LOC118966722 (LOC106600083)


Basic Information

Item Value
gene id LOC118966722
gene name LOC106600083
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82232580 ~ 82245632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989935.1
AGAGCGAATTCGGATCCGTTCCGAGATCATCGGAGAGCCTTTTCGATTTATCAAACCCATTTACCGAGGTTTTGACAAAAATGAATGAGAAAGAACTGCTCCATGGGCTGAACGACCGTTTCGCCGGATTCATAGAGAAGGTGCGTCATTTGGAGCATGAAAATGAATTGTTTGAGAGGGAAATCGAGGAAATCAAACTAAAGGCACAGTCCCCTGCGTCTCTGGCCCAGGAGCACGAGCCGGAGCTTATGGACCTGAGGAACCTAGTTCATGACATCTCCCTTCAGAAGCGTCAGATCGAGATAGAGCATCAGAACCTGGAGGAAGATTTCCTCATCTTGAGAGACAAGTATGAGCAGGAGGCACGTGACCGCTCGAACGCAGAGAACGGTATCCTTGTGCTGAAAAAGGACGCCAACGATGCATACCTTGCCAAACTTCAGTTGGACAACAAAGCGCAGTCTTTGGTGGACGAGATCCACTTCCTGAAGAACAACCATGAGGACGAGATATCAGAAATGGTGGCCCAGATCCAAGAGGCTCAAGTAACGGTCAAGGCATACAACTTTGGCAAACCTGACATCACAGAGGCTCTCCGGGACATCCGTGTGCAGTTAGAAGGTCACGCCACTTCCGACATTCAGCAGGCCGAGGAGGGCTTCCGTGTCCAGTTCGCAAAGTTAACCAAAGCGGCAGAAAGTAACAGGGAGGCGTTGAAGGCAACCCAACAGGAGATCCAGGAGAATAGAAGGCACCTGCAGGGGAAGACAATTGAACTGGACTGTGGTAAAGGAATGAGAGAGGCCCTGGAAAAACAACTACAAGAGCTGGAGGAGCGTCACTATGCAGAATTGATTCATTACCAGGACACTATCAGGCAGCTGGAGAATGAGCTGACCAATGCTAAACTAGACATGTCTGGCTACCTGAGAGAGAACCAGGACCTGCTGAATGTCAAAATGGCTTTGGATGTGGAGATTCTCTCTTACAGGAAACTCCTGGAGGGTGAGGAGTCCCATCTGTACACCATCTCTGACACCCACATCTCCATGCCCTGCATCTACCGCCAGTCCCCCGTCTACACCCTGCCTTGCCTGGCCCGGCAGGGAGGGCCCACACGCAGGTCTGAACCCCAGTACAAGTTTGTTGAGGAGATCATCTCTGAGACCACCAGAGACATGGAGATGTCCGAGATTGAGGAGAAAGGCTCCGAGGAGACGgtcgggggagagggagacaagttgAGACAGAAGCAGGGAGAAGAGAGTGACAAAGCTGAGAGGAGAAGTGGGGAACAGGTGGATGAGCATAAAGAGAAAGCTAGAGGTAAAGTGGATGTTGAAGTGGACGCCCCGGAGGAAGAGGGTGAACAGGAGGAAGAGTCTAAGAGACAGCAGATGGTCACATCAGCAGAGGTCGAGGTAAATGGAGATGGAGTTAGCCCTAGTGAGGGAGaaaatggagaggagggagatgatgaaagagaggaggaaaaggggggtgAGCCAGATGCAATCAAAAAGACAGAGGACATTGACAGAGGTGAAAATACACAAAGTGAAGTCAAATCAGCTGAGGCCAccagtgagggagagaaggaaaaacTGGACACAACAGAGAAGCTAGACAGCGAGATAAACGAGACATTAGAAAAAGATGACACCCCAAAACAAGGCAAATCCCAACTAGAGGTTCCCATGAATGGTGACATCTCAACAGAACCCAAAACGTCAGAGTCAGAGGATAGCAAAACAGGTTCAATAAAGGGTGAACCACAGGTCCCCACAGAGGACATCTCCAAAGAACCCAAAAAGGTGTCAgaggagagaaaaatagaaagcCCTTTACAAGAGAAAAAAGAGGTAGATCTGAAAGAGGAGAGTGCCCCAACAGAGCAACAACAAGATAGCCCAAAAGAAAGTCCCATCAAAGAGGGGAAAAAGGTAGATCTGACAGACCAGAGTGCCCCAACACTGGAGCAGAAACCTGATCAGAAGGAGCACAGAGAGTCAGACCAACCTCAAGAGGCAGAGAGTGCTGTGACAACACAAGAAGAGGATCTCCCTGAGCCCACAGAGAAGGACATGGAATCCCCTGATAACACTGCAGAGCTCAACACCAGTTCAACCAAGGAGACAGTGGAGCAGGTGAAGTCACCTGATGATTCTGGTGTAAAAACGACACAAGATGAGAGAACAGTAGGAGGTAAAATGCCAGACAGAATTCTCAGCACAACAAGTGAGTGTAAGGAAGACCTTGTGCAAAAGATTCCTAAAAAGGAGGTGGGTCCGACAGAGCAAAAAGTGAGCAGCAAGGATGATAGTGTAAAAATTGTTGGCAGTGAAAAGGTCACAAAAGATGTCTCAATGGGTGAGGAAAAAAGGAAAGAATCTGAGACATCCCCCAAACCCGACCCAACTGTCACCCCTAAAGAAGAAACTTCCATTAAACCAGAACCAGCAGTCACTGCAAAAGAAGAAACGTCCCCAAAACCAGAACTAGCAGTCACCACTAAAGAAGAAACTTCCCCAAAACCAGAAATAGCAGTCACCACTAAAGAAGAAACGTCCCCAAAACCAGAACTAGCAGTCACGGCTAAATTAGAAACTTCCCCAAAACCAGAACTAGCATTCACCACTAAAGAAGAAACGTCCCAAAAACCAGAACCAGGAGTCATCCCAAAGGTAGATACTTCCCCAAAACCAATCTCAACCATCACCCCTAAAGAAGAAACGTCCCCAAAACCAGAATCAGCAGTCACCCCTAAAGATGACACATCCCCTAAACTGGACCCCACTGTCACTCCTAAAGAAGAAACAACACCGCATCCAGAGCCAACTGTCACCCCTAAAGAGGAGACATCTCCTAAACCATACCCCACTGTCACCCCTAAAGAGGAAACACCCCCAAAACCATTCCTGACAGTCGCCACTAAAGAGGAGACATTCCCTAAACCAGAACTATCAGCCACCGCTAAATTAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCCCTAAAGAACAAACTTCCCCAGAGCCAGAACCAGCAGTCACCCCTAAAGAAGAAACGTCCCAAAAACCAGAACCAGGAGTCATCCCAAAAGTAGAAACTTCACCCAAACCAGAACTAGCAGTTACCCCTAAAGTAGAAACGTCCCCAAAACAAAGCTCAACCATCACCcctaaaaaagaaacgtccccaaAACCAGAACCAGCAGTCGCCCCTAAAGATGACACATTCCCTAAACCGGACCCCACTGTCACTCCTAAAGAAGAAACAACCCCGCATCCAGAGCCAACTGTCACCCCTAAAGAGGAGACATCCCCAAAACCATTCCCGACAGTCGCACCTAAAGAGGAGACATTCCCTAAACCAGAACTATCAGTCACCGCTAAATTAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCACTAAAGAACAAACTTCCCCAAAAGCAGACTCAACCATCACCTTTAAAGAAGAAATTTCCCCAAATCCAGAACCAACAATCACCCCTAAAGAAGAAAATTCCCCAAAACCAGAACTAGCAGTCACCACTAAAGAAGAAACTTCCCCAAAACCAGAAATAGCAGTCACCACTAAAGAAGAAACGTCCCCAAAACCAGAACTAGCAGTCACGGCTAAATTAGAAACTTCCCCAAAACCAGAACTAGCATTCACCACTAAAGAAGAAACGTCCCAAAAACCAGAACCAGGAGTCATCCCAAAGGTAGATACTTCCCCAAAACCAATCTCAACCATCACCCCTAAAGAAGAAACGTCCCCAAAACCAGAATCAGCAGTCACCCCTAAAGATGACACATCCCCTAAACTGGACCCCACTGTCACTCCTAAAGAAGAAACAACACCGCATCCAGAGCCAACTGTCACCCCTAAAGAGGAGACATCTCCTAAACCATACCCCACTGTCACCCCTAAAGAGGAAACACCCCCAAAACCATTCCTGACAGTCGCCACTAAAGAGGAGACATTCCCTAAACCAGAACTATCAGCCACCGCTAAATTAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCCCTAAAGAACAAACTTCCCCAGAGCCAGAACCAGCAGTCACCCCTAAAGAAGAAACGTCCCAAAAACCAGAACCAGGAGTCATCCCAAAAGTAGAAACTTCACCCAAACCAGAACTAGCAGTTACCCCTAAAGTAGAAACGTCCCCAAAACAAAGCTCAACCATCACCcctaaaaaagaaacgtccccaaAACCAGAACCAGCAGTCGCCCCTAAAGATGACACATTCCCTAAACCGGACCCCACTGTCACTCCTAAAGAAGAAACAACCCCGCATCCAGAGCCAACTGTCACCCCTAAAGAGGAGACATCCCCAAAACCATTCCCGACAGTCGCACCTAAAGAGGAGACATTCCCTAAACCAGAACTATCAGTCACCGCTAAATTAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCACTAAAGAACAAACTTCCCCAAAAGCAGACTCAACCATCACCTTTAAAGAAGAAATTTCCCCAAATCCAGAACCAACAATCACCCCTAAAGAAGAAAATTCCCCAAAACCAGAACTAGCAGTCACCCCTAAAAATATAACATTCCTTAACCCTGAGCCCAGTGTCACTCCTAAAGAAGAAACAACCTCTCAACCAGGGCCAACTGTCACTCCTAAAGAGGAGACACCCCCTAAACCGTACCCCACTATCAACCCTAAAGAAGAAACTTCCATTAAACCAGAACCAGCAGTCACCCCTAAAGAAGAAGCTTCCCCAAAATCAGATTTAACCATCACCCCTAAAGAAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCCCTAAAGTAGAAACTTCACCAAAACCCGAACTAGCAGTCACGGCTAAAGTAGAAACTTCCCCAAAACCAGTACTAGCAGTCACACCTAAAGATGAAATTTCCCCAAAACCAGAACCAGCAGTCACCCCTAAAAATGAAACATTCACTAACCCAGACCCCACTGTCACTCCTAAAGAAGAAACTTCCCCAAAACCAGAACCAGCAGTCACCCCTAAAGTAGAAACTTCCCCAAAACCAGAACCAGCAGTCACCGCTAAAGTAGAAACTTCTCCAAAGCCAGCAGTCACCACTAATGTAGAAATTTCCCTAAAACCAGAGCACACTGTCACTCCTAAAGAAGAAACAACCCCGCAACCAGAGCCAACTGTCACTCCTAAAGAGGAGACTTCCCCTAAACCGTACCCCACTGTATCCACTAAAGAAGAAACATCCCCGCAACAGGAACCAACAGTCACCCCTAAAGAGGAGACATCCCCTAAACCATATCCCACTGTCACCACTAAAGAAGAAACATCCCCTAAACCGTTCCCCACTATTGCCCCTAAAGAGGAGACATCCCCTAAACCAGAACGAGCAGTCACCACTAAAGTAGAAACTTCCCCAAAACCAGAACTAGCAGTCACAACCAGAGAAGAAACTTCCCCAAAGCCAGAACCAGCAGTCACCGCTAAAGAAGAAACTTCCACAAAATCATCTCTAGCAGTCACCATTAAAGAACAAACTTCCCCAAAAGCAGACTCAACCATCACCTTTAAAGAAGAAacatccccaaatccagaaccaaccatcacccctaaaaaagaaacgtcccaaATACCAGAACCAGCAGTCGCCCCTAAAGATGACACATTCCCTAAACCGGACCCCACTGTCAACCCTAAAGAAGAAACTTCCATTAAACCAGAACCAGCAGTCACCCCTAAAGAAGAAGCTTCCCCAAAACCAGATTCAACCATCACCCCTAAAGAAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCCCTAAAGTAGAAACTTCCCCAAAACCAGAACCTGCAGTCACAGCTAAAGTAGAAACTTCCCCAAAACCAGTACTAGCAGTCACACCTAAAGATGAAATTTCCCCAAAACCAGAACTAGCAGTCACCCCTAAAGAAGAATCTTCCCCAAAACCAGAAACAACTGTCACTCCTAAAGAGGAGACATCCCCTAAACCGTACCCCACTGTCACCGCTAAAGAAGAAACATCCCCGCAACAGGAACCAACAGTCACCCCTAAAGAGGAGACATCCCCTAAACCATATCCCACTGTCACCACTAAAGAAGAAACATCCCCTAAACCGTTCCACACTATTGCCCCTAAAGAGGAGACATCCCCTAAACCGCATCCCACTGTCACCACTAAAGAAGAAACATCCCCAAAACCGTTCCCCACTGTTGCCCCTAAAGAGGAGACATCTCCTAAACCAGAACGAGCAGTCACCACTAAAGTAGAAACTTCCCCAAAACCAGAACTAGCAGTCACAACCAGAGAAGAAACTTCCCCAAAGCCAGAACCAGCAGTCACCGCTAAAGAAGAAACTTCCACAAAATCATCTCTAGCAGTCACCGCTAAAGTAGAAACTTCCCCAAAAACAGTAATAGCAGTCACACATATAGAAGAAAGTTCCCCAAAACTAGAACCAGCAGTCACCCCTAAAGAAGAAACTTCCCCAAAACCAGAACCAGCAGTCACCCCTAAAGTAGAAACTTTCCCAAAACCAGACCCAACCATCACCCCTAAAGAGGAAATATCCCCTAAACCAGACTCAACTCTCACCCCAGAATTAACGACCACCCCTAAACCATACTCAACCCTCACCCCAGAATCAACAACCACCCCTAAACCAGACTCAACCCTCACCCCAGAAACAACGACCACCCCTACAGAAGAGAGTGAAATGATGGGCAGTGGTGACAAAGCTAAGACAATCACACCACCAGAGGAACAGATGCCTGCAGTTGCAGAGAGCAAGGACTCACACAGGGGGGCACCAGAAAGCAACACAATTCAAGAGAAACCAGAGGAAAGTCCAAGGGCCACTGCCGAAGCTACCGGGGATGCCTTAGACAGTCCGTCAGGCTCCCGCGCCTCAGCCGATTCGACTGtttcccatgcctcagccggctcgactTGGTCCCGCGCTTCAGCTGGCTCTTCAGGTTCCCGTGCCTCATCAGAGGTGACCGGCCTGCTCCTGGTACTCGGGACCGTTCCTCTGGTCGGCGTCCTGCTTCTTGAGCCCCGCTtcagggaggggACAGTATTAGTTATCTTCCTCATGTCCAGATGCTAa

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989935.1 True 7178 mRNA 0.48 5 82232580 82245632

Neighbor

gene id symbol gene type direction distance location
LOC118966721 LOC106577224 coding downstream 13697 82210502 ~ 82218883 (-)
LOC110530609 LOC106577197 coding downstream 34158 82190918 ~ 82198422 (-)
LOC110532767 LOC106577224 coding downstream 45374 82182893 ~ 82187206 (-)
LOC110530583 LOC106577201 coding downstream 76022 82150127 ~ 82156558 (-)
LOC110530522 LOC106577205 coding downstream 326921 81863824 ~ 81905659 (-)
LOC110532773 LOC106600083 coding upstream 12414 82258046 ~ 82266018 (-)
LOC110530601 LOC106577224 coding upstream 29437 82275069 ~ 82288547 (-)
LOC110532782 LOC106577197 coding upstream 46160 82291777 ~ 82301867 (-)
LOC110530617 zn503 coding upstream 193510 82439142 ~ 82442325 (-)
LOC100301648 LOC106577193 coding upstream 703977 82949609 ~ 83267163 (-)
G92631 NA non-coding downstream 8821 82200416 ~ 82223759 (-)
G92630 NA non-coding downstream 29308 82202855 ~ 82203272 (-)
G92637 NA non-coding downstream 43015 82188300 ~ 82189565 (-)
G92636 NA non-coding downstream 52428 82179295 ~ 82180152 (-)
G92629 LOC106577200 non-coding downstream 53366 82172016 ~ 82179214 (-)
G92633 NA non-coding upstream 1218 82246850 ~ 82291520 (-)
G92632 NA non-coding upstream 25023 82270655 ~ 82271334 (-)
G92661 NA non-coding upstream 56270 82301902 ~ 82302118 (-)
G92669 NA non-coding upstream 68691 82314323 ~ 82314551 (-)
G92566 NA other downstream 70837 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 615256 81607478 ~ 81629726 (-)
LOC110532756 LOC106577174 other downstream 1051117 81175845 ~ 81449471 (-)
G91947 NA other downstream 1196442 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 1201222 81030832 ~ 81031358 (-)
G94201 NA other upstream 1238424 83484056 ~ 83485937 (-)
G94613 NA other upstream 1555700 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 1913191 84157529 ~ 84256949 (-)

Expression


Co-expression Network