LOC110532793 (lox5)



Basic Information


Item Value
gene id LOC110532793
gene name lox5
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 83676064 ~ 83701456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036987115.1
TGTTTAAATGCTTTTACATTGCATGTGTGGTGTCAGTACATTAGGGGTtgtttatgagagagagagagagcgagagagagaggtctacGTATATTCATGAGCAGAAAGGGGAACTCTAATTTGGTCCAGACTCTCTCAAAGTGAACAACCAACACACTTGTAGTAGGTGATCATAGAGTTAACCAGTGGATATCTCCTGCCTattctgtgtgtgtttaccaCCATGCCATCCTACACAGTGACGGTGGCTACAGGGAGCCAGTGGTTTGCAGGGACTGATGACTACATATACATCACCCTGGTGGGAACAGAGGGCTGCAGTGAGAGGACTTTACTGGACAAACCACTCTACAATGACTTCGAGAGAGGGGCGGTGGACTCGTATGATGTGACGGTGGGGGAGAACCTGGGAGAGATGGAGCTGGTGAAGGTAGAGAAGAATAAGTACTGGGTTCAtgatgactggtactgtaagtacaTCACAGTGAAGACTCCCTCTGGAGACTACGTAGAGTACCCCTGCTTCCGCTGGCTGGTGGATGACAAGGAGGTGGTCCTTAGGGACGGCAgagCACGGTTGCCAAAGGATGACAAGACCAGACTGGAGAAGCAGCACCGACGTAAAGAGCTGGAGAGCAGACGGAAAACCTACAGATGGAGTGAGTGGCAGCCTGGGTTTCCTATGAGTATAGATGCCAACACACACAAGGAGCTTCCCAGAGACATCCAGTTTGACAGCGAGAAAGGAGTGGACTTCATTCTCAACTACAGTAAGGCGATAGAGAACCTGTGTGTGAACCAGTTCATGCACATGTTCCAGTCCTCCTGGAATGACTTTTCTGACTTTGAGCGGATCTTCGTCAGGATCAAAAACACCATCTCAGAGTATGTGATGCAGCACTGGAAAGAGGACTTTATGTTTGGATACCAGTACCTGAACGGCTGTAACCCAGTGATGATTCAGAAGTGCACCAAGCTGCCAGAGAAGTTCCCCGTTACACACAACATGGTGGCAgactgtctggagagagagatgactctgGAGGAGGAGATCAAGGCTGGTAACATCTACCTAGCAGACTATGAGTTGATGGAAGACATCAGTCCCAACAGTACAGACCCCTGTACTCTACAGTACCTGGCTGCTCCTATCTGTCTGCTGTACAATAACAGCCAGAGCAAGATCCTGCCTCTGGCCATACAGcTGGGTCAGACTCCAGGGAAAGACAACCCTATCTTCCTGCCCAGTGATGGTCAGTATGACTGGATGCTAGCTAAGATCTGGGTCCGCTCCTCTGACTTCCACATCCACCAGACAGTCACACACCTGCTGAGGACTCACCTGGTCTCGGAGGTGTTTGGAGTGGCCATGTTCAGACAGCTGCCTGCTGTACACCCTGCATATAAGTTACTCCTTCCTCACATTCGTTTCACCATCGCCATCAACACCAAGGCCAGAGAGCAACTCATCTGTGAGTTTGGCATCTTCGATAAGGCCAATGGTACAGGAGGTGGAGGTCATGTTGAGATGATCCAGAAGGCCATGAGGTCACTGACCTTCAGATCTTTGTGTTTCCCTGATGCCATTAAGGCTCGCGGGGTGGACAGCCCTGAGGACCTACCCTACTACTATTACAGAGATGACGGGAACAGGGTCTGGGATGCCAccaagagTTTTGTGTGGGACGTGGTGTGTATCTACTATGACAGTGACAACACAGTACAGAAGGATGAGGAGATCCAGGCGTTCGTTAAAGATGTCTGCAGCTTTGGGATGCAGGACCTTGATTGCTGTGAGTTTCCCAAATCCCTGAAGACACGTGAGGATCTCACGGAGTACCTGACTGTCATCATCTTCACTGCCTCTGCTCACCATGCTGCTGTCAACTTCGGACAGTATGACTGGTGCTCGTGGATCCCCAACGCGCCCCCCACCATGCGGAAGCCCCCTCCCACACAGAAGGGGGTGGTAGATGTGAAGTTCATCATCGAGAGTCTCCCTGACCGCGGCCGGTCCTGCTGGCACCTAGGGGCTGTCTGGGCCCTTAGTCAGTTCCAGGAGAATGAactgTTCCTGGGGATGTACCCAGATGAGCACTTCATAGAGAAGCCTGTGAAGGAGGCCATGGAATCGTTCAGGAAGAGACTGGCAGAGGTCAGCAGTGCCATCAAGATCCGCAACGAAGGCAAGAAACTACCCTACTACTACTTCTCTCCTGACCGCATCCCTAACAGTGTGGCTGtctgagagagggatggaggagggtgagaggaaggatgggagcgagagcgagggagtgatggagggagatatTGTGAACAGtgatttatggtgttgtttcttaCACACAGGGCTGTATGTATATTGTGCTATGAAAAGCACATACCCACTGATGCAATTCATCTTTTTTTGCCAGTGATTTTTAGAAACAGAAAGTGAATCATCATTGTTGTACAATTCAAATGTCAAATAAAAATTCTCAAAATGTG

