gpx9 (LOC106577309)


Basic Information

Item Value
gene id gpx9
gene name LOC106577309
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89803908 ~ 89806519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988307.1
TTGACAAGTATGTGCGAtattttggttaaaaaaaaatatacgaCCGAGCGTTAGGATCCAAGTGACATTCGACGCCTGTGGATTTTACCGATACGCACCACCGGTCAATGTCTGTTACACGAGAGGAATATTATCTTTGCTCATGCCGCGACACAATGGAGTCAACCACGCTGAACAACTGCTGAGCCTATAGTTATGGTTCTCTGAATGAGGAGGACCAACCGGGTGGCTTTAGTGAATACCCACCGCAGACTGCTCTGCTCTGGATAAAGGCTACAAGCTAAAGAAGAAGTAGAACCTCTAATGGCGTGCGTTAAATCAATCTATGATTTCAGCGCTGAGACCTTGAACGGTCAGAGCGTTCCTCTCGGTATCTACAGGGGCAAGGTGCTCCTCATTGTCAACCTGGCCACCTTCTGAGGGTCAACGATAGAGGAGTACCACAGAATGAATGCACTCATGGAAATGTTTGGTGACCTCAACTTCACTGTCCTGGGATTCCCCTGCAATCAGTTTGGTCTTCAGGCACCTGAGGTAAATCATGAAACCCTCAACCTTCTCAAGTATGTAAGGCCAGGTGGGGGGTTTGTCCCCAAGTTCCCTGTGTTTGGCAAGATCGAGGTCAATGGGTTGAATGAAGAACCTCTTTTCGCCTATCTCAAGGAGTCTTTGCCCTATGTGAACCCTGTCATAGGAGATATAAAGAAGTTCTACTGGTCACCCATCAAAGTCAACGACATTCGCTGGAACTTTGAGAAGTTTCTAATCGATTCTGATGGGGCGCCTTTCAGGCGTTATGAACTTCATGGCCCTACTGAGAAAGTGGAAAAAGACATTGCAGGCCTACTATAAATGGAGTCATCTGTTCCCTTTATGGCTGTCAAGAAAGTGGGTCCTTCATCAGCAGAGGCAGAGTGACGATCCCTCAGTAAATGCAGACTAAATGCAGCTGAGCTGGATCTgatggagaagggagaaggaCTCTGAGTTTCAGTGCATTCACTCAGAATATTAGATCCCTCCAGCCCCTGTTGGTGACCAGTAGGCATATCACTATGGTCTCAATATAACTAACTACTCCCTTTTGTTATTGTTGCAAAACAGAGGAAGTCAATAAATCTTTTGGCTGAAATCTTA

Function

NR:

description
LOW QUALITY PROTEIN: glutathione peroxidase 6-like

GO:

id name namespace
GO:0006979 response to oxidative stress biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004602 glutathione peroxidase activity molecular_function

KEGG:

id description
K00432 gpx, btuE, bsaA; glutathione peroxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988307.1 True 1137 mRNA 0.46 6 89803908 89806519

Neighbor

gene id symbol gene type direction distance location
LOC110514249 LOC101463634 coding upstream 140769 89588365 ~ 89663139 (+)
LOC118966071 NA coding upstream 144591 89657377 ~ 89659317 (+)
LOC110510724 chst3 coding upstream 515284 89270808 ~ 89288624 (+)
LOC118966069 NA coding upstream 783308 89018704 ~ 89020600 (+)
si:dkey-78p8.1 LOC106577363 coding upstream 785638 89007456 ~ 89018305 (+)
LOC110531574 LOC106577308 coding downstream 757 89807276 ~ 89813481 (+)
LOC118936687 LOC106577393 coding downstream 13856 89820375 ~ 89845196 (+)
LOC118966074 NA coding downstream 28760 89835279 ~ 89837227 (+)
LOC110531805 LOC106597856 coding downstream 41107 89847512 ~ 89873986 (+)
LOC110510825 djb12 coding downstream 76520 89883039 ~ 89899450 (+)
G99416 NA non-coding upstream 10845 89790845 ~ 89793063 (+)
G99414 NA non-coding upstream 24151 89777467 ~ 89779757 (+)
G99327 NA non-coding upstream 127229 89674050 ~ 89676679 (+)
G99322 NA non-coding upstream 134674 89668856 ~ 89669234 (+)
G99246 NA non-coding upstream 140768 89659261 ~ 89663140 (+)
G99436 NA non-coding downstream 21147 89827666 ~ 89828443 (+)
G99453 NA non-coding downstream 59969 89866488 ~ 89867732 (+)
G99430 NA non-coding downstream 68453 89874972 ~ 89879926 (+)
G99463 NA non-coding downstream 96679 89903198 ~ 89904294 (+)
G99160 NA other upstream 344837 89458735 ~ 89459071 (+)
LOC118966060 LOC106613898 other upstream 1059495 88608182 ~ 88744413 (+)
G99440 NA other downstream 33349 89839868 ~ 89841791 (+)
G99466 NA other downstream 101253 89907772 ~ 89908434 (+)
G99470 NA other downstream 108561 89915080 ~ 89918120 (+)
G99484 NA other downstream 142920 89949439 ~ 89950884 (+)
G99486 NA other downstream 148507 89955026 ~ 89955619 (+)

Expression


Co-expression Network