LOC110531574 (LOC106577308)


Basic Information

Item Value
gene id LOC110531574
gene name LOC106577308
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 89807276 ~ 89813481 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036988305.1
caaatcccaaagaagaagcgaagagaagaaaaaaataaaaaaaaaatttccCGAAGTTGTCACCGGACGCATGCGTATTTCACTGTTCAATGTCACAGCAACAATTGAACATGGCTGCCGTGGGTTTCAGAAATTGGGCTCGAGCTCTTTCCAGGGGGAAACAGCCAGGCTTCTCGGCGCTTTTCTCCCAAATCAGAGCAGCCTCTGGACCTTCCAAGGGCATGCTGCCAGGGCCATACCCCCAAACGCCCGAGGAGAGAGCAGCTGCAGCGAAGAAGTACAACATGAGGGTGGAGGATTATGAACCAATCCCGGATAATGGCGAGGGGTATGGAGACTACCCACAATTGCCAGACAGATCCCAGCATGAGAGAGACCCCTGGTATTCCTGGGACCATCCAGACCTGAGGAGGAACTGGGGGGAGCCGATCCACTGGGATTTTGACATGTTCATCAGGAATCGAGTGGACACGTCGCCCAGCCCTGTGGCCTGGCACACCATGTGCAAACATCTGTTTGGTTTCGTTGGATTCATGCTGCTGATGTTCTACCTTGGGGAGAAGTTTCCATCTTACCAGCCGGTGGCACCCAAACAATATCCTTACAGCAACCTGcacctagagagaggagaggatcccGAGAAACAACCTGAAGAAGTCAAACATTTTAACATTTAAATATCTGCTTCTCTAAATGTGTATATTTCTGTCTAATAAAGAGTTATTAGTGTGACTTCAGTCACATTCCTTGA

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

GO: NA

KEGG:

id description
K03964 NDUFB8; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036988305.1 True 751 mRNA 0.49 5 89807276 89813481

Neighbor

gene id symbol gene type direction distance location
gpx9 LOC106577309 coding upstream 757 89803908 ~ 89806519 (+)
LOC110514249 LOC101463634 coding upstream 144137 89588365 ~ 89663139 (+)
LOC118966071 NA coding upstream 147959 89657377 ~ 89659317 (+)
LOC110510724 chst3 coding upstream 518652 89270808 ~ 89288624 (+)
LOC118966069 NA coding upstream 786676 89018704 ~ 89020600 (+)
LOC118936687 LOC106577393 coding downstream 6894 89820375 ~ 89845196 (+)
LOC118966074 NA coding downstream 21798 89835279 ~ 89837227 (+)
LOC110531805 LOC106597856 coding downstream 34145 89847512 ~ 89873986 (+)
LOC110510825 djb12 coding downstream 69558 89883039 ~ 89899450 (+)
LOC110489354 LOC106592879 coding downstream 106980 89920461 ~ 89970659 (+)
G99416 NA non-coding upstream 14213 89790845 ~ 89793063 (+)
G99414 NA non-coding upstream 27519 89777467 ~ 89779757 (+)
G99327 NA non-coding upstream 130597 89674050 ~ 89676679 (+)
G99322 NA non-coding upstream 138042 89668856 ~ 89669234 (+)
G99246 NA non-coding upstream 144136 89659261 ~ 89663140 (+)
G99436 NA non-coding downstream 14185 89827666 ~ 89828443 (+)
G99453 NA non-coding downstream 53007 89866488 ~ 89867732 (+)
G99430 NA non-coding downstream 61491 89874972 ~ 89879926 (+)
G99463 NA non-coding downstream 89717 89903198 ~ 89904294 (+)
G99160 NA other upstream 348205 89458735 ~ 89459071 (+)
LOC118966062 NA other upstream 1157482 88646294 ~ 88649794 (+)
LOC118966061 NA other upstream 1163825 88551971 ~ 88647803 (+)
G99440 NA other downstream 26387 89839868 ~ 89841791 (+)
G99466 NA other downstream 94291 89907772 ~ 89908434 (+)
G99470 NA other downstream 101599 89915080 ~ 89918120 (+)
G99484 NA other downstream 135958 89949439 ~ 89950884 (+)
G99486 NA other downstream 141545 89955026 ~ 89955619 (+)

Expression


Co-expression Network