LOC118936686 (LOC106594327)


Basic Information

Item Value
gene id LOC118936686
gene name LOC106594327
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 88236581 ~ 88270980 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988180.1
TTCGCCGTGACGTAGGGGTGCCTGCACAATCCAACATGGAGTAGCGAGCGATGGGGCTCTAGCGGGGCCACCCCTCGGCAACGCCAGTGCCCATTCAGCAACGCTGAACGGGCCGTCGAAAAACGGGCCCCCAGAATTTAGGAGGCACATGTTTTACTTCACCGTATTACCCTGAGGATTATAAACTTTCGGAGAGTCTTTATTTTACCTAAGCAACTGGTTGGCATGACAAGAAaatgacagcagagagagagagagacctactgtAGTCTCAGACTGAAGCAAAGAGCGCTGTGTATTCACACAAAGGCAGCGGAGAGATAGGCTTCTACGCGGAATAGAAGGGAAAGGACTGAGGATAGGTGTTGAAAAAAATGACGAGCAAAAAGCATGCACCCGCATTGGGATATCATTTCAGGTGAAACGAGAAAATGATAGAAGAAACACACCCAAGCGAtgACAGCTACATGGTGTGTGTAAACGCCGTGGTGATGATGAGGGATGATTCCAGTGGAGGCTGGTTGGTCCAGGACGGGGGGGCTCTGAGTAGAGTGGGAGTCTGCAGGGTCCTGCTCCCCGAGCTGGGGCTGGGACTCGCCCCCCTGGGTCGCTCCCACTTCCTCATCCATGGAGAACGTCTACGGGACAAACAGGTGATCCTGGAGTGTGCTCTGAGGAAGAACCTTGTGTACACCAAGGCCACGCCCACCTTCCACCATTGGATGGTGGAGGACAGGAGGTGTGGCCTGACGTTCCAGAGGCCTGCTGATGCTCGGGCCTTCGACAGGGGCGTACGGAAAGCCATTGAGGCCATggcagaagGCTCCACGACGTCCTCCTCAACACTCCAGAACGAGGCAGAACTGGGCGACGATGATGTGTTCACCAATGCCACAGACAGCTCGTCTAACTCCTCCTCCGAGAGACTGGAGCCCTGTCTGCAGCCACTGGACTCCTCCCCCCTCGCTGACTCATCCCACTTACACAACAACTGCATCCTGGGAAACGACCTCTACGAACCCTATAGGTTGTCAGACCACTACTTCCTAGATCTGCCTCTGCCCCGCATCCCTCGCCACGTCACCTTCCAGGACGACGAGGAGATCGTCAGGATCAACCCTCGGGAACGTTCCTGGGAGCTCCCCTCGGAATCCTCCTCCCGCTCGGAACTCCACATGGACCAACTAGAACGCTCCTGGCTCACGGGCTATGAGGACTACCGCCACGCCACCGTGCGCCACAAATACATCCGCCCGCCAGACGACTCTGAGTCCTATGTCCACTTCGCTAAGAGCGAGCCACACAAACACCACTATAGTTATCCCCTGGTTTCCACACCGGTAGATTCCTCCGACCCCAAACCTACCTTCAGACCTTTACCCAAGAGGCACCACTACGCCGGCTTGGGTTCGCAACACCGCCGTCCAGGGGATCAGGGCTTTGGTGGGGGCGTGGTCTCTACCCAGCCCCAGCCCCTCCTCCCTGGCTCGTCTGATGGACAGGACAAGAAGTCTGAGGAGGGCGGGGTTGGCGAGCGCCTGCAGTGCCAATACTGCGGCGAAACGTTCTACGGCGGTAACAACCGACGGGGGCGCTGCCAGGACGCGCCGGACCCGATCAGGGCGTGCGTCCGGCGGGTCAGCTGCATGTGGCTGGCCGACACACTGCTGTACCACTGCATGTCTGACCCGGAGGGGGACTACTCAGACCCCTGCTCCTGTGAGGGGGGTGGCGAGGGGAGGCTGGGCACACGCTGGGCAGCTCTGCTGGGGTTGTCCCTAGTGGCGCCGTGTCTCTGTCTGTACCCGCCCCTTCACGCCTGCCACCGGGCCGGGGTGGCGTGCGGGAGCTGCGGGGGCAGGCATGAAGCCTCAATGACATAAACCCCAAAAACacgtggaggggagaggggaaggagggggagagggagaagaagagcgGTCCTATGccccattttggttttgtggttttgttactctacagacagatgTGTATATACAGCGGTGGTGTGTTGTGGCTGCCATTTTGAAATGGTGTAAAGATTCATAAAGCTCCTTCTTGTgta
