pex13 (LOC106592834)


Basic Information

Item Value
gene id pex13
gene name LOC106592834
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 88054545 ~ 88065123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614896.2
TTTATCTCCATCCGCCTCGGGACGACTTGGAACGGAATAATGCAATGGAGACGAAGCCTTCTAGGCTCTACTAATCGACGCCGAAAAGATACAACAAAGTTGCTGACTTCAGAGACGTTAAACTTGTCCACTAAGAATGAAAATACAATATAAAATGTGTTATAAAAGAAATCCTCTCTGGCTTTATGCTTTTAAACCAATTATGTATTGTTTCAAACGTTTTCCGTATCGTCTTATTGATTATTTTGGTCTGGCACACAGGAGCCAGCCATGGAGCTAGATATGTAGCAATTTGCTAGTTACTACGGGGGGAAGTGAAGGGAAAACGGTTAAAAACGGTGTAACTTCAGACAATTTGTACGATGGCATCGCAGCCTCCTCCTAAACCGTGGGAAAGGCGGATTCCAGGAGCAGCCATGAGTGCACCAGTTAACTATCGGTCGATTGACTTTGCCCCACCAGGTCCCTCCACCCCCGGCCTCTCTGGTCCCGCCGGTCCTCCCGTCTTGACCCGCATGGTGCCCCCTGTCCCCCCTCgccctgtccagtccatccagtCCTACCGTCCCTCCTACAGCTCCTTCCCTGGCTCCTCCTACAACCCCTATGGTAGCTCCAGCCTCTACGGTGGAGcatacagcccctacagtccctaCAGTGGTGGCTATGGCATGGGAGGGGTGCTCGGTGGGAGCCTGGGCTACAGCCGCTTCGGCCAAACCGGTGGTGAAGACGTGGCGCCCAGTCGGTTTGTCCAACAGGCAGAGGAGAGCAGCCGCGGCGCCTTCCAGTCCATCGAGAGCATCGTCCAGGCCTTCACCTCGGTCAGCATGATGATGGACGCCACCTTCTCGGCCGTCTACAACAGCTTCCGAGCCGTGCTGGATGTAGCCAACCACCTGACACGGTTACGGATGCACTTTACCAAGGTTCTGTCGGCCTTTGCCCTGGTGCGCACCCTGCGCTACCTGTACCGCCGCATACAGAGGATGCTGGGGCTGAGACGGGACGGTGAGGTGGAGGACCTGTGGGCAGACAGCGAAGGAGCTGTTCTGGCGACCAGAGGTGCTGGAGCCGCAATGGAAGACCCCAGAGCCGGAGCGGTCAAGTCGTGGCCCATCTTCCTTTTTCTGGCCGTGGTCCTAGGAGGGCCCTATCTCATCTGGAAGCTGCTGAGCTCTGCCCAGGGGCCAGAGGAGAGCGCCACCAACTGGGCTAGTGGGGAGGATGACCATGTGGTTGCCAGGGCGGAGTATGACTTCACAGCTGCGTCGGAGGAGGAGCTCTCACTGAATGCTGGAGACATGCTCAACCTGGCTCCTAAAGAGCATCAACCCAGGGTGCGTGGGTGGCTGCTGGCCAGTGTAGACGGCCAGACCACAGGCCTCATACCTGCCAACTACGTCAAAGtcctggggaagaggagaggcaggaagcaCGCTGAGCTGGAGAGGCTGGCCCAGGTTCAGGCCCAGCCAGGGAACCCACTGGGCACCACCCTTCAAGCCCCACAGCCTAACCTGGCTACGGGCCCAGTGCCAACTGTATCCCCAGGCTTGGTTTCAGGCCTCGGCCCATTAGAAGCCGTCCCAGTAACTATCCCAGAGGAGCTGCTGGAGAGCGTGTACAGGGAAACGCCAGCCGGTTACAGCAGCCTGGGTCTGGGTGTATTGCCCAGCACCACGACAGCTTCGAGCACAGTGCTCACCATACCAGAGAAGATTGACCTGTGATGTCTGACTTTGTGTTTTCCCACACGTCCGTTGAGGCTGTACGTGGTTTGTTGATGAGCTGTTCTGTAGAGCTCGGTCACGTCCAGCAGTGGGGAAACACATGATTTACATCCAGAAGGTGATTCATGTTCACAATTCAGTGGCTTTGGTTTGACATTTAATCTGCCTGGAATCAATTAGTGAGGTTGGTACATGAGGTATTGAGTACCTGGATAAAAGAGAAGTGGGTATCTGTCAGACATCTGGATATGAGTGTTTCCAGAACATTATCTAGATATGAGTGTTTCCAGGACACTGTCTTGGTTTGGCTGTCTTGTCAGTGGTTATCTAGACCAACCTATACCTATCCTGTACCAGCCTTGTCAGTACGGTTACACTACATTTTAGCTCAATAATGATgcatatttaaatgtttttgatATAGATTTATTTAATTAACAGTGAATGAGTACATTAAGATCAAATGAAGCACGCTAAGAGATTATGTGAAAATATTGCATCGTTTGATGCTGACGGGACAAAGCCATAATATTATGTTTAACCTTTTTGTTCCAAGTTAATGTCGATGGTTTGATATTTAAAGATAAATTCATAGGAATAGAAGCTCTAACCCTGGCAAGTTGACTGGTACACTCACAATGGCTGCCTGATTGTGACTCAATCGTTTCCATGGTATTTTGGAATGTTCTATCAACTGCTGGGTTGCCACGGTAATGTGAAACATTTATTCAAATGAtgctaactgatgtggctcatacAATGGCATGTGTTGAGTTGACATCACAGCCCCAATTGAATGGTACACTTCCTACTTGTACTTCCTGGCATGGGTCTAGGTTGAAGATGGGAATATTTTAAAACCTAGACATGGGTACACTCGATGTCTACCAGTCCACGTATTATGTCATCATTGACTTGGAGACTATTTCTATGGATAAATTACTATCAAGGTTCAGATTTGGTTCTAATGGAAGGATGGGACTTGGTTTTTAAATCGGTGTTAATATGGTTGTAAAATGTTGTTTGAAATTCGGGAATGGTCCAACTATATCTTGAATGTTCTGTAAAATGTCCTAAATAATTCAAAGTGAAGTTTTGAACTTGGAAAATTGAACTATCCAATATCAAGATATATTAACTCAAGAAGTTTTGTTGAATGCATCTGTAAGATCTGAAATAGCCAGTCCTCATCTTGGTGTTTCAGTGGCATTTTAAGTCCTCACTCACCTGAAAAACTGTAATTATGTAAATACAATTATTTTGGAAATAAACATTTTCAAAACCTGAAAA
>TU109033
CATGGAGCTAGATATGTAGCAATTTGCTAGTTACTACGGGGGGAAGTGAAGGGAAAACGGTTAAAAACGGTGTAACTTCAGACAATTTGTACGATGGCATCGCAGCCTCCTCCTAAACCGTGGGAAAGGCGGATTCCAGGAGCAGCCATGAGTGCACCAGTTAACTATCGGTCGATTGACTTTGCCCCACCAGGTCCCTCCACCCCCGGCCTCTCTGGTCCCGCCGGTCCTCCCGTCTTGACCCGCATGGTGCCCCCTGTCCCCCCTCgccctgtccagtccatccagtCCTACCGTCCCTCCTACAGCTCCTTCCCTGGCTCCTCCTACAACCCCTATGGTAGCTCCAGCCTCTACGGTGGAGcatacagcccctacagtccctaCAGTGGTGGCTATGGCATGGGAGGGGTGCTCGGTGGGAGCCTGGGCTACAGCCGCTTCGGCCAAACCGGTGGTGAAGACGTGGCGCCCAGTCGGTTTGTCCAACAGGCAGAGGAGAGCAGCCGCGGCGCCTTCCAGTCCATCGAGAGCATCGTCCAGGCCTTCACCTCGGTCAGCATGATGATGGACGCCACCTTCTCGGCCGTCTACAACAGCTTCCGAGCCGTGCTGGATGTAGCCAACCACCTGACACGGTTACGGATGCACTTTACCAAGGTTCTGTCGGCCTTTGCCCTGGTGCGCACCCTGCGCTACCTGTACCGCCGCATACAGAGGATGCTGGGGCTGAGACGGGACGGTGAGGTGGAGGACCTGTGGGCAGACAGCGAAGGAGCTGTTCTGGCGACCAGAGGTGCTGGAGCCGCAATGGAAGACCCCAGAGCCGGAGCGGTCAAGTCGTGGCCCATCTTCCTTTTTCTGGCCGTGGTCCTAGGAGGGCCCTATCTCATCTGGAAGCTGCTGAGCTCTGCCCAGGGGCC
>TU109035
GTTTCAAACGTTTTCCGTATCGTCTTATTGATTATTTTGGTCTGGCACACAGGAGCCAGCCATGGAGCTAGATATGTAGCAATTTGCTAGTTACTACGGGGGGAAGTGAAGGGAAAACGGTTAAAAACGGTGTAACTTCAGACAATTTGTACGATGGCATCGCAGCCTCCTCCTAAACCGTGGGAAAGGCGGATTCCAGGAGCAGCCATGAGTGCACCAGTTAACTATCGGTCGATTGACTTTGCCCCACCAGGTCCCTCCACCCCCGGCCTCTCTGGTCCCGCCGGTCCTCCCGTCTTGACCCGCATGGTGCCCCCTGTCCCCCCTCgccctgtccagtccatccagtCCTACCGTCCCTCCTACAGCTCCTTCCCTGGCTCCTCCTACAACCCCTATGGTAGCTCCAGCCTCTACGGTGGAGcatacagcccctacagtccctaCAGTGGTGGCTATGGCATGGGAGGGGTGCTCGGTGGGAGCCTGGGCTACAGCCGCTTCGGCCAAACCGGTGGTGAAGACGTGGCGCCCAGTCGGTTTGTCCAACAGGCAGAGGAGAGCAGCCGCGGCGCCTTCCAGTCCATCGAGAGCATCGTCCAGGCCTTCACCTCGGTCAGCATGATGATGGACGCCACCTTCTCGGCCGTCTACAACAGCTTCCGAGCCGTGCTGGATGTAGCCAACCACCTGACACGGTTACGGATGCACTTTACCAAGGTTCTGTCGGCCTTTGCCCTGGTGCGCACCCTGCGCTACCTGTACCGCCGCATACAGAGGATGCTGGGGCTGAGACGGGACGGTGAGGTGGAGGACCTGTGGGCAGACAGCGAAGGAGCTGTTCTGGCGACCAGAGGTGCTGGAGCCGCAATGGAAGACCCCAGAGCCGGAGCGGTCAAGTCGTGGCCCATCTTCCTTTTTCTGGCCGTGGTCCTAGGAGGGCCCTATCTCATCTGGAAGCTGCTGAGCTCTGCCCAGGGGCC

