LOC110532773 (LOC106600083)


Basic Information

Item Value
gene id LOC110532773
gene name LOC106600083
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82258046 ~ 82266018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989946.1
AGAGCGAATTCGGATCCGTTCCGAGATCATCGGAGAGCCTTTTCGATTTATCAAACCCATTTACCGAGGTTTTGACAAAAATGAATGAGAAAGAACTGCTCCATGGGCTGAACGACCGTTTCGCCGGATTCATAGAGAAGGTGCGTCATTTGGAGCATGAAAATGAATTGTTTGAGAGGGAAATCGAGGAAATCAAACTAAAGGCACAGTCCCCTGCGTCTCTGGCCCAGGAGCACGAGCCGGAGCTTATGGACCTGAGGAACCTAGTTCATGACATCTCCCTTCAGAAGCGTCAGATCGAGATAGAGCATCAGAACCTGGAGGAAGATTTCCTCATCTTGAGAGACAAGTATGAGCAGGAGGCACGTGACCGCTCGAACGCAGAGAACGGTATCCTTGTGCTGAAAAAGGACGCCAACGATGCATACCTTGCCAAACTTCAGTTGGACAACAAAGCGCAGTCTTTGGTGGACGAGATCCACTTCCTGAAGAACAACCATGAGGACGAGATATCAGAAATGGTGGCCCAGATCCAAGAGGCTCAAGTAACGGTCAAGGCATACAACTTTGGCAAACCTGACATCACAGAGGCTCTCCGGGACATCCGTGTGCAGTTAGAAGGTCACGCCACTTCCGACATTCAGCAGGCCGAGGAGGGCTTCCGTGTCCAGTTCGCAAAGTTAACCAAAGCGGCAGAAAGTAACAGGGAGGCGTTGAAGGCAACCCAACAGGAGATCCAGGAGAATAGAAGGCACCTGCAGGGGAAGACAATTGAACTGGACTGTGGTAAAGGAATGAGAGAGGCCCTGGAAAAACAACTACAAGAGCTGGAGGAGCGTCACTATGCAGAATTGATTCATTACCAGGACACTATCAGGCAGCTGGAGAATGAGCTGACCAATGCTAAACTAGACATGTCTGGCTACCTGAGAGAGAACCAGGACCTGCTGAATGTCAAAATGGCTTTGGATGTGGAGATTCTCTCTTACAGGAAACTCCTGGAGGGTGAGGAGTCCCATCTGTACACCATCTCTGACACCCACATCTCCATGCCCTGCATCTACCGCCAGTCCCCCGTCTACACCCTGCCTTGCCTGGCCCGGCAGGGAGGGCCCACACGCAGGTCTGAACCCCAGTACAAGTTTGTTGAGGAGATCATCTCTGAGACCACCAGAGACATGGAGATGTCCGAGATTGAGGAGAAAGGCTCCGAGGAGACGgtcgggggagagggagacaagttgAGACAGAAGCAGGGAGAAGAGAGTGACAAAGCTGAGAGGAGAAGTGGGGAACAGGTGGATGAGCATAAAGAGAAAGCTAGAGGTAAAGTGGATGTTGAAGTGGACGCCCCGGAGGAAGAGGGTGAACAGGAGGAAGAGTCTAAGAGACAGCAGATGGTCACATCAGCAGAGGTCGAGGTAAATGGAGATGGAGTTAGCCCTAGTGAGGGAGaaaatggagaggagggagatgatgaaagagaggaggaaaaggggggtgAGCCAGATGCAATCAAAAAGACAGAGGACATTGACAGAGGTGAAAATACACAAAGTGAAGTCAAATCAGCTGAGGCCAccagtgagggagagaaggaaaaacTGGACACAACAGAGAAGCTAGACAGCGAGATAAACGAGACATTAGAAAAAGATGACACCCCAAAACAAGGCAAATCCCAACTAGAGGTTCCCATGAATGGTGACATCTCAACAGAACCCAAAACGTCAGAGTCAGAGGATAGCAAAACAGGAAGTTCAATAAAGGGTGAACCACAGGTCCCCACAGAGGACATCTCCAAAGAACCCAAAAAGGTGTCAgaggagagaaaaatagaaagcCCTTTACAAGAGAAAAAAGAGGTAGATCTGAAAGAGGAGAGTGCCCCAACAGAGCAACAACAAGATAGCCCAAAAGAAAGTCCCATCAAAGAGGGGAAAAAGGTAGATCTGACAGACCAGAGTGCCCCAACACTGGAGCAGAAACCTGATCAGAAGGAGCACAGAGAGTCAGACCAACCTCAAGAGGCAGAGAGTGCTGTGACAACACAAGAAGAGGATCTCCCTGAGCCCACAGAGAAGGACATGGAATCCCCTGATAACACTGCAGAGCTCAACACCAGTTCAACCAAGGAGACAGTGGAGCAGGTGAAGTCACCTGATGATTCTGGTGTAAAAACGACACAAGATGAGAGAACAGTAGGAGGTAAAATGCCAGACAGAATTCTCAGCACAACAAGTGAGTGTAAGGAAGACCTTGTGCAAAAGATTCCTAAAAAGGAGGTGGGTCCGACAGAGCAAAAAGTGAGCAGCAAGGATGATAGTGTAAAAATTGTTGGCAGTGAAAAGGTCACAAAAGATGTCTCAATGGGTGAGGAAAAAAGGAAAGAATCTGAGACATCCCCCAAACCCGACCCAACTGTCACCCCTAAAGAAGAAACTTCCATTAAACCAGAACCAGCAGTCACTGCAAAAGAAGAAACATCCCCAAAACCAGAACTAGCAGTCACCACTAAAGAAGAAACTTCCCCAAAACCAGAAATAGCAGTCACCACTAAAGAAGAAACGTCCCCAAAACCAGAACTAGCAGTCACGGCTAAATTAGAAACTTCCCCAAAACCAGAACTAGCATTCACCACTAAAGAAGAAACGTCCCAAAAACCAGAACCAGGAGTCATCCCAAAGGTAGATACTTCCCCAAAACCAATCTCAACCATCACCCCTAAAGAAGAAACGTCCCCAAAACCAGAATCAGCAGTCACCCCTAAAGATGACACATCCCCTAAACTGGACCCCACTGTCACTCCTAAAGAAGAAACAACACCGCATCCAGAGCCAACTGTCACCCCTAAAGAGGAGACATCTCCTAAACCATACCCCACTGTCACCCCTAAAGAGGAAACACCCCCAAAACCATTCCTGACAGTCGCCACTAAAGAGGAGACATTCCCTAAACCAGAACTATCAGCCACCGCTAAATTAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCCCTAAAGAACAAACTTCCCCAGAGCCAGAACCAGCAGTCACCCCTAAAGAAGAAACGTCCCAAAAACCAGAACCAGGAGTCATCCCAAAAGTAGAAACTTCACCCAAACCAGAACTAGCAGTTACCCCTAAAGTAGAAACGTCCCCAAAACAAAGCTCAACCATCACCcctaaaaaagaaacgtccccaaAACCAGAACCAGCAGTCGCCCCTAAAGATGACACATTCCCTAAACCGGACCCCACTGTCACTCCTAAAGAAGAAACAACCCCGCATCCAGAGCCAACTGTCACCCCTAAAGAGGAGACATCCCCAAAACCATTCCCGACAGTCGCACCTAAAGAGGAGACATTCCCTAAACCAGAACTATCAGTCACCGCTAAATTAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCACTAAAGAACAAACTTCCCCAAAAGCAGACTCAACCATCACCTTTAAAGAAGAAATTTCCCCAAATCCAGAACCAACAATCACCCCTAAAGAAGAAAATTCCCCAAAACCAGAACTAGCAGTCACCCCTAAAAATATAACATTCCTTAACCCTGAGCCCAGTGTCACTCCTAAAGAAGAAACAACCTCTCAACCAGGGCCAACTGTCACTCCTAAAGAGGAGACACCCCCTAAACCGTACCCCACTATCAACCCTAAAGAAGAAACTTCCATTAAACCAGAACCAGCAGTCACCCCTAAAGAAGAAGCTTCCCCAAAATCAGATTTAACCATCACCCCTAAAGAAGAAACTTCCCCAAAACCAGATCTAGCAGTCACCCCTAAAGTAGAAACTTCACCAAAACCCGAACTAGCAGTCACGGCTAAAGTAGAAACTTCCCCAAAACCAGTACTAGCAGTCACACCTAAAGATGAAATTTCCCCAAAACCAGAACCAGCAGTCACCCCTAAAAATGAAACATTCACTAACCCAGACCCCACTGTCACTCCTAAAGAAGAAACTTCCCCAAAACCAGAACCAGCAGTCACCCCTAAAGTAGAAACTTCCCCAAAACCAGAACCAGCAGTCACCGCTAAAGTAGAAACTTCTCCAAAGCCAGCAGTCACCACTAATGTAGAAATTTCCCTAAAACCAGAGCACACTGTCACTCCTAAAGAAGAAACAACCCCGCAACCAGAGCCAACTGTCACTCCTAAAGAGGAGACTTCCCCTAAACCGTACCCCACTGTATCCACTAAAGAAGAAACATCCCCGCAACAGGAACCAACAGTCACCCCTAAAGAGGAGACATCCCCTAAACCATATCCCACTGTCACCACTAAAGAAGAAACATCCCCTAAACCGTTCCCCACTATTGCCCCTAAAGAGGAGACATCCCCTAAACCAGAACGAGCAGTCACCACTAAAggtaAGGgtaacttcaagttccttggcttccacatcaccaacaaactaacatggcccAAGGACACCAAGAAAGTCATGAAGAGggtatga

