LOC118966023 (LOC106577312)


Basic Information

Item Value
gene id LOC118966023
gene name LOC106577312
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86400742 ~ 86409832 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987794.1
tgtaaataagaatgtgttcttcaactggcttgcctagttaaataaaggttacattttcaaGAACATAAGTAGCTGTACTCTTATAGCCTAGAATTATATATCAAATCGTTTGTTTCTTTAGCGCCACATTTTGTTCACTATCATTATCATCCCAAAATGGTTACATTTTCTATCCTAGGCTCCTACTACATACCAGGCCTCATTAATTAGTCTAGGAACGAAGCTATGCAAAATATCTCCACTCAAGATTAGAATCGAATGAGAGAAGTGCCCCCACTTCATGGGGGTACAGTTTAATTAGGTGAAGGTTCTTTGTCGGAAATTTAAAATCTGATTAGCCTGGCTCGTTCTCGTTCACGAACAGACGGGGATTACCAAAGCCCCTCTTACTATTGTAAAGCATACGTCAGCAAAATAAAAAGACTATCCACCCATTTCTACAGCGGATAAATACAGCCCAGACATAGCCTACTACAACACCTCACCCAGGCTACACCAGACGTATCCTAGTCCTAAATGTGAATACCGCAGGTAATTCCACGTATTGTTTACGATTCATCTCCGCTGCATGTGGAGTGTGAGTGTGGACACCTAGAAATATGTTGACTGAGTCACTGCTGCCACGACGCTGACACATTCCAGGAGAGGAGGACTGTCCGGGCTGCCTCTCTTCTGATAAGCATCCTATGGTATTCTGTACAAGTCAAGATGGCGGTGTCGGCAACGGAAAGGGACGCAATAAATACTGAAGATGACCATCACAACGATTCGTTCGGGAACCCCGGGCTTATCTCGCCGGATAGGGAGGACATTACACGGCTTCTGAAGGTGCCATTCACCGGCCGCATCAGAGGTGGTATGAGGCCTGGGAAAAAGGTCATTGTCATGGGCATTGTTGATCTGGAGCCTGACAGCTTTGACGTCAGCCTGACTTGCGGCCGCGGCACAGAGAAGGAGGAGCCACAGCCGGATGTGGCCCTGAAACTCAGCGCTCGATTCGCTGAGCGCCAGTTTCTGCGTAACTCCTGCGTCTCGGGAAAATGGAGCGAGGAGGAGAAGTCTATCGACTACTTCCCCTTCATCCCTGACCAGCCCTTTAGGatggaGATCCACTGCGAACACACGCGCTTCCGGATATTTGTGGATGGAAATCCGCTCTTTGACTTTTTTCACAAAGTTAAATCTTTGCCGTCCATCGATACAGTGAGGATAGAAGGGGGTCTACAGATCACCAAGCTAGGTTAACCAACCCAGCTGCTATGCCAGTGTGTGACATAACAAGAACTCAAtacaggtgaacacacacacctgttactacAATACCCACAATGCAACACTGCAGCAACAGTGGGCCTAGTGCTTTGGAAAGGCCTCGCCCATCCCGGTTTGGTTCTGCCGtcactcctcttcttctttcctctTTATCTTGTCAGGTCTCAACCAAGATCTGACGTTATTGTGACCTTCCTAATTGTTGGTTGAATGGTTGCAATGCAACAcagctctgtgtgtctttgttcCTGAAAGAATTCCATTGTTTTCTTCCTCAGTTCTGTGTGTGTCAGGGATCTCACAATATAAACGCCTGCTCATGGTTACCAAGCATCCTATGGGGATTTTGCTGAGAGAGGGGGCCCTATTCCAAATGTAATAGGGCACTATTGGGCACtagagtgctatttgggacacagccgtAGAGCACTCAAAAGTATTTGCTTTCATGTGGAGAAATCCTACAATTCTCAGGAGGTTTCTCAGGAATCAACACTATTTATCACGTATAACATCATCACTGTAAATGAGGGTTATCTCGTGGGGTTGACAAGCTCAGTATTATGGGAGCTTCCatttttttccctccctccctgttcttCAATTGGGttttattggttggttggttgtcaTGGTTATTGGCATCCTAACTCAATGACCTACATACAGAGTTTGCATTCTAAATtgcattctattccctatatagtgcactactttgatcaGGGCCTTATTGGGCTCTGGCCAAAACTattgcactacgtagggaatagggtgccatttggaaaggGAAATGAGGATTATATTGTGGAGTCTCGGCAAGATGTACCGTAGCAGCTTTTTGATTGAAATGTCTTGTATGCAATGTATTAATAATGGTGGTTCTCACTCACAGTTTCAGTTCATTGCAACCATTCTCCTCCTGTAGATATTGCACTGACATAGAGCTATGTGGTAGTGAATAGAATGTATCGTTCATTTGGAGCTTCGTTTACATTGCTTATTTAACAGTGATGAATGATTGGTTAATTTAAAGGGGTAGTTCACCacaaaatccaagtttatcagaTGTGTTTTATACCTCAACTGTTCTGTGTGGAGCTAATAAACTGGAATTAGAGGTG

Function

NR:

description
galectin-related protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987794.1 True 2393 mRNA 0.45 5 86400742 86409832

Neighbor

gene id symbol gene type direction distance location
LOC118966021 NA coding upstream 183840 86215568 ~ 86216902 (+)
LOC110531757 LOC105008298 coding upstream 187102 86154256 ~ 86213640 (+)
LOC110531764 LOC106577387 coding upstream 248015 86141873 ~ 86153265 (+)
LOC110514631 lmbrd1 coding upstream 537734 85641603 ~ 85863008 (+)
LOC110513561 LOC106560234 coding upstream 1049318 85304274 ~ 85351424 (+)
LOC118966024 LOC106562881 coding downstream 10282 86420114 ~ 86443279 (+)
LOC118966027 LOC106592896 coding downstream 49236 86459068 ~ 86529078 (+)
LOC118966031 NA coding downstream 63559 86473391 ~ 86480688 (+)
LOC118966033 LOC106562881 coding downstream 82273 86492069 ~ 86495729 (+)
LOC118966725 NA coding downstream 127593 86537425 ~ 86553655 (+)
G96611 NA non-coding upstream 6028 86394511 ~ 86394714 (+)
G96547 NA non-coding upstream 8776 86297635 ~ 86391966 (+)
G96574 NA non-coding upstream 64715 86332445 ~ 86336027 (+)
G96573 NA non-coding upstream 68544 86331622 ~ 86332198 (+)
G96566 NA non-coding upstream 87589 86306315 ~ 86313153 (+)
G96578 NA non-coding downstream 7291 86417123 ~ 86417843 (+)
G96582 NA non-coding downstream 9707 86419539 ~ 86419965 (+)
G96632 NA non-coding downstream 69352 86479184 ~ 86479961 (+)
G96631 NA non-coding downstream 72316 86482148 ~ 86596005 (+)
G96133 NA other upstream 762687 85637747 ~ 85638055 (+)
G95821 NA other upstream 1165348 85234821 ~ 85235394 (+)
G95702 NA other upstream 1259736 85140140 ~ 85141006 (+)
LOC110532822 LOC106577256 other upstream 1990690 84373236 ~ 84410052 (+)
G94463 NA other upstream 2352593 84045311 ~ 84048149 (+)
G96577 NA other downstream 1375 86411207 ~ 86413212 (+)
G96630 LOC106592896 other downstream 50396 86460228 ~ 86572480 (+)
G97752 NA other downstream 1347209 87757041 ~ 87757546 (+)

Expression


Co-expression Network