Function


NR:

description
Arachidonate 5-lipoxygenase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen molecular_function
GO:0005506 iron ion binding molecular_function

KEGG:

id description
K00461 ALOX5; arachidonate 5-lipoxygenase

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036987115.1 True 2490 mRNA 0.50 14 83676064 83701456

Neighbor


gene id symbol gene type direction distance location
LOC110530724 anx11 coding downstream 266764 83386983 ~ 83409300 (-)
LOC110530648 LOC106577192 coding downstream 301441 83272529 ~ 83374623 (-)
LOC100301648 LOC106577193 coding downstream 408901 82949609 ~ 83267163 (-)
LOC110530617 zn503 coding downstream 1233739 82439142 ~ 82442325 (-)
LOC110532782 LOC106577197 coding downstream 1374197 82291777 ~ 82301867 (-)
LOC110530770 slc25a16 coding upstream 11896 83713352 ~ 83721914 (-)
LOC110530866 nfu1 coding upstream 125493 83814162 ~ 83851846 (-)
si:ch211-198a12.6 LOC106577248 coding upstream 249601 83951057 ~ 83956958 (-)
LOC110532804 NA coding upstream 264709 83966165 ~ 83967505 (-)
LOC110530927 LOC106577245 coding upstream 330098 84031554 ~ 84104730 (-)
G94259 NA non-coding downstream 136 83669522 ~ 83675928 (-)
G94314 NA non-coding downstream 9146 83666572 ~ 83666918 (-)
G94313 NA non-coding downstream 10182 83665655 ~ 83665882 (-)
G94312 NA non-coding downstream 10470 83665080 ~ 83665594 (-)
G94311 NA non-coding downstream 11840 83663356 ~ 83664224 (-)
G94333 LOC106577185 non-coding upstream 22452 83723908 ~ 83725485 (-)
G94334 NA non-coding upstream 25273 83726729 ~ 83727048 (-)
G94336 LOC100194703 non-coding upstream 30371 83731827 ~ 83732179 (-)
G94337 NA non-coding upstream 31158 83732614 ~ 83732829 (-)
G94201 NA other downstream 190127 83484056 ~ 83485937 (-)
G92566 NA other downstream 1514321 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 2058740 81607478 ~ 81629726 (-)
G94613 NA other upstream 99876 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 457367 84157529 ~ 84256949 (-)
G94821 NA other upstream 502031 84203487 ~ 84204464 (-)
LOC110532813 LOC106613040 other upstream 590304 84291760 ~ 84331700 (-)
G95494 NA other upstream 1027408 84728864 ~ 84729423 (-)

Expression



Co-expression Network