>XM_036988175.1
CCTTCGCCGTGACGTAGGGGTGCCTGCACAATCCAACATGGAGTAGCGAGCGATGGGGCTCTAGCGGGGCCACCCCTCGGCAACGCCAGTGCCCATTCAGCAACGCTGAACGGGCCGTCGAAAAACGGGCCCCCAGAATTTAGGAGGCACATGTTTTACTTCACCGTATTACCCTGAGGATTATAAACTTTCGGAGAGTCTTTATTTTACCTAAGCAACTGGTTGGCATGACAAGAAaatgacagcagagagagagagagacctactgtAGTCTCAGACTGAAGCAAAGAGCGCTGTGTATTCACACAAAGGCAGCGGAGAGATAGGCTTCTACGCGGAATAGAAGGGAAAGGACTGAGGATAGGTGTTGAAAAAAATGACGAGCAAAAAGCATGCACCCGCATTGGGATATCATTTCAGGTGAAACGAGAAAATGATAGAAGAAACACACCCAAGCGAtgACAGCTACATGGTGTGTGTAAACGCCGTGGTGATGATGAGGGATGATTCCAGTGGAGGCTGGTTGGTCCAGGACGGGGGGGCTCTGAGTAGAGTGGGAGTCTGCAGGGTCCTGCTCCCCGAGCTGGGGCTGGGACTCGCCCCCCTGGGTCGCTCCCACTTCCTCATCCATGGAGAACGTCTACGGGACAAACAGGTGAGGGACAAACAGGTGATCCTGGAGTGTGCTCTGAGGAAGAACCTTGTGTACACCAAGGCCACGCCCACCTTCCACCATTGGATGGTGGAGGACAGGAGGTGTGGCCTGACGTTCCAGAGGCCTGCTGATGCTCGGGCCTTCGACAGGGGCGTACGGAAAGCCATTGAGGCCATggcagaagGCTCCACGACGTCCTCCTCAACACTCCAGAACGAGGCAGAACTGGGCGACGATGATGTGTTCACCAATGCCACAGACAGCTCGTCTAACTCCTCCTCCGAGAGACTGGAGCCCTGTCTGCAGCCACTGGACTCCTCCCCCCTCGCTGACTCATCCCACTTACACAACAACTGCATCCTGGGAAACGACCTCTACGAACCCTATAGGTTGTCAGACCACTACTTCCTAGATCTGCCTCTGCCCCGCATCCCTCGCCACGTCACCTTCCAGGACGACGAGGAGATCGTCAGGATCAACCCTCGGGAACGTTCCTGGGAGCTCCCCTCGGAATCCTCCTCCCGCTCGGAACTCCACATGGACCAACTAGAACGCTCCTGGCTCACGGGCTATGAGGACTACCGCCACGCCACCGTGCGCCACAAATACATCCGCCCGCCAGACGACTCTGAGTCCTATGTCCACTTCGCTAAGAGCGAGCCACACAAACACCACTATAGTTATCCCCTGGTTTCCACACCGGTAGATTCCTCCGACCCCAAACCTACCTTCAGACCTTTACCCAAGAGGCACCACTACGCCGGCTTGGGTTCGCAACACCGCCGTCCAGGGGATCAGGGCTTTGGTGGGGGCGTGGTCTCTACCCAGCCCCAGCCCCTCCTCCCTGGCTCGTCTGATGGACAGGACAAGAAGTCTGAGGAGGGCGGGGTTGGCGAGCGCCTGCAGTGCCAATACTGCGGCGAAACGTTCTACGGCGGTAACAACCGACGGGGGCGCTGCCAGGACGCGCCGGACCCGATCAGGGCGTGCGTCCGGCGGGTCAGCTGCATGTGGCTGGCCGACACACTGCTGTACCACTGCATGTCTGACCCGGAGGGGGACTACTCAGACCCCTGCTCCTGTGAGGGGGGTGGCGAGGGGAGGCTGGGCACACGCTGGGCAGCTCTGCTGGGGTTGTCCCTAGTGGCGCCGTGTCTCTGTCTGTACCCGCCCCTTCACGCCTGCCACCGGGCCGGGGTGGCGTGCGGGAGCTGCGGGGGCAGGCATGAAGCCTCAATGACATAAACCCCAAAAACacgtggaggggagaggggaaggagggggagagggagaagaagagcgGTCCTATGccccattttggttttgtggttttgttactctacagacagatgTGTATATACAGCGGTGGTGTGTTGTGGCTGCCATTTTGAAATGGTGTAAAGATTCATAAAGCTCCTTCTTGTgta

