LOC110530583 (LOC106577201)


Basic Information

Item Value
gene id LOC110530583
gene name LOC106577201
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82150127 ~ 82156558 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613778.2
ATGTTATTGAATTCTAGAAAGTTTGAAATTGTGAAATATTCTTCAGTTGCTCAAGCAACTCCTTTCTGTCAATGTGTCACCAATTAATGTAGATGAAGGCATTCTTCCACAAACAAAAGAGGTTTAAGTGGTTTTGCACTGTCAAAGATTGATCAATTTCACATGGTTCACCTAACAATGAGACAATGGGACCAACAGACAACCTTTAGACTTGGTGAAAGATTATGACATATTTTTGGGGATTCAACGTTGGTGAATGAGAGAGGGATTGCTGTTGATTTTACGAGTCTGTGGACAAGAAGTCTGTGGACAAAAAGTCTGTGTGGACCAAGTGGAAGATGAAGATGAAGTTCGAACACCTACTCTCGGTGGTCAATGGATTTGGACGGTTCCAGATGATGATCATTATCATCAGCTTTATTGGTCGATTCACCCTGCCGTGTCACTTCCTGCTGAACAACTTCATAGCAGCCGTGCCCTCTCACCACTGTGACCTCAGCGCTCTGGATGATGGCCGCCTCTTTGGGAATCTGACCCAGGAGCAGAGACTGACTGTCAGCATTCCAGTACAGGAAGATGGGACTCCAAGCTTCTGTAAGATGTTCCCAGAGCCCCAGTTCCAGCTCCTTTCCAACTCCAATGACCGTGACCTAGTTACAGTCCCCTGTCAGAATGGATGGGCATATGACAACAGCACCTTCAAATCCACTCTGGCTACAGAGTGGGACTTGGTGTGTGACCAGAAAGGGCTAAATAAGGCAACAACAACCATCTTCTTCATAGGAGTGATGTTCGGAGCTATGACCTTTGGAAGCCTGAGTGACAGGTTTGGTAGGAAGCCCATGCTCCTGGTGTCCTATATCTCTGGCATGCTGTTTGGTTTTGCCAGTGCTTTCTCCACTTCTTTCATCATGTTCGCTGTGCTCAGGTTCTTCACTGGGTTCGGTATCACCGGCATCGTTATCGTCTCATCAGTACTCAGTGTGGAGTGGGTGGACATTGAGCACAGAAAGCTGGTGGGAGTGATTGACAGCCTGTCCTGGAcgtttggttactgcatgattccagcCATAGCCTACTGTGTGACCGACTGGAGACAGCTGACCATAGCGGTCACCTCACCTCTTGCTCTAGCCATACTCACCTGGAGGTGGATTCCTGAATCAGCCAGGTGGCTCATAGCCAATGGGAAGTTTGAGAAAGCTAACTTTTATTTGCAACAATGTGCCCAGATGAACCAGAAGGAGGAGTTTGGATCCAAAATTACACCAGAGACTCTATCCAGTATCATtgtgacagagagaaaagacagaactCACTCCTACCTGGACTTGGTCAGGACACCAAAGATGAGGAGGCTGGCTCTACTAACAGGCATAGTGTGGTATGGTGTGGCATCAACATTTTATGGCATTAGCTTCAACATCACTGGATTTGGACTCAATATCTATCTGACCCAGTTTGTGTACGGTGCCATAGAGCTGCCAGCCAAACTATCAGCGTACTACCTTCTGGATAAGGTGGGCAGGAGAAACACAGAAGTGGGATCTTTACTAGGAGCTGGAATCTGTCTCGCTATCAACATCTTCATACCCCGAGACATGTCTGTTTTAAGGACGGTGGTGGCGGTGTTGGGGAAGGGTTGCTCGGCAACATCCTTCACAACCGTTGTGTTGTATAGCTCTGAGCTGTTCCCTACTGTGGTCAGgcaGAACGGCATGGGCTACAACTCATCCATGGGTCGTCTGGGAGTGTCTCTGGCCCCTCTGATCCTGCTGCTGGACGAGGTGTGGAGGGATCTTCCACAGGTCCTCCTCTGCTCCATAGCCCTGCTAGCTAGCCTGGTGGCCAGGATGCTGCCGGAGACACGGGGCCGCTGTCTACCAGAGACCATCCAGGACGTCGAGGACGGGCAGACAGGGAAAGGTTTGGCTGGATCCCAAGTTGTGGAAACAACAGATATCCCTCTCAAATCAAAGGACAATGATGAGGTGGAAAATGGATACTAAGATTCTTCCTGTATATATTTTTGATATGCCCAAATGTGcaccctgtggaatgcttttgacaacttgtagagtctatgcccgatgtaactcaatattaggaaggtgttctttaatgttttgtacactcagtgtgtttgTTACACATCAAAAACAACCTTCAAACCTCTCACTGATCTTATAAAAAAAGATAAACGAAATACAAGAGaacaaaagagaaagagagcctGAAGTGTGAAGCATAATTCAAGTGTTACTCGTCACATACAAATGATGATTTACACTTAATTCCAATATTACATGATCTTATTTAGAAAAGACTCCTTTTCTGTTTCATATCAATGAGGAACAAGATTATCTTTGATAATGTATCATAACTCTTTGTGCATTATTCTTCACCATAACCATTGGCAAATGCATGCAATCAATCTTTAATATTGAATATGAGCCTATTGTTGTATACACattttatacagtaccagtcaaaagtttggacacacctactcattcaacgttttttctttatttatactattttctacaatgtagaaa

