LOC110531757 (LOC105008298)


Basic Information

Item Value
gene id LOC110531757
gene name LOC105008298
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86154256 ~ 86213640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987739.1
ACATCCTACAAGCCAAACAGTCTCAGTAAGGGTGTGCCTAACGGAGGGATGGCCCAGTTTCAGGAGGAGATGAGGCAGCAGCTGGAGACCTCCATGCACGCAGAGCTGGAGAAACTACTGGACACTGCCACGGGGGTCGACAAGgagGTCTCCAAGAAGGACTTTGATGGATTCAAGAAGCTGTTCCACAGGTTTCTGCAGGTGAAGGGGCCATCGGTGGACTGGCCCAAGATACACAGACCTCCAGAAGACTCAatcCAGCCCTATGATAAGATAGCAGCGCTGCCCCTGCCGGACAGCCTGGCAGACAGTCTCAACAAGCTGGTGGTCGTCAAGTTGAATGGAGGCCTGGGGACCAGCATGGGCTGTAAAGGCCCCAAGAGCCTCATCAGCGTCCGCAACGAGAACACTTTCCTGGACCTCACCGTGCAGCAGATAGAGCACTTGAACAAGAAGTACAACACAGACGTTCCTCTGGTCCTGATGAACTCCTTCAACACGGATGAAGACACCAAGAAGATCCTTCAGAAATACACACACCACCGTGTCAAGATACACACCTTCAACCAGAGCAGGTACCCCCGTATTAATAAAGAGTCCCTCCTGCCTGTGGCCACAGACATTGGTATGATGGGTGAGAACGCTGACGTGTGGTACCCTCCTGGCCACGGGGACATCTACGCCAGCTTCTACAACTCTGGTCTGCTGGATCAGCTCATCACAGAGggcaaggaGTACATCTTTGTGTCTAACATTGATAACCTGGGTGCTACGGTGGACCTGAACATTCTGCATCACCTGGTGAGCCAGCCCAACGGGAAACGCTGTGAGTTCATCATGGAGGTCACCGACAAGACCCGCGCTGACGTCAAGggCGGTACTCTTATTCAGTATGATAACAAGCTGCGTCTGCTGGAGATAGCCCAGGTCCCCAAGGCCCATGTAGATGAGTTCAAATCAGTCACCAAGTTTAAGATCTTCAACACCAACAACCTGTGGATCTCTCTGGGCGCCATCAAGAGGCTGCAGGAGCAGAACGCCATGGACATGGAGATCATCGTTAACCCCAAGACACTGGACGGCGGTCAGAACGTGATCCAGCTGGAGACGGCGGTGGGCGCGGCCATCAAGAGCTTCGACAACGCCCTGGGCATCAACGTGCCGCGATCCCGCTTCCTGCCCGTCAAGACCGTCTCCGACCTCCTATTGGTCATGTCCAACCTCTACAGCCTGGAGGCGGGCTCTCTCACCATGAGCCAGAAGAGAGAGTTCCCTACCACGCCCCACGTCAAGCTGGGCAGCTCTTTTACTAAGGTCCAGGAATACCAGACGCGGTTCGAGAGCATCCCTGATATGCTGGAGCTGGATCACCTGACTGTGTCCGGTGACGTCACGTTTGGAAAACAAGTTTCTCTCAAGggAACGGTCATCATCATAGCCAATCACGGAGATCGTATCGACATCCCGGCTGGAACGATACTGGAGAACAAGATTGTGTCGGGCAACCTTCGCATCTTGGACCACTGAAGCCTTTAACTACTCCTCCAGCACCACAGACACATCCACCACCATCATGTGACGAAGCCAGACACATCCACCACCATCATGTGACCAAGCCAAACACATCAACCccaaccatgtgaccagacatccaCCACCATCATGTGACCAGACACATTCACCCCAATCATGTGACCGAGCCAGACTTGATCCAGACTCCTTTAAATAAACTCCTTAGAGAGGGGTGTCATACCCAACAGATTGTGATGTGATATCCATACTATACAGCCCCCTGCCCATTAGATTCCCTTACTGGATGAGAATCGTGATAGAAGTCATATGGATgtgatgtcaat
>XM_036987726.1
