LOC118966739 (LOC106577420)


Basic Information

Item Value
gene id LOC118966739
gene name LOC106577420
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90746652 ~ 90748391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036990078.1
ccaaGAAGAAGGAGTTGGAGGAGAAGATGGTGGCCATGGTGCAGGAGAAGAATGACCTGGCGCTTCAAGTCGCATCTGATTCAGAGAATCTGAACGATGCTGAGGAAAGGTGTGAGGGGCTCATCAAGAGCAAGATCCAGCTGGAGGCCAAACTCAAAGAGACGACTGAGaggctggaggatgaggaggagatgaaTGCTGAGTTGACTGCCAAGAAGAGGAAGCTGGAGGATGAGTGTTCTGAGCTGAAGAAGGACATTGATGACCTGGAGCTCACCTTGGCCAAAGTGGAGAAGGAGAAGCACGCCACTGAAAACAAGGTTAAAAAGCTGACAGAGGAGATGGCGTCTATGGATGAGAGTGTTGCCAAGCTGACCAAGGAGAAGAAAGTCCTCCAAGAGGACCACCAGCAGACACTGGACGACCTGCAGgctaaatatacagtacatgctaTTATTATGTAG

Function

NR:

description
myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036990078.1 True 464 mRNA 0.50 3 90746652 90748391

Neighbor

gene id symbol gene type direction distance location
LOC118966738 LOC106594844 coding downstream 46 90745393 ~ 90746606 (-)
LOC118966737 LOC106577420 coding downstream 49717 90695281 ~ 90696935 (-)
LOC118966736 LOC106585883 coding downstream 51419 90693579 ~ 90695233 (-)
LOC118966735 LOC106564289 coding downstream 89633 90645978 ~ 90657019 (-)
LOC110531748 polr3a coding downstream 143878 90548240 ~ 90602774 (-)
LOC110513773 LOC107083051 coding upstream 54933 90803324 ~ 90813931 (-)
LOC118936689 dpysl4 coding upstream 171604 90919995 ~ 90970591 (-)
LOC110516041 jakmip3 coding upstream 234876 90982735 ~ 91072716 (-)
LOC110531579 LOC106577354 coding upstream 342020 91090411 ~ 91119379 (-)
LOC118966091 tcerg1l coding upstream 568777 91317168 ~ 91530447 (-)
G100198 NA non-coding downstream 5529 90637738 ~ 90741123 (-)
G100205 NA non-coding downstream 57181 90638401 ~ 90689471 (-)
G100216 NA non-coding downstream 164428 90581994 ~ 90582224 (-)
G100215 NA non-coding downstream 165266 90581164 ~ 90581386 (-)
G100207 NA non-coding downstream 170400 90575532 ~ 90576252 (-)
G100204 NA non-coding upstream 2755 90751146 ~ 90772190 (-)
G100271 NA non-coding upstream 119099 90867490 ~ 90867760 (-)
G100278 LOC106592262 non-coding upstream 136425 90884816 ~ 90890245 (-)
G100282 NA non-coding upstream 147296 90895687 ~ 90898053 (-)
G100288 NA non-coding upstream 160098 90908489 ~ 90909346 (-)
G99602 NA other downstream 782447 89963873 ~ 89964205 (-)
G99595 NA other downstream 788736 89957392 ~ 89957916 (-)
G99035 NA other downstream 1456596 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 1494564 89223150 ~ 89270371 (-)
G98878 NA other downstream 1670414 89075847 ~ 89076238 (-)
G100582 NA other upstream 484349 91232740 ~ 91233788 (-)
LOC110531398 glrx3 other upstream 1044188 91791792 ~ 91832379 (-)
G102060 NA other upstream 1843190 92591581 ~ 92595514 (-)
G102083 NA other upstream 1888907 92637298 ~ 92638881 (-)

Expression


Co-expression Network