LOC100499622 (alb1)


Basic Information

Item Value
gene id LOC100499622
gene name alb1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 88131038 ~ 88144466 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988136.1
CCCTGCATTTCTCCATTCCTCGGCTCAATCGCTAGATCCcgtcctccatccatccctccttctctccatccatccctccgtccGTGCGCCTGTCCTTTCATCATGCAGTGGTTGTCTGTCTGCAGCCTGTTGGTGCTGCTGAGTGTGTCAGCCCGGTCTCAGGCTCAGAACCAGATCTGTACCATCTTCACGGAGGCCAAGGAAGATGGATTCAAATCTTTGATCCTTGTAGGGCTGGCTCAGAATCTTCCCGATAGTACGTTGGGTGACTTGGTGCCTCTCATCGCGGAGGCCTTAGCCATGGGCGTCAAATGCTGCTCAGACACTCCTCCAGAGGACTGCGACAGAGATGTGgcggaCCTGTTCCAGAGTGCGGTGTGTTCCTCTGAGACCCTGGTGGAGAAGAACCATCTGAAGATGTGCTGTGAGAAGACTGCCGCTGAGAGGACACACTGCTTCCTGGACCACAAGGCCAAGaTTCCTCGGGACCTGTCCCTCAAAGCTGAGCTGCCCGCTGCAGACCAGTGTGAAGACTTCAAGAAGGACCACAAGGCTTTTGTTGGGAGgttcATCTTCAAGTTCTCCAAGAGTAACACGATGCTACAACCACATGTGATCCTGGCTATCGCCAAAGCTTATGGAGAGGTTCTGACTAGCTGTTGTGGAGAGGCTGAGGCCCAGACTTGCTTCGACACCAAGaaAGCTACTTTCCAACGCGCCGTCGGGAAACGCGTGACTGAACTCAGGGCCCTGTGCATCGTCCACAAGAAATATGGAGACCGCGTTGTCAAGGCCAAGAAGCTGATCCAGTACAGTCAGAAGATGCCTCAGGCCTCTTTCCAGGAGATGGGAGGCATGGTAGACAAGATCGTAGCGACTGTTGCCCCCTGCTGCAGCGGAGACATGGTCACATGCATGAAGGAGAGGAAGGCCCTGGTGGATGAGGTGTGTGCTGATAAGAGTGTGTTGTCTCGCGCGGCGGGTCTGTCAGCATGCTGTAAGGAGGATGCAGTACACAGAGGGTCCTGTGTTGAGGCCATGAAGCCAGACTCTAAGCCAGACGGTCTGTCTGAGCACTACGACGTTCACGCTGACATAGCAGCAGTCTGCCAGACCTTTACCAAGACCCCGGATGTAGCCATGGGgaaGTTGGTGTATGAGATCTCAGTGCGTCACCCTGAGTCGTCTCAGCAGGTGATTCTGAGGTTCGCCAAGGAGGCTGAGCAGGCCTTGCTCCAGTGCTGTGACAAGGAGGACCATGCAGAGTGTGTCAGAACCGCTCTGGCAGGAAGTGATATTGATAAGAAGATCACTGATGAGACTGACTACTACAAGAAGATGTGTGCTGTTGAGACTGGCATGAACAATAACGCCTTTGAGAAGAGTATGATGGTGCACTACACCAGGATAATGCCCCAGGCCTCCTTCGACCAGCTCCACATAGTGTCAGAGAGGGTGCATGATGTTCTCCATGACTGCTGCAAGGACGAGCCAGGCCACTTCATCCTGCCTTGTGCAGAGGAGaagCTGACCGATGCCATCGACGCCACATGTGAGGACTACGACCCCTCCAGCATTAACCCCCGCATCGCCCACTGCTGCAACCAGTCCTACTCCATGAGGAGACCCTGTATCCTGGCCATCCAGCCTGACACGGAGTTCATGCCCCCAGAGCTGGATGCCAGCAACTTCCACATGGGCCCTGAGCTCTGCACCAAGGACAGCAAGGAGCTGCTGCTCTCTGGGAAGAAaCTACTGTATGGTGTGGTCAGACATAAGACCACCATCACTGAGGAGCAGCTGAAGTCCATCTCTACTAAATATCACAGTATGAAGGAGAAGTGCTGTGCTGCTGAGGACCAAGCAGCATGCTTCACTGAGGAGGCACCCAAGCTGGTTGCTGAGAGTGCAGAGCTGGTCAAGGCTTAAGATAGAATTGTGATGATTTTAATTTCAAAAGATGAactgatgatttaaaaaaaataaaaataataaaggTTCTGTCTGTATCGATCCATCTACCTCCCCAGCCTACATTTACACCATGGTGACCTCATCCTCCTATCCACAACGTCTTGTCATCCACTCATAAGTCTGTCTATCAGTGATCTGTGATCGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGCCTTACAGCCTACCCTCATCAAACCTCTATCTGGGATGAATCACGCCGCTGGTTAATTTCTGATAGACATGAATGACTCCTGTCAATCAAATACACATGAATAACTGAATAAAGTCATGTTTATCAACTGTA

