XLOC_019832 (pcyox1l)


Basic Information

Item Value
gene id XLOC_019832
gene name pcyox1l
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 41597969 ~ 41624697 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039019
ATGTTACCATCCACAGGGCTGAAGTATCGTAAGAGTGTGGCTGGGAAAACAGCAGTGTTCAACGGAGAAGAGTTCATTCTAGAGGAGACAGACTGGTACCTGCTGGATCTGTTTCGCTTGTGGTGGCGCTATGGCATAAGCTTCATCCGTCTGCAGATGTGGGTGGAGGAGATCATGGAGAAGTTTATGAGAATCTATAAATACCAGGCTCACGGCTATGCCTTCAGTTCAGTGGAGGAGTTGCTGCACTCTCTGGGCGGTTCGGGATTCATCAACATGACCCGCCGCTCTCTATCCGAGTCTCTGCTAGAATTGGGCGTCTCTCAGCGCTTCATTGACGAAGTCATTGCCCCCATCATGAGGGTCAACTACGGCCAGAACATCAGCATCCCTGCATTTGTTGGTGCTGTGTCTCTAGCTGGTGCTCAGGCCAATCTCTGGGCCGTGGAAGGAGGAAACAAGCTGGTGTGCTCAGGACTGCTCAAACTGGCCAGAGCAAATCTTATCCAGAGTCCAGTTACAACTGTTACTCTCCGCTCAACAGggGAAGAGCACCAGTATGAGCTCACCTACAGCTCTCAAAGCGAACAGACATCCGAGATCTACGACATCGTAGTAATAGCGACACCGCTCCAACAAAATGTCAACTCTGGCATCTCATTCCAGGGCTTTGAGCCTCAAATTCCAGAAATGGTGGGCTCCTACCACCAAAcggtggcctccatcatccatggCTACCTAAATTGCACCTACTTTGGCTTCCCAGATCCAAAGCTCTTCCCATTTTCAAGCATTCTCACAACCGACACCGAGGAGCTGTTCTTCAACAGCGCCGCCAGCGTCTGTCCCGTCAACATAACCTCCGGTTTCCGCCGAAAGCAGCCTCAGGAGGCGGGAGTTTACAAGGTGTTCTCCCCAAAACCTCTGGAGAAGAGTGAGCTGAAGACCCTTTTTAAGTCCTACTACTCTGTGCAGGTCACCGATTGGATGGCCTACCCTCATTACGGCAGCACTCAAGGCTTGCCGCCAGTTGTGCTGCATGAAAACATGTACTTTCTTAATGGAATCGAGTGGGCAGGGAGTGCCATGGAGATGAGCTCAGTGGCAGCCAAGAATATTGCACTGTTGGCCTACCACCGCTGGAACAGACAGTCGGAGATGATTGACCAGAAGGATCTCATGCACAAAGTCAAGACGGAATTGTGACGCATCcaatttgctatttaaagtaatttttatggATCATGGCCTTAATTTACAACACCCCTAGAGTTTcgtttttaatccattcagccaattttTGTgtcatttagcttagcttagcatagatcattgaattagattagaccattagcatcacgtGCAAATTTTAAAAGagttaattttcttatttaaagtttgactctaCTGTATAcgttgtgtactaagactgacaagACAATGAAGatttgctattttctaggccgatATGGCTAGAAACTGTACTCgtattctggcgtaataatcaaagaACTTTGCTGTCGTACCATGCCTGCaacaggcacaatgatattacgcagATTCTAACTGGTGGTTCAAGTGTAGGGTTTGGTGCTAGGGATTATTTTAAAGCACTGTGTAACATTGCCCctactgcagccatggtacagcagcaaagttccttgattattacgccggaATGAGAGTATAGCTCCTAGACACAACAGTCTGTTGTATGTATGAATCAGTGAAGTCAGTATGAATTAGAAACCCAATTTTCCATctgtcttagtacatgatgtaactacagaagagtcaagctttaaataaagaaattatcataatttttttgaaaattttgagcgagatgctaatagtctaatccgattcaataatctatgctaagctaagctaaaagtgctgaaTATCAGCTGATAACAGTTTAACTCTAGTGTAGTTATAAAATTAGCCTATATTTGAGCAAAAACAGGTCAATAATAAGGAGAATTATGATATATTAAGTGACCATGCATCAAGACTTGCCACATGCATCATGACCAGGATTTATTACCTGCTGAGGCCAGTTTAACCAATAATGTGCAAGCATTGTACACAATCGACCAATCATGGTGTATTTGAAGTTGGGATCTACAGAGAATGTTCAAAATGATGtaaatacatgtgtatatatgaagtgttcagatgcaaaaacctctaaatgccatctgaaatttccatcggaaatgagcatttttctcagactcctgTGTTTATGTTGAGTTTCATTTTAAAAACCTTAAAACGGGTGTATTCTTTGCTAAAAAcctgaaattactgaacctacacacaggagcctgataaaaaaagTTCATGTTTGAAGGAACTTTCAAacggcttttagaggtttttgcatctgaactcttcatatgatAGCTGCATGACTTCAAAGTAGCATGAGAGCAATTTGATAGTATACAGCGCTATATGATGCCTACACCTCTTACAAATGTCATACAGTGATCAGTCTGTACAGTGTAAACAGTCAAAACCTGGACTTTTTAGGGTCTTTATTAGGACAGGACAGTGGCGATAACGGACAGAAAGAATTGGAAGTAGAGTTCAAGCCGGGACTTGAACTCGGGTCACAGTGAGCACATTATTGCTATGTGTCGACACACTGAACCACTTGGCAACACACTCAGAAATGAAGATACATCACTAATGCAGTTAAAAATCTTTTGAAAGctagtacacaatgtaacaacagaagagtcaagctttaaataataaaatgatcaaaacacttttttgaaaattttgagcgagatgctaatggtctaatccgattcaatgatctatgctaagctaaaagtgctcctgccagacctaaagatcagctgaatggattgaaAAATAGTGAAACTCAACTGTTTATCTCTAGGGTAGTTATGAAATGAGCCTATATTCAAAAGAGGTCAATAATAAAGATAATTATGATCTATTAAGTGACCATACTTGCCACATGTGTCATGGACAGGATTTATTACCTGTTGAAGCCAGTTTGATCAATAATGTGCAAGCATTGTACACAATCGACCAATCGTGGTGCATGTGAAGGTGAGATCTACAGAGAACGTTCAAAATGACGTTAATTCATGTATGTATGAAGAGTTcacatgcaaaaacctctaaaggcCATCGAAAATGAGCATGtatatgttgagttatttcattttaaaaacctttagaagagtgtattctttgccataaacttgaaattactgaacctacacacaagaGCCTGACAAAAATGGCCCTTTTTGAAGGCACTTTCAAACgccttttagaggtttttgcatctgaactcttcatatgatAGCTGCATGACTTCAAAGTAGCATGAGAGCGATTTGATAGTATACAGCGCTATATGATGCCTCTTACGAATGTCATATAGTGATCAGTCTGTACAGTGTAAACAGTCAAAACCTGGACTTTTTAGGGTCTTTATGAGGACAGGAGAGTGGAGATTACGAACTGAATGAATTGGAAGTAGCGTGAAAGGgcaaggatcggcaaaggacctcaagccaggacttgaactcgggtcaccgtgagcacaTTATTGCTATGTGTCGGCACACTGAACCACTTGGCAACACACTCAGAAGTAAAGGTACAAAATTTATCACTGATGTAATTCAAAAACTTTCAAAAGCTCCACTTTTGTATCGTACAGGTGGACATTACTTGGTTGAGTTTCCACTTTTGTCTctttaaggtttacttttgttCCTTTATGGTACTATAAggaacacatttgtactttttaggtattaatatgtatcTGTAAAGACCTGCTAGGAACAAAAATGTAATTCCACCCCAGTGACTTTATTTCTGAGCGGCACCGACCAAACCTGGACCTTTTTTGAGCTATATAGAACTCCTGGCCTGGTGGTATCCCATAATATATACCACATATGTTCACAATGATATTAAAGTTTGGACAAAGCCAAAAGTAGTTCTCGTTTCTACACAACATTGCTTCTGTCTTAGTTTTCAGGTCGCTGAAGAGTCTGCCAGATGTTTAGTGAATGTGAACAGCAGTGTGGTCTCAGGCTAAACGCTTGATCTTAATCAGACGGCGGTAATGCGTGGGACGTGTTCTCTATtactgaccaactgaccaaccaacaTCTCTGTGAGCTCATGTTTATCTGTGATGAAGTGACCACGTATGAGAGAGGTGAAAGTTAGCATtgcatttcattgttttttttatgtttgctgATGAAGTCCTAAGTTGTACATGCTATGTATGTGTACTCTTCACTAGGCTAGGAAATGTCTTGGCAGGAAATAatctattattaaaactatttattatggCAGCTTGACTTtctcagtttaataaataatggcGTATGGTGTTCTCAGTAGCTTTCTTTCGTCTGATTTTGCTGAATAAGGATGTACTGTGGTGCATAATTAGTCATAAAGCGGTCAAAGGGGTATCAAGCGTCAAGACTACACACAGATGCGTAAGTGCATTTTTAAACTACAATCTACCtaaaaatgtctg
>TCONS_00039021
GGATAGCATGTAAATATGAACGCGCGTAGGTTTTACTGTTCTGCGGAAGCGAAATTGATTAAAATATTCCGTTATTTTGCTAATTGTTTGCTTCTTTTTTGTTAATCCTACTGGCACAAGTCTAGAAGAAATGCGTCAAGACGCGTGCATAAATTAACGCAACGGTACATTCTATGTTGATTGAATGGAGTCGACTGTTCTAGCGAACATGCGTCGgtgtttattgttagttttttatttagtgcATGTATTGGCGGATACAGATTTTGCCAAATTTGACGGTGCACCGCCTTCTAAAATAGCTGTTGTTGGAGCAGGAATTGGAGGAACCGCTACAGCGCATTTCCTTAGGCAACATTTCGGGCCAGAAGTGAGAATTGATGTGTTTGAAAAGGGGTCAGTCGGTGGTCGTCTGGCTACTGTCACTGTGAACCACCAAGACTACGAGTCCGGTGGATCCATCATCCATTCCCTCAACCTGCACATGCAAGACTTTGTCCAGCAGTTGGGGCTGAAGTATCGTAAGAGTGTGGCTGGGAAAACAGCAGTGTTCAACGGAGAAGAGTTCATTCTAGAGGAGACAGACTGGTACCTGCTGGATCTGTTTCGCTTGTGGTGGCGCTATGGCATAAGCTTCATCCGTCTGCAGATGTGGGTGGAGGAGATCATGGAGAAGTTTATGAGAATCTATAAATACCAGGCTCACGGCTATGCCTTCAGTTCAGTGGAGGAGTTGCTGCACTCTCTGGGCGGTTCGGGATTCATCAACATGACCCGCCGCTCTCTATCCGAGTCTCTGCTAGAATTGGGCGTCTCTC
>TCONS_00039022
ATGCGTCGgtgtttattgttagttttttatttagtgcATGTATTGGCGGATACAGATTTTGCCAAATTTGACGGTGCACCGCCTTCTAAAATAGCTGTTGTTGGAGCAGGAATTGGAGGAACCGCTACAGCGCATTTCCTTAGGCAACATTTCGGGCCAGAAGTGAGAATTGATGTGTTTGAAAAGGGGTCAGTCGGTGGTCGTCTGGCTACTGTCACTGTGAACCACCAAGACTACGAGTCCGGTGGATCCATCATCCATTCCCTCAACCTGCACATGCAAGACTTTGTCCAGCAGTTGGGTCAGTTGCATTCATAA

