LOC110513773 (LOC107083051)


Basic Information

Item Value
gene id LOC110513773
gene name LOC107083051
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90803324 ~ 90813931 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036990082.1
ATGAGCATCTACAAGCTGACAGGAGCTGTACTGCACCATGGCAACTTGAAATTCAAGCAGAAGCGGCATGAGGAGCAGGCCGAGCCAGACGGCACAGAGGTGGCTGATAAAATCGGCTACCTGCTGGTCCTGAACTCAGCTGAGATGCTGAAGGCTCTGTGCTACCCCAGAGTGAAGGTCGGCAACGAGTGTGTGACCAAGGGACAGACTGTGCCTCAGGTTAATAACTCAGTCTCGGCTCTGGCCAAGTCCATCTACGAGAGGATGTTCCTGTGGATGGTCGTCCGTATCAATGAGATGTTGGATACCAAGAATCCAGGGCAGTTCTACATTGGTGTGCTCGACATTGCCGGGTTTGAGATCTTTGACtttttcaaccacaccacgTTCGTCCTGGAACAAGAGGAGTACAAGAAGGAGGGAATCGTCTGGGCCTTCATTGACTTCGGCATGGACTTGGCTGCCTGCATTGAGCTTATTGAGAAGCCATTGGGCATATTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCTTCAGCCACTTCCTTCAAGGACAAGCTGTACTCCCAGCATCTTGGCAAAACCAAGGCGTTTGAGAAGCCCAAGCCAGCCAAAGGCAAGGCAGAGGCCCACTTCTCCCTGGTGCACTACGCTGGCACTTTGGACTACAACATAACTGGCTGGCTGGAGAAGAACAAGGACCCCCTGAACGACTCAGTTCTTCAGCTGTACGGGAAGTCTTCAGTCAAACTGATGGCGATCCTGTATGTCGCTGCCCCACCTGAGGATACAACCAAGAAAGGAGGCAAGAAGAAGGGTGGTTCCATGCAGACTGTGTCCTCCCAGTCCAGGGAGAACTTACATAAGCTGATGACCAACTTGAGGAGCACTCATCCTCACTTTGTACGCTGCCTGATCCCCAACGAGTCAAAGACTCCAGGTCTAATGGAGAACTTCCTGGTTATCCACCAGCTCAGGTGTAATGGTGTTCTGGAGGGGATCAGGATCTGCaggaagggcttccccagtagaATCATCTATGCTGACTTCAagcagagGTACAAAGTACTGAATGCCAGTGTCATCCCCGAGGGCCAGTTCATGGACAACAAGAAGGCTTCTGAGAAGCTGCTTGGgtccattgatgtgaatcacgaggactacaagtttggacacaccaagGTGTTCTTCAAAGCCGGTCTGCTGGGTgtcctggaggagatgagagatgagaagcTGGCCTCTCTGGTCGGCATGGTCCAGGCTCTCAGCCGTGGATTCCTCATGAGGAGAGAGTTCACcaagatgatggagaggagAGATTCCGTCTTCACCATCCAGTACAACATCCGTTCATTCATGAATGTGAAAACCTGGCCATGGATGAAGTTGTACTTCAAGATCAAGCCCCTGCTGCAGAGCGCTGAGACTGAGAAGGAGCTGGCCAACATGAAGGAGAACTATGAGAAGATGACGTCGGACTTGGCCAAGGGTCTGGCCAAGAAGAAGGAGTTGGAGGAGAAGATGGTGGCCATGGTGCAGGAGAAGAATGACCTGGCGCTTCAAGTCGCATCTGATTCAGAGAATCTGAACGATGCGGAAAGGTGCGAGGGGCTCATCAAGAGCAAGATCCAGCTGGAGGCCAAACTCAAAGAGACGACTGAGaggctggaggatgaggaggagatgaaTGCTGAGTTGACTGCCAAGAAGAGGAAGCTGGAGGACGagtgctctgagctgaagaaggaCATTGATGACCTGGAGCTCACCTTGGCCAAAGTGGAGAAGGAGAAGCACGCCACTGAAAACAAGGTTAAAAACCTGACAGAGGAGATGGCGTCTATGGATGAGAGTGTTGCCAAGCTGACCAAGGAGAAGAAAGCCCTCCAAGAGGCCCACCAGCAGACACTGGACgacctgcaggcagaggaggacaAAGTCAACACTCTGACCAAGGCCAAGACCAAGCTGGAACAGCAAGAGGACGACGCCCGTattgaggagctggaggaggaaatTGAGGCTGAGCGTGCTGCCAGGGCCAAGGTTGAGAAGCAGAGGGCCGATCTCTCCAGGGAACTTGAGGAGATCAGCGAGAGACTGGAGGAAGCCGGAGGCGCCACTGCTGCTCAGATTGAGATGAACAAGAAGCGCGAGGCTGAGTTCCAGAAGCTGCGTCGTGATCTTGAAGAGTCCACCCTGCAGCATGAGGCCACAGCCAACCTGCAGCGCGTCAAGCagaagctggagaaggagaagagcgaGTACAAGATGGAGATTGATGACCTCTCCAACAACATGGAGGCTGTCGCCAAGACTAAGGGCAATCTGGAGAAGATGTGCCGTACTCTTGAGGACCAGCTGAGCGAGCTCAAGACTAAGAATGATGAGAATGCTCGCCAGGTCAACAACATCAGCGGACAGAGGGCCAGACTCCTGACAGAAAATGGTGAGTTTGGCCgccagctggaggagaaggaaGCCCTGGTGTCTCAGCTGACCAGAGGCAAACAGGCCTTCACCCagcaggtggaggagctgaagagaCTGATTGAGGAGGAGGTCAAGgctaAAAACGCACTGGCCCATGGTGTCCAGTCTGCCCGCCATGACTGTGATCTCCTGAGAGAGCAGtttgaggaggagcaggaggccaAGGCAGAGCTGCAGCGCGGCATGTCCAAGGCCAACAGTGAGGTGGCTCAGTGGAGGACTAAGTATGAAACTGATGCCATCCAACGcacagaggagctggaggaggccaAGAAGAAGCTGGCCCAGCGTCTGCAGGAGGCTGAGGAGACCATTGAGGCGACCAACTCAAAGTGTGCCTCCCTGGAGAAGACCAAGCAGAGActgcagggagaggtggaggacctCATGATATACGTTGAGGGAGCCAACGCCATGGCCGCCAACCAATATTTGAAACTGGCAGACCAGTTGTATAAGTGA