Function

symbol description
alb1 Involved in ribosomal large subunit biogenesis. Located in cytoplasm and nucleus.

NR:

description
serum albumin 1 precursor

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005615 extracellular space cellular_component
GO:0046872 metal ion binding molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K16141 ALB; serum albumin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988136.1 True 2463 mRNA 0.51 14 88131038 88144466

Neighbor

gene id symbol gene type direction distance location
LOC118936685 LOC106577316 coding downstream 6311 88092044 ~ 88124727 (-)
pex13 LOC106592834 coding downstream 65915 88054545 ~ 88065123 (-)
LOC110531618 LOC106577176 coding downstream 77148 88029528 ~ 88053890 (-)
LOC110531505 LOC106597820 coding downstream 211360 87911053 ~ 87919678 (-)
LOC110508309 LOC106600605 coding downstream 305561 87773812 ~ 87825477 (-)
LOC118966733 NA coding upstream 14651 88159117 ~ 88164611 (-)
papolg papolg coding upstream 34486 88178952 ~ 88202158 (-)
LOC118966057 NA coding upstream 83422 88224741 ~ 88230342 (-)
LOC118966058 NA coding upstream 87475 88231941 ~ 88234672 (-)
LOC118936686 LOC106594327 coding upstream 92115 88236581 ~ 88270980 (-)
G98478 NA non-coding downstream 16756 88111666 ~ 88114282 (-)
G98473 NA non-coding downstream 28785 88101473 ~ 88102253 (-)
G98445 NA non-coding downstream 103373 88027047 ~ 88027665 (-)
G98399 NA non-coding downstream 109231 88021032 ~ 88021807 (-)
G98444 NA non-coding downstream 111747 88018908 ~ 88019291 (-)
G98488 NA non-coding upstream 21371 88165837 ~ 88167312 (-)
G98499 NA non-coding upstream 53144 88197610 ~ 88197931 (-)
G98501 NA non-coding upstream 59824 88204290 ~ 88204609 (-)
G98502 actr2a non-coding upstream 66495 88210961 ~ 88212201 (-)
G98505 NA non-coding upstream 78865 88223331 ~ 88224678 (-)
G97535 NA other downstream 836039 87294357 ~ 87294999 (-)
G97308 NA other downstream 1342986 86787057 ~ 86788052 (-)
G97251 NA other downstream 1507727 86566477 ~ 86623311 (-)
G98510 NA other upstream 74363 88218829 ~ 88220804 (-)
G98549 NA other upstream 169810 88314276 ~ 88314696 (-)
G98616 NA other upstream 407508 88551974 ~ 88644067 (-)
LOC118966065 NA other upstream 633073 88757265 ~ 88782119 (-)
G98878 NA other upstream 931381 89075847 ~ 89076238 (-)

Expression


Co-expression Network