Function

symbol description
pcyox1l Predicted to enable prenylcysteine oxidase activity. Predicted to be involved in prenylated protein catabolic process. Predicted to act upstream of or within prenylcysteine catabolic process.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000069003

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039019 False 4564 mRNA 0.41 4 41597969 41620419
TCONS_00039021 False 818 mRNA 0.46 4 41616633 41624697
TCONS_00039022 True 318 mRNA 0.47 2 41624082 41624489

Neighbor

gene id symbol gene type direction distance location
XLOC_019831 NA coding downstream 4806 41590870 ~ 41593163 (-)
XLOC_019830 crebrf coding downstream 9840 41557882 ~ 41588129 (-)
XLOC_019829 bnip1b coding downstream 51974 41535954 ~ 41545995 (-)
XLOC_019827 cpeb4b coding downstream 228430 41310551 ~ 41369539 (-)
XLOC_019828 CABZ01034722.1 coding downstream 246304 41351545 ~ 41351665 (-)
XLOC_019834 TCERG1 coding upstream 157610 41782307 ~ 41818359 (-)
XLOC_019835 cct6a coding upstream 194591 41819288 ~ 41839684 (-)
XLOC_019836 endou2 coding upstream 238843 41863540 ~ 41873584 (-)
XLOC_019837 gabrg2 coding upstream 279063 41903760 ~ 42007482 (-)
XLOC_019838 NA coding upstream 419277 42043974 ~ 42048805 (-)
XLOC_019825 CU570984.1 non-coding downstream 346421 41251431 ~ 41251548 (-)
XLOC_019814 NA non-coding downstream 1018162 40528787 ~ 40579807 (-)
XLOC_019802 NA non-coding downstream 1673525 39923770 ~ 39924444 (-)
XLOC_019840 NA non-coding upstream 525663 42150360 ~ 42156252 (-)
XLOC_019849 NA non-coding upstream 1622010 43246707 ~ 43251824 (-)
XLOC_019850 NA non-coding upstream 1700584 43325281 ~ 43325892 (-)
XLOC_019853 AL954767.1 non-coding upstream 1765704 43390401 ~ 43393079 (-)

Expression


Co-expression Network