Function

NR:

description
solute carrier family 22 member 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613778.2 True 2558 mRNA 0.45 10 82150127 82156558

Neighbor

gene id symbol gene type direction distance location
LOC110530522 LOC106577205 coding downstream 244468 81863824 ~ 81905659 (-)
LOC110530466 LOC106577213 coding downstream 424361 81648412 ~ 81725766 (-)
LOC110530475 eif4ebp2 coding downstream 520401 81607478 ~ 81629726 (-)
qrfpra LOC106577227 coding downstream 592749 81545225 ~ 81557378 (-)
rps24 LOC106577218 coding downstream 607543 81538351 ~ 81542584 (-)
LOC110532767 LOC106577224 coding upstream 26335 82182893 ~ 82187206 (-)
LOC110530609 LOC106577197 coding upstream 34360 82190918 ~ 82198422 (-)
LOC118966721 LOC106577224 coding upstream 53944 82210502 ~ 82218883 (-)
LOC118966722 LOC106600083 coding upstream 76022 82232580 ~ 82245632 (-)
LOC110532773 LOC106600083 coding upstream 101488 82258046 ~ 82266018 (-)
G92547 NA non-coding downstream 35882 82113993 ~ 82114245 (-)
G92533 NA non-coding downstream 57467 82092430 ~ 82092660 (-)
G92474 NA non-coding downstream 64670 82085159 ~ 82085457 (-)
G92451 NA non-coding downstream 84369 82065534 ~ 82065758 (-)
G92449 NA non-coding downstream 85259 82064615 ~ 82064868 (-)
G92566 NA non-coding upstream 3849 82160407 ~ 82161743 (-)
G92622 NA non-coding upstream 7336 82163894 ~ 82164113 (-)
G92629 LOC106577200 non-coding upstream 15458 82172016 ~ 82179214 (-)
G92636 NA non-coding upstream 22737 82179295 ~ 82180152 (-)
G92637 NA non-coding upstream 31742 82188300 ~ 82189565 (-)
LOC110532756 LOC106577174 other downstream 968664 81175845 ~ 81449471 (-)
G91947 NA other downstream 1113989 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 1118769 81030832 ~ 81031358 (-)
G91941 NA other downstream 1121515 81027908 ~ 81028612 (-)
LOC110532782 LOC106577197 other upstream 137255 82291777 ~ 82301867 (-)
LOC100301648 LOC106577193 other upstream 793056 82949609 ~ 83267163 (-)
G94201 NA other upstream 1327498 83484056 ~ 83485937 (-)
G94613 NA other upstream 1644774 83801332 ~ 83802471 (-)

Expression


Co-expression Network