G91731 NA non-coding upstream 50864 81801551 ~ 81801784 (+)
G91721 NA non-coding upstream 74471 81777781 ~ 81778177 (+)
G91710 NA non-coding upstream 114944 81737502 ~ 81737704 (+)
G91709 NA non-coding upstream 116117 81736323 ~ 81736531 (+)
G91773 LOC106577205 non-coding downstream 5560 81867455 ~ 81874732 (+)
G91826 NA non-coding downstream 87467 81949362 ~ 81949566 (+)
G91829 NA non-coding downstream 90511 81952406 ~ 81952619 (+)
G91832 NA non-coding downstream 93459 81955354 ~ 81955569 (+)
G91837 NA non-coding downstream 102428 81964323 ~ 81964678 (+)
G91541 LOC106591086 other upstream 311248 81538331 ~ 81541400 (+)
G91064 NA other upstream 1086493 80765114 ~ 80766155 (+)
acoxl acoxl other upstream 2087289 79720751 ~ 79765359 (+)
G89667 NA other upstream 2302997 79549017 ~ 79549651 (+)
G87159 NA other upstream 4282178 77570015 ~ 77570470 (+)
G91779 NA other downstream 15644 81877539 ~ 81879178 (+)
G92511 NA other downstream 280229 82142124 ~ 82142587 (+)
G92575 trmt13 other downstream 319051 82180946 ~ 82181796 (+)

Expression


Co-expression Network