Function

NR:

description
peroxisomal membrane protein PEX13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614896.2 False 3023 mRNA 0.49 4 88054545 88065123
TU109033 False 923 TUCP 0.61 2 88063462 88064854
TU109035 True 983 TUCP 0.53 2 88063462 88064914

Neighbor

gene id symbol gene type direction distance location
LOC110531618 LOC106577176 coding downstream 655 88029528 ~ 88053890 (-)
LOC110531505 LOC106597820 coding downstream 134867 87911053 ~ 87919678 (-)
LOC110508309 LOC106600605 coding downstream 229068 87773812 ~ 87825477 (-)
LOC118966049 ehbp1 coding downstream 308456 87664667 ~ 87746089 (-)
LOC118966042 LOC106577473 coding downstream 772306 87260566 ~ 87282239 (-)
LOC118936685 LOC106577316 coding upstream 26921 88092044 ~ 88124727 (-)
LOC100499622 alb1 coding upstream 65915 88131038 ~ 88144466 (-)
LOC118966733 NA coding upstream 93994 88159117 ~ 88164611 (-)
papolg papolg coding upstream 113829 88178952 ~ 88202158 (-)
LOC118966057 NA coding upstream 162765 88224741 ~ 88230342 (-)
G98445 NA non-coding downstream 26880 88027047 ~ 88027665 (-)
G98399 NA non-coding downstream 32738 88021032 ~ 88021807 (-)
G98444 NA non-coding downstream 35254 88018908 ~ 88019291 (-)
G98427 NA non-coding downstream 62385 87991819 ~ 87992160 (-)
G98424 NA non-coding downstream 71115 87981651 ~ 87983430 (-)
G98473 NA non-coding upstream 36350 88101473 ~ 88102253 (-)
G98478 NA non-coding upstream 46543 88111666 ~ 88114282 (-)
G98488 NA non-coding upstream 100714 88165837 ~ 88167312 (-)
G98499 NA non-coding upstream 132487 88197610 ~ 88197931 (-)
G98501 NA non-coding upstream 139167 88204290 ~ 88204609 (-)
G97535 NA other downstream 759546 87294357 ~ 87294999 (-)
G97308 NA other downstream 1266493 86787057 ~ 86788052 (-)
G97251 NA other downstream 1431234 86566477 ~ 86623311 (-)
G97176 NA other downstream 1661456 86392561 ~ 86393089 (-)
G98510 NA other upstream 153706 88218829 ~ 88220804 (-)
G98549 NA other upstream 249153 88314276 ~ 88314696 (-)
G98616 NA other upstream 486851 88551974 ~ 88644067 (-)
LOC118966065 NA other upstream 712416 88757265 ~ 88782119 (-)
G98878 NA other upstream 1010724 89075847 ~ 89076238 (-)
G98401 NA non-coding downstream 40500 87956645 ~ 88022962 (-)

Expression


Co-expression Network