Function

NR:

description
sprouty-related, EVH1 domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988180.1 False 2065 mRNA 0.58 6 88236581 88270978
XM_036988175.1 True 2082 mRNA 0.58 6 88236581 88270980

Neighbor

gene id symbol gene type direction distance location
LOC118966058 NA coding downstream 2311 88231941 ~ 88234672 (-)
LOC118966057 NA coding downstream 6239 88224741 ~ 88230342 (-)
papolg papolg coding downstream 34423 88178952 ~ 88202158 (-)
LOC118966733 NA coding downstream 71970 88159117 ~ 88164611 (-)
LOC100499622 alb1 coding downstream 92115 88131038 ~ 88144466 (-)
LOC118966063 NA coding upstream 443893 88714598 ~ 88715755 (-)
LOC118966064 NA coding upstream 445338 88716318 ~ 88717077 (-)
LOC118966065 NA coding upstream 507337 88757265 ~ 88782119 (-)
ghitm LOC100136239 coding upstream 952170 89223150 ~ 89270371 (-)
fbxl15 fbx37 coding upstream 1526932 89797912 ~ 89803793 (-)
G98505 NA non-coding downstream 11903 88223331 ~ 88224678 (-)
G98502 actr2a non-coding downstream 24380 88210961 ~ 88212201 (-)
G98501 NA non-coding downstream 31972 88204290 ~ 88204609 (-)
G98539 NA non-coding upstream 13231 88284211 ~ 88287080 (-)
G98556 NA non-coding upstream 58144 88329124 ~ 88329342 (-)
G98557 NA non-coding upstream 59091 88330071 ~ 88330279 (-)
G98559 NA non-coding upstream 66840 88337820 ~ 88338034 (-)
G98566 NA non-coding upstream 127286 88398266 ~ 88398572 (-)
G98510 NA other downstream 15777 88218829 ~ 88220804 (-)
pex13 LOC106592834 other downstream 171667 88054545 ~ 88065123 (-)
LOC110531505 LOC106597820 other downstream 320681 87911053 ~ 87919678 (-)
G97535 NA other downstream 941582 87294357 ~ 87294999 (-)
G97308 NA other downstream 1448529 86787057 ~ 86788052 (-)
G98549 NA other upstream 43296 88314276 ~ 88314696 (-)
G98616 NA other upstream 280994 88551974 ~ 88644067 (-)
G98878 NA other upstream 804867 89075847 ~ 89076238 (-)

Expression


Co-expression Network