AAAGTTCGGGCGGTGGAGGAATTGAGAAAAGGATTTCATTTGTGAGAGAGGAGTGCTCTAGCAAGTTATGGCTTCAGCAGTCCATTCTGCACTGGGGTGGCCATATAGATGAATGACTGAATGACCATTTGGGGTtttacaaaaaacaaaaaaaaaacgtaattTTTCTTCTGGAATATGTCTTACATTTTATTGGACTATTTGACCAATTTCGTTTCAATATAGTTATAGTTGAATATCCTTGATAACTTGATACGCTGCCTAGTGGAAATACCGATTTTGGATTTGTACAGAACATTTGACCTCCATAGGTGATTTCTGATTATTGATCCTTTATAACATTCTGGAATATGGCACGTTATTTTGAAGGTCTCAGTAAGGGTGTGCCTAACGGAGGGATGGCCCAGTTTCAGGAGGAGATGAGGCAGCAGCTGGAGACCTCCATGCACGCAGAGCTGGAGAAACTACTGGACACTGCCACGGGGGTCGACAAGgagGTCTCCAAGAAGGACTTTGATGGATTCAAGAAGCTGTTCCACAGGTTTCTGCAGGTGAAGGGGCCATCGGTGGACTGGCCCAAGATACACAGACCTCCAGAAGACTCAatcCAGCCCTATGATAAGATAGCAGCGCTGCCCCTGCCGGACAGCCTGGCAGACAGTCTCAACAAGCTGGTGGTCGTCAAGTTGAATGGAGGCCTGGGGACCAGCATGGGCTGTAAAGGCCCCAAGAGCCTCATCAGCGTCCGCAACGAGAACACTTTCCTGGACCTCACCGTGCAGCAGATAGAGCACTTGAACAAGAAGTACAACACAGACGTTCCTCTGGTCCTGATGAACTCCTTCAACACGGATGAAGACACCAAGAAGATCCTTCAGAAATACACACACCACCGTGTCAAGATACACACCTTCAACCAGAGCAGGTACCCCCGTATTAATAAAGAGTCCCTCCTGCCTGTGGCCACAGACATTGGTATGATGGGTGAGAACGCTGACGTGTGGTACCCTCCTGGCCACGGGGACATCTACGCCAGCTTCTACAACTCTGGTCTGCTGGATCAGCTCATCACAGAGggcaaggaGTACATCTTTGTGTCTAACATTGATAACCTGGGTGCTACGGTGGACCTGAACATTCTGCATCACCTGGTGAGCCAGCCCAACGGGAAACGCTGTGAGTTCATCATGGAGGTCACCGACAAGACCCGCGCTGACGTCAAGggCGGTACTCTTATTCAGTATGATAACAAGCTGCGTCTGCTGGAGATAGCCCAGGTCCCCAAGGCCCATGTAGATGAGTTCAAATCAGTCACCAAGTTTAAGATCTTCAACACCAACAACCTGTGGATCTCTCTGGGCGCCATCAAGAGGCTGCAGGAGCAGAACGCCATGGACATGGAGATCATCGTTAACCCCAAGACACTGGACGGCGGTCAGAACGTGATCCAGCTGGAGACGGCGGTGGGCGCGGCCATCAAGAGCTTCGACAACGCCCTGGGCATCAACGTGCCGCGATCCCGCTTCCTGCCCGTCAAGACCGTCTCCGACCTCCTATTGGTCATGTCCAACCTCTACAGCCTGGAGGCGGGCTCTCTCACCATGAGCCAGAAGAGAGAGTTCCCTACCACGCCCCACGTCAAGCTGGGCAGCTCTTTTACTAAGGTCCAGGAATACCAGACGCGGTTCGAGAGCATCCCTGATATGCTGGAGCTGGATCACCTGACTGTGTCCGGTGACGTCACGTTTGGAAAACAAGTTTCTCTCAAGggAACGGTCATCATCATAGCCAATCACGGAGATCGTATCGACATCCCGGCTGGAACGATACTGGAGAACAAGATTGTGTCGGGCAACCTTCGCATCTTGGACCACTGAAGCCTTTAACTACTCCTCCAGCACCACAGACACATCCACCACCATCATGTGACCAAGCCAAACACATCAACCccaaccatgtgaccagacatccaCCACCATCATGTGACCAGACACATTCACCCCAATCATGTGACCGAGCCAGACTTGATCCAGACTCCTTTAAATAAACTCCTTAGAGAGGGGTGTCATACCCAACAGATTGTGATGTGATATCCATACTATACAGCCCCCTGCCCATTAGATTCCCTTACTGGATGAGAATCGTGATAGAAGTCATATGGATgtgatgtcaatgggagatt
