LOC118966043


Basic Information

Item Value
gene id LOC118966043
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 86926439 ~ 86954561 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987970.1
ATGGGCCCCACCAGGTACCCCAGATGCCTTCACTAGAAGTCCATATGATTGGACCACCATATCCACCACTCTGAGAGGTCAAGGTTCAGCAGGAGTCAACACATCTGTATGGACCCAGCCACCATCCTCCCGACCACCACCAGTTCCTACCCGCCCCTGGCAACTGGCTCCTACCAGTCCCTGGCAACCGGCTCCCTCCAGTCCCTGGCAACTGGCTCCCTCCAGTCCCTGGCAACCAAGTTCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCTGGCAACCAAGTCCAGTTCCTACCCGTTCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCTGGAAACCAAGTCCAGTTCCTACCCGTTCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCAGGCAACCAAGTCCAGTTCCTACCAGTCCCAGGCAACCAAGTCCAGTTCCTACCCGTCCCTGGCAACCAAGTCCAGTTCCTACCCGTCCCTGGCAACTAAGTCCAGTTCCTACCAGTTCTTGGCAACCAAGTCCAGTTCCTACCCATCCCAGGCAACCAACTCCTACCCGGCCACCATCAGTCTCTACCCATCCCTGGCAACCAGCTCCCACCCGTCCCTGGCAACCAGCGCCTACCCGGCCACTACTGCCAATTCCTACCCGGCCCTGGCAAACAGCCACTACCCGCCCTCGGCCACCACTGCCAGCTCTTACTCGTCCCTGGCAACCAGCTCCTACCCATTCCCCACCACCAGCCCCTACCCAGCCACCAACAGCTCCCATGCAGCCAACACCACCACCAGTCTGCCATGCTGCCGTCTGTCTTAACGGTGGGACCTGCCATGAGCTGCAGAGGCCCAGTGGAGCTCTGTCCTTCTACTGCGACTGCCCCCTACACTTCACTGGACGCTTCTGTGAGAAAGATACCACAATATTCATCCCCTCGTTCAACGGCACATCGTACTTGGAGCTGCCTCCCCTTGGCTCTCTGCTGCAGTCTCCTGGTGCCAGCGCAGATCCCTCTCACCCTGCCAAAGACACCACTGTTACCCTGTATCTGACTGTCAAAACCAGAGCTACACAGGGCACCATCC

Function

NR:

description
protein eyes shut homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987970.1 True 1253 mRNA 0.59 2 86926439 86954561

Neighbor

gene id symbol gene type direction distance location
LOC110518258 LOC105008825 coding downstream 62319 86783824 ~ 86864120 (-)
LOC118966041 NA coding downstream 193902 86730919 ~ 86732537 (-)
LOC118936335 LOC106592896 coding downstream 228214 86663515 ~ 86698225 (-)
LOC118966040 LOC106592896 coding downstream 276272 86602322 ~ 86650167 (-)
LOC110532855 LOC106562987 coding downstream 524275 86353680 ~ 86402164 (-)
LOC110532959 LOC106577289 coding upstream 3337 86957898 ~ 87049090 (-)
LOC118966727 LOC106577289 coding upstream 207716 87162277 ~ 87166534 (-)
LOC118966728 LOC106577282 coding upstream 213324 87167885 ~ 87204885 (-)
LOC118966729 LOC106577282 coding upstream 252903 87207464 ~ 87230079 (-)
LOC118966045 LOC106577282 coding upstream 278364 87232925 ~ 87242407 (-)
G97379 NA non-coding downstream 12094 86913824 ~ 86914345 (-)
G97315 NA non-coding downstream 119277 86806839 ~ 86807162 (-)
G97313 NA non-coding downstream 119931 86800443 ~ 86806508 (-)
G97312 NA non-coding downstream 121764 86799028 ~ 86804675 (-)
G97401 NA non-coding upstream 15262 86969823 ~ 86997815 (-)
G97440 NA non-coding upstream 84429 87038990 ~ 87039452 (-)
G97461 NA non-coding upstream 131075 87085636 ~ 87086121 (-)
G97376 NA non-coding upstream 145518 87100079 ~ 87364942 (-)
G97474 NA non-coding upstream 179022 87133583 ~ 87134110 (-)
G97308 NA other downstream 138387 86787057 ~ 86788052 (-)
G97251 NA other downstream 303128 86566477 ~ 86623311 (-)
G97176 NA other downstream 533350 86392561 ~ 86393089 (-)
G97047 LOC106577388 other downstream 775100 86146009 ~ 86153321 (-)
G96002 NA other downstream 1574673 85346858 ~ 85351766 (-)
G97535 NA other upstream 339796 87294357 ~ 87294999 (-)
LOC110531505 LOC106597820 other upstream 958741 87911053 ~ 87919678 (-)
pex13 LOC106592834 other upstream 1108901 88054545 ~ 88065123 (-)
G98510 NA other upstream 1264268 88218829 ~ 88220804 (-)
G98549 NA other upstream 1359715 88314276 ~ 88314696 (-)

Expression


Co-expression Network