Function

NR:

description
myosin-8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036990082.1 True 2961 mRNA 0.54 19 90803324 90813931

Neighbor

gene id symbol gene type direction distance location
LOC118966739 LOC106577420 coding downstream 54933 90746652 ~ 90748391 (-)
LOC118966738 LOC106594844 coding downstream 56718 90745393 ~ 90746606 (-)
LOC118966737 LOC106577420 coding downstream 106389 90695281 ~ 90696935 (-)
LOC118966736 LOC106585883 coding downstream 108091 90693579 ~ 90695233 (-)
LOC118966735 LOC106564289 coding downstream 146305 90645978 ~ 90657019 (-)
LOC118936689 dpysl4 coding upstream 106064 90919995 ~ 90970591 (-)
LOC110516041 jakmip3 coding upstream 169336 90982735 ~ 91072716 (-)
LOC110531579 LOC106577354 coding upstream 276480 91090411 ~ 91119379 (-)
LOC118966091 tcerg1l coding upstream 503237 91317168 ~ 91530447 (-)
LOC110531398 glrx3 coding upstream 979687 91791792 ~ 91832379 (-)
G100201 NA non-coding downstream 5113 90741415 ~ 90798211 (-)
G100197 NA non-coding downstream 7017 90625080 ~ 90858972 (-)
G100202 NA non-coding downstream 22615 90736226 ~ 90780709 (-)
G100199 NA non-coding downstream 26630 90624588 ~ 90776694 (-)
G100204 NA non-coding downstream 31134 90751146 ~ 90772190 (-)
G100271 NA non-coding upstream 53559 90867490 ~ 90867760 (-)
G100278 LOC106592262 non-coding upstream 70885 90884816 ~ 90890245 (-)
G100282 NA non-coding upstream 81756 90895687 ~ 90898053 (-)
G100288 NA non-coding upstream 94558 90908489 ~ 90909346 (-)
G100291 LOC106577418 non-coding upstream 97020 90910951 ~ 90911887 (-)
G99602 NA other downstream 839119 89963873 ~ 89964205 (-)
G99595 NA other downstream 845408 89957392 ~ 89957916 (-)
G99035 NA other downstream 1513268 89287214 ~ 89290056 (-)
ghitm LOC100136239 other downstream 1551236 89223150 ~ 89270371 (-)
G98878 NA other downstream 1727086 89075847 ~ 89076238 (-)
G100582 NA other upstream 418809 91232740 ~ 91233788 (-)
G102060 NA other upstream 1777650 92591581 ~ 92595514 (-)
G102083 NA other upstream 1823367 92637298 ~ 92638881 (-)

Expression


Co-expression Network