LOC118966069


Basic Information

Item Value
gene id LOC118966069
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89018704 ~ 89020600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988247.1
acacacacacacacacacacacacacaaccacacacacacacacacacaaccacacacacacacacacacacttgagagATGCTGCACTTGTTTAGCTGCTTATATTCTCACTGTTGTTCTTTCTGGAGGTCACTGAGAAGTTGAGTAGAATATACAACAGCAACACTGTATCAGGAGTCACAGCAACCGGTTGGCTTGTAAATGCCTTTACAGCACCTCAAAGGGAGATTTGTGtcacttttgttgttgttgttgttgtttacacgtCTGTTGACATTCCAAGTAGATAATGAGTCGTCTTGATGAGCAATGTGGAGATCTTGTTCTACTGTCTTCCAATAGTATCTCTCAGATAAACTATAGGTCCACAACTCACCTTGTTGCTGCAACATGATAGTACATTATCTTTACACTGCATGCTGTATATTAGTACCTTGTGTTCTGCACCTTTACCCAGAAATGAGAATAACTCCAACACTAAGCAGGTTTCCATCCAAACTCTTTATGTGAGTCGGGAAAGAAAATGTCACCACAGACCTGATGGAAACGGCAAATTTGTCAGTGAACTtgtccaaatgtcgacaaaacaataTATGCTAGACAAGATGGGATATGAGATGGGTGGTAAAAGTCTAAAGTGATGATGCTCCTTACCATTCAATATCAAGGGCTTTATTCTGgtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGGCTTTATTCTGGTGACAGGATGATGCTCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatggtGCTCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACTATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatgctCCTTACCATTCAATATCAAGGgctttattctggtgacatgatgatcgatgcttcgctgccgtttgacaaataagaAAGAAATCTTTCTCTTTTgcccataataatctcatcatgtaggctataggcctacccGCATCTGTGAGCTAGAACATGTGTCAAAACCAGAGTGGGACACATTTGCTATACAACGCAACAATTTGTAGTGACAAAgtcatcagtagagttgaaaatgttaccttttatttaactaggcaagttccagaacaaattcttatttacaatgacggccaaacccagacgacgctgtgcCAGTTGTGCTccaccctgtgggactcc

Function

NR:

description
PREDICTED: ice nucleation protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988247.1 True 1849 mRNA 0.40 2 89018704 89020600

Neighbor

gene id symbol gene type direction distance location
si:dkey-78p8.1 LOC106577363 coding upstream 434 89007456 ~ 89018305 (+)
LOC110518194 LOC106577299 coding upstream 26244 88981098 ~ 88992460 (+)
LOC118966734 NA coding upstream 188452 88829551 ~ 88830252 (+)
LOC118966059 NA coding upstream 290511 88725598 ~ 88728193 (+)
LOC118966061 NA coding upstream 370901 88551971 ~ 88647803 (+)
LOC110510724 chst3 coding downstream 250208 89270808 ~ 89288624 (+)
LOC110514249 LOC101463634 coding downstream 567765 89588365 ~ 89663139 (+)
LOC118966071 NA coding downstream 636777 89657377 ~ 89659317 (+)
gpx9 LOC106577309 coding downstream 783308 89803908 ~ 89806519 (+)
LOC110531574 LOC106577308 coding downstream 786676 89807276 ~ 89813481 (+)
G98839 NA non-coding upstream 837 89014265 ~ 89017867 (+)
G98814 NA non-coding upstream 40868 88977619 ~ 88977836 (+)
G98808 NA non-coding upstream 54569 88963915 ~ 88964135 (+)
G98805 NA non-coding upstream 57753 88960473 ~ 88960951 (+)
G98837 NA non-coding downstream 358 89020958 ~ 89021592 (+)
G98847 NA non-coding downstream 2194 89022794 ~ 89023079 (+)
G98851 NA non-coding downstream 6207 89026807 ~ 89027094 (+)
G98853 NA non-coding downstream 8538 89029138 ~ 89029739 (+)
G98854 NA non-coding downstream 9426 89030026 ~ 89030264 (+)
LOC118966060 LOC106613898 other upstream 274291 88608182 ~ 88744413 (+)
LOC118966062 NA other upstream 368910 88646294 ~ 88649794 (+)
G98104 NA other upstream 874263 88130944 ~ 88165405 (+)
LOC118966052 LOC106577294 other upstream 1096290 87920968 ~ 87928366 (+)
G99160 NA other downstream 438135 89458735 ~ 89459071 (+)
G99246 NA other downstream 638661 89659261 ~ 89663140 (+)
G99440 NA other downstream 819268 89839868 ~ 89841791 (+)
G99466 NA other downstream 887172 89907772 ~ 89908434 (+)

Expression


Co-expression Network