Function

NR:

description
mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989946.1 True 4493 mRNA 0.48 4 82258046 82266018

Neighbor

gene id symbol gene type direction distance location
LOC118966722 LOC106600083 coding downstream 12414 82232580 ~ 82245632 (-)
LOC118966721 LOC106577224 coding downstream 39163 82210502 ~ 82218883 (-)
LOC110530609 LOC106577197 coding downstream 59624 82190918 ~ 82198422 (-)
LOC110532767 LOC106577224 coding downstream 70840 82182893 ~ 82187206 (-)
LOC110530583 LOC106577201 coding downstream 101488 82150127 ~ 82156558 (-)
LOC110530601 LOC106577224 coding upstream 9051 82275069 ~ 82288547 (-)
LOC110532782 LOC106577197 coding upstream 25774 82291777 ~ 82301867 (-)
LOC110530617 zn503 coding upstream 173124 82439142 ~ 82442325 (-)
LOC100301648 LOC106577193 coding upstream 683591 82949609 ~ 83267163 (-)
LOC110530648 LOC106577192 coding upstream 1006511 83272529 ~ 83374623 (-)
G92631 NA non-coding downstream 34287 82200416 ~ 82223759 (-)
G92630 NA non-coding downstream 54774 82202855 ~ 82203272 (-)
G92637 NA non-coding downstream 68481 82188300 ~ 82189565 (-)
G92636 NA non-coding downstream 77894 82179295 ~ 82180152 (-)
G92629 LOC106577200 non-coding downstream 78832 82172016 ~ 82179214 (-)
G92632 NA non-coding upstream 4637 82270655 ~ 82271334 (-)
G92661 NA non-coding upstream 35884 82301902 ~ 82302118 (-)
G92669 NA non-coding upstream 48305 82314323 ~ 82314551 (-)
G92642 NA non-coding upstream 56887 82322905 ~ 82323402 (-)
G92566 NA other downstream 96303 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 640722 81607478 ~ 81629726 (-)
LOC110532756 LOC106577174 other downstream 1076583 81175845 ~ 81449471 (-)
G91947 NA other downstream 1221908 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 1226688 81030832 ~ 81031358 (-)
G94201 NA other upstream 1218038 83484056 ~ 83485937 (-)
G94613 NA other upstream 1535314 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 1892805 84157529 ~ 84256949 (-)

Expression


Co-expression Network