LOC118966063


Basic Information

Item Value
gene id LOC118966063
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 88714598 ~ 88715755 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053271.1
gtggtagaggtgactacagagtggtagaggtgactacagagtggtagaAgtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtggggggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgGGCGATAGAGGTGACTACAGAGTAGTAGAGAtgactacagagtggtagagatgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgACTACAGGGTGGTAGAGATGACTACAGGGTGGTAGAGGTGACtagagagtggtagaggtgaCAATAGAGTGGTAGAGAAGGGGGAtagagg
>XR_005053270.1
gagtggtagaggtgggcgatagaggtgactacagagtggtagagatgactacagagtggtagagatgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgACTACAGGGTGGTAGAGATGACTACAGGGTGGTAGAGGTGACtagagagtggtagaggtgaCAATAGAGTGGTAGAGAAGGGGGAtagaggtgactacagagtggtagaggtgactacagagtggtagagatGACTACAGAATGGTAGAGGTAactacagagtggtagaggtgactacagagtTGTAGAGGTGACTAAAGAGTGGTAGAGTTGACTGCAGAGTGGtagaggtgggggatagaggtgactacagagtggtagagatgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaAgtgactacagagtggtagaggtggggggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgGGCGATAGAGGTGACTACAGAGTAGTAGAGAtgactacagagtggtagagatgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgACTACAGGGTGGTAGAGATGACTACAGGGTGGTAGAGGTGACtagagagtggtagaggtgaCAATAGAGTGGTAGAGAAGGGGGAtagagg
>TU109324
gaggtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtgactacagagtggtagaggtggggggtagaggtgactacagagtggtagagAtgactacagagtggtagagatgactacagagtggtagagGTGACTAAAGAGTGGTAGAGTTGACTGCAGAGTGGtagaggtgggggatagaggtgactacagagtggtagagatgactacagagtggtagaggtgactacagagtggtagaggtggggggtagaggtgactacagagtggtagaggtgactacagagtggtagaagtgactacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053271.1 False 409 mRNA 0.50 2 88714873 88715334
XR_005053270.1 False 770 mRNA 0.50 2 88714873 88715755
TU109324 True 332 lncRNA 0.51 3 88714598 88715235

Neighbor

gene id symbol gene type direction distance location
LOC118936686 LOC106594327 coding downstream 443893 88236581 ~ 88270980 (-)
LOC118966058 NA coding downstream 480603 88231941 ~ 88234672 (-)
LOC118966057 NA coding downstream 484531 88224741 ~ 88230342 (-)
papolg papolg coding downstream 512715 88178952 ~ 88202158 (-)
LOC118966733 NA coding downstream 550262 88159117 ~ 88164611 (-)
LOC118966064 NA coding upstream 563 88716318 ~ 88717077 (-)
LOC118966065 NA coding upstream 62562 88757265 ~ 88782119 (-)
ghitm LOC100136239 coding upstream 507395 89223150 ~ 89270371 (-)
fbxl15 fbx37 coding upstream 1082157 89797912 ~ 89803793 (-)
LOC118966075 LOC106577395 coding upstream 1184583 89900338 ~ 89902518 (-)
G98675 NA non-coding downstream 3770 88708981 ~ 88711103 (-)
G98646 NA non-coding downstream 17122 88696267 ~ 88697751 (-)
G98656 NA non-coding downstream 39504 88675033 ~ 88675369 (-)
G98644 NA non-coding downstream 63456 88650675 ~ 88651417 (-)
G98643 NA non-coding downstream 65107 88646841 ~ 88649766 (-)
G98688 NA non-coding upstream 29975 88745730 ~ 88746010 (-)
G98689 NA non-coding upstream 33181 88748936 ~ 88749160 (-)
G98713 NA non-coding upstream 73336 88789091 ~ 88838601 (-)
G98731 NA non-coding upstream 127530 88843285 ~ 88845344 (-)
G98616 NA other downstream 70806 88551974 ~ 88644067 (-)
G98549 NA other downstream 400177 88314276 ~ 88314696 (-)
G98510 NA other downstream 494069 88218829 ~ 88220804 (-)
pex13 LOC106592834 other downstream 649959 88054545 ~ 88065123 (-)
LOC110531505 LOC106597820 other downstream 798973 87911053 ~ 87919678 (-)
G98878 NA other upstream 360092 89075847 ~ 89076238 (-)
G99035 NA other upstream 571459 89287214 ~ 89290056 (-)
G99595 NA other upstream 1241637 89957392 ~ 89957916 (-)

Expression


Co-expression Network