>XM_036987722.1
AGTTCGGGCGGTGGAGGAATTGAGAAAAGGATTTCATTTGTGAGAGAGGAGTGCTCTAGCAAGTTATGGCTTCAGCAGTCCATTCTGCACTGGGGTGGCCATATAGATGAATGACTGAATGACCATTTGGGGTtttacaaaaaacaaaaaaaaaacgtaattTTTCTTCTGGAATATGTCTTACATTTTATTGGACTATTTGACCAATTTCGTTTCAATATAGTTATAGTTGAATATCCTTGATAACTTGATACGCTGCCTAGTGGAAATACCGATTTTGGATTTGTACAGAACATTTGACCTCCATAGGTGATTTCTGATTATTGATCCTTTATAACATTCTGGAATATGGCACGTTATTTTGAAGGTCTCAGTAAGGGTGTGCCTAACGGAGGGATGGCCCAGTTTCAGGAGGAGATGAGGCAGCAGCTGGAGACCTCCATGCACGCAGAGCTGGAGAAACTACTGGACACTGCCACGGGGGTCGACAAGgagGTCTCCAAGAAGGACTTTGATGGATTCAAGAAGCTGTTCCACAGGTTTCTGCAGGTGAAGGGGCCATCGGTGGACTGGCCCAAGATACACAGACCTCCAGAAGACTCAatcCAGCCCTATGATAAGATAGCAGCGCTGCCCCTGCCGGACAGCCTGGCAGACAGTCTCAACAAGCTGGTGGTCGTCAAGTTGAATGGAGGCCTGGGGACCAGCATGGGCTGTAAAGGCCCCAAGAGCCTCATCAGCGTCCGCAACGAGAACACTTTCCTGGACCTCACCGTGCAGCAGATAGAGCACTTGAACAAGAAGTACAACACAGACGTTCCTCTGGTCCTGATGAACTCCTTCAACACGGATGAAGACACCAAGAAGATCCTTCAGAAATACACACACCACCGTGTCAAGATACACACCTTCAACCAGAGCAGGTACCCCCGTATTAATAAAGAGTCCCTCCTGCCTGTGGCCACAGACATTGGTATGATGGGTGAGAACGCTGACGTGTGGTACCCTCCTGGCCACGGGGACATCTACGCCAGCTTCTACAACTCTGGTCTGCTGGATCAGCTCATCACAGAGggcaaggaGTACATCTTTGTGTCTAACATTGATAACCTGGGTGCTACGGTGGACCTGAACATTCTGCATCACCTGGTGAGCCAGCCCAACGGGAAACGCTGTGAGTTCATCATGGAGGTCACCGACAAGACCCGCGCTGACGTCAAGggCGGTACTCTTATTCAGTATGATAACAAGCTGCGTCTGCTGGAGATAGCCCAGGTCCCCAAGGCCCATGTAGATGAGTTCAAATCAGTCACCAAGTTTAAGATCTTCAACACCAACAACCTGTGGATCTCTCTGGGCGCCATCAAGAGGCTGCAGGAGCAGAACGCCATGGACATGGAGATCATCGTTAACCCCAAGACACTGGACGGCGGTCAGAACGTGATCCAGCTGGAGACGGCGGTGGGCGCGGCCATCAAGAGCTTCGACAACGCCCTGGGCATCAACGTGCCGCGATCCCGCTTCCTGCCCGTCAAGACCGTCTCCGACCTCCTATTGGTCATGTCCAACCTCTACAGCCTGGAGGCGGGCTCTCTCACCATGAGCCAGAAGAGAGAGTTCCCTACCACGCCCCACGTCAAGCTGGGCAGCTCTTTTACTAAGGTCCAGGAATACCAGACGCGGTTCGAGAGCATCCCTGATATGCTGGAGCTGGATCACCTGACTGTGTCCGGTGACGTCACGTTTGGAAAACAAGTTTCTCTCAAGggAACGGTCATCATCATAGCCAATCACGGAGATCGTATCGACATCCCGGCTGGAACGATACTGGAGAACAAGATTGTGTCGGGCAACCTTCGCATCTTGGACCACTGAAGCCTTTAACTACTCCTCCAGCACCACAGACACATCCACCACCATCATGTGACGAAGCCAGACACATCCACCACCATCATGTGACCAAGCCAAACACATCAACCccaaccatgtgaccagacatccaCCACCATCATGTGACCAGACACATTCACCCCAATCATGTGACCGAGCCAGACTTGATCCAGACTCCTTTAAATAAACTCCTTAGAGAGGGGTGTCATACCCAACAGATTGTGATGTGATATCCATACTATACAGCCCCCTGCCCATTAGATTCCCTTACTGGATGAGAATCGTGATAGAAGTCATATGGATgtgatgtcaat
>XM_036987733.1
GGTCTAAGTGACTAAGGTGTCTCTCCTGTATTTCCTGGTCCAGGTCTGAGTGACTAAGGTGTCTCTCCTGTATTTCCTGGTCCAGGTCTGAGTGACTAAGGTGTCTCCCCTGTATTTCCTGATCCAGGTCTCAGTAAGGGTGTGCCTAACGGAGGGATGGCCCAGTTTCAGGAGGAGATGAGGCAGCAGCTGGAGACCTCCATGCACGCAGAGCTGGAGAAACTACTGGACACTGCCACGGGGGTCGACAAGgagGTCTCCAAGAAGGACTTTGATGGATTCAAGAAGCTGTTCCACAGGTTTCTGCAGGTGAAGGGGCCATCGGTGGACTGGCCCAAGATACACAGACCTCCAGAAGACTCAatcCAGCCCTATGATAAGATAGCAGCGCTGCCCCTGCCGGACAGCCTGGCAGACAGTCTCAACAAGCTGGTGGTCGTCAAGTTGAATGGAGGCCTGGGGACCAGCATGGGCTGTAAAGGCCCCAAGAGCCTCATCAGCGTCCGCAACGAGAACACTTTCCTGGACCTCACCGTGCAGCAGATAGAGCACTTGAACAAGAAGTACAACACAGACGTTCCTCTGGTCCTGATGAACTCCTTCAACACGGATGAAGACACCAAGAAGATCCTTCAGAAATACACACACCACCGTGTCAAGATACACACCTTCAACCAGAGCAGGTACCCCCGTATTAATAAAGAGTCCCTCCTGCCTGTGGCCACAGACATTGGTATGATGGGTGAGAACGCTGACGTGTGGTACCCTCCTGGCCACGGGGACATCTACGCCAGCTTCTACAACTCTGGTCTGCTGGATCAGCTCATCACAGAGggcaaggaGTACATCTTTGTGTCTAACATTGATAACCTGGGTGCTACGGTGGACCTGAACATTCTGCATCACCTGGTGAGCCAGCCCAACGGGAAACGCTGTGAGTTCATCATGGAGGTCACCGACAAGACCCGCGCTGACGTCAAGggCGGTACTCTTATTCAGTATGATAACAAGCTGCGTCTGCTGGAGATAGCCCAGGTCCCCAAGGCCCATGTAGATGAGTTCAAATCAGTCACCAAGTTTAAGATCTTCAACACCAACAACCTGTGGATCTCTCTGGGCGCCATCAAGAGGCTGCAGGAGCAGAACGCCATGGACATGGAGATCATCGTTAACCCCAAGACACTGGACGGCGGTCAGAACGTGATCCAGCTGGAGACGGCGGTGGGCGCGGCCATCAAGAGCTTCGACAACGCCCTGGGCATCAACGTGCCGCGATCCCGCTTCCTGCCCGTCAAGACCGTCTCCGACCTCCTATTGGTCATGTCCAACCTCTACAGCCTGGAGGCGGGCTCTCTCACCATGAGCCAGAAGAGAGAGTTCCCTACCACGCCCCACGTCAAGCTGGGCAGCTCTTTTACTAAGGTCCAGGAATACCAGACGCGGTTCGAGAGCATCCCTGATATGCTGGAGCTGGATCACCTGACTGTGTCCGGTGACGTCACGTTTGGAAAACAAGTTTCTCTCAAGggAACGGTCATCATCATAGCCAATCACGGAGATCGTATCGACATCCCGGCTGGAACGATACTGGAGAACAAGATTGTGTCGGGCAACCTTCGCATCTTGGACCACTGAAGCCTTTAACTACTCCTCCAGCACCACAGACACATCCACCACCATCATGTGACGAAGCCAGACACATCCACCACCATCATGTGACCAAGCCAAACACATCAACCccaaccatgtgaccagacatccaCCACCATCATGTGACCAGACACATTCACCCCAATCATGTGACCGAGCCAGACTTGATCCAGACTCCTTTAAATAAACTCCTTAGAGAGGGGTGTCATACCCAACAGATTGTGATGTGATATCCATACTATACAGCCCCCTGCCCATTAGATTCCCTTACTGGATGAGAATCGTGATAGAAGTCATATGGATgtgatgtcaat

Function

NR:

description
UTP--glucose-1-phosphate uridylyltransferase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K00963 UGP2, galU, galF; UTP--glucose-1-phosphate uridylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987739.1 False 1856 mRNA 0.53 11 86154256 86213632
XM_036987726.1 False 2182 mRNA 0.50 12 86155344 86213640
XM_036987722.1 False 2204 mRNA 0.50 11 86155346 86213632
XM_036987733.1 True 1964 mRNA 0.53 11 86167420 86213632

Neighbor

gene id symbol gene type direction distance location
LOC110531764 LOC106577387 coding upstream 1529 86141873 ~ 86153265 (+)
LOC110514631 lmbrd1 coding upstream 291248 85641603 ~ 85863008 (+)
LOC110513561 LOC106560234 coding upstream 802832 85304274 ~ 85351424 (+)
LOC110511715 LOC106613617 coding upstream 973108 85177654 ~ 85181148 (+)
LOC110531368 slc35f3 coding upstream 994342 85012902 ~ 85159914 (+)
LOC118966021 NA coding downstream 1938 86215568 ~ 86216902 (+)
LOC118966023 LOC106577312 coding downstream 187102 86400742 ~ 86409832 (+)
LOC118966024 LOC106562881 coding downstream 206474 86420114 ~ 86443279 (+)
LOC118966027 LOC106592896 coding downstream 245428 86459068 ~ 86529078 (+)
LOC118966031 NA coding downstream 259751 86473391 ~ 86480688 (+)
G96518 NA non-coding upstream 13420 86140619 ~ 86140836 (+)
G96517 NA non-coding upstream 15608 86138239 ~ 86138648 (+)
G96396 NA non-coding upstream 167974 85984316 ~ 85986282 (+)
G96392 NA non-coding upstream 174829 85976758 ~ 85979427 (+)
G96537 LOC106569852 non-coding downstream 7605 86221245 ~ 86223867 (+)
G96538 NA non-coding downstream 10465 86224105 ~ 86229345 (+)
G96502 LOC106563028 non-coding downstream 19580 86233220 ~ 86237454 (+)
G96543 NA non-coding downstream 30660 86244300 ~ 86244999 (+)
G96133 NA other upstream 516201 85637747 ~ 85638055 (+)
G95821 NA other upstream 918862 85234821 ~ 85235394 (+)
G95702 NA other upstream 1013250 85140140 ~ 85141006 (+)
LOC110532822 LOC106577256 other upstream 1744204 84373236 ~ 84410052 (+)
G94463 NA other upstream 2106107 84045311 ~ 84048149 (+)
G96577 NA other downstream 197567 86411207 ~ 86413212 (+)
G96630 LOC106592896 other downstream 246588 86460228 ~ 86572480 (+)
LOC118966033 LOC106562881 other downstream 278429 86492069 ~ 86495729 (+)
G97752 NA other downstream 1543401 87757041 ~ 87757546 (+)

Expression


Co-expression Network