Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110516041 |
| gene name | jakmip3 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 90982735 ~ 91072716 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| jakmip3 | Predicted to enable kinase binding activity and microtubule binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human JAKMIP3 (Janus kinase and microtubule interacting protein 3). |
| description |
|---|
| PREDICTED: basic salivary proline-rich protein 1-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036988630.1 | False | 5096 | mRNA | 0.48 | 23 | 90983267 | 91072716 |
| XM_036988631.1 | False | 5090 | mRNA | 0.48 | 23 | 90983267 | 91072716 |
| XM_036988636.1 | False | 5090 | mRNA | 0.48 | 23 | 90983267 | 91072716 |
| XM_036988637.1 | False | 5127 | mRNA | 0.48 | 23 | 90983267 | 91072716 |
| XM_036988640.1 | False | 5121 | mRNA | 0.48 | 23 | 90983267 | 91072716 |
| XM_036988643.1 | False | 4877 | mRNA | 0.48 | 22 | 90983267 | 91072716 |
| XM_036988645.1 | False | 4871 | mRNA | 0.48 | 22 | 90983267 | 91072716 |
| XM_036988648.1 | False | 4902 | mRNA | 0.47 | 22 | 90983267 | 91072716 |
| TU111641 | True | 2378 | TUCP | 0.43 | 2 | 90982735 | 90985169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936689 | dpysl4 | coding | downstream | 12676 | 90919995 ~ 90970591 (-) |
| LOC110513773 | LOC107083051 | coding | downstream | 169336 | 90803324 ~ 90813931 (-) |
| LOC118966739 | LOC106577420 | coding | downstream | 234876 | 90746652 ~ 90748391 (-) |
| LOC118966738 | LOC106594844 | coding | downstream | 236661 | 90745393 ~ 90746606 (-) |
| LOC118966737 | LOC106577420 | coding | downstream | 286332 | 90695281 ~ 90696935 (-) |
| LOC110531579 | LOC106577354 | coding | upstream | 17695 | 91090411 ~ 91119379 (-) |
| LOC118966091 | tcerg1l | coding | upstream | 244452 | 91317168 ~ 91530447 (-) |
| LOC110531398 | glrx3 | coding | upstream | 720902 | 91791792 ~ 91832379 (-) |
| LOC118966740 | NA | coding | upstream | 1471173 | 92543889 ~ 92544887 (-) |
| LOC118966741 | NA | coding | upstream | 1544340 | 92617056 ~ 92622002 (-) |
| G100396 | NA | non-coding | downstream | 15114 | 90967654 ~ 90968153 (-) |
| G100391 | NA | non-coding | downstream | 43863 | 90938726 ~ 90939404 (-) |
| G100384 | NA | non-coding | downstream | 63413 | 90919564 ~ 90919854 (-) |
| G100296 | NA | non-coding | downstream | 64576 | 90918415 ~ 90918691 (-) |
| G100291 | LOC106577418 | non-coding | downstream | 71380 | 90910951 ~ 90911887 (-) |
| G100415 | NA | non-coding | upstream | 13174 | 91085890 ~ 91086540 (-) |
| G100416 | NA | non-coding | upstream | 14140 | 91086856 ~ 91087762 (-) |
| G100441 | NA | non-coding | upstream | 15089 | 91087805 ~ 91088104 (-) |
| G100442 | NA | non-coding | upstream | 15994 | 91088710 ~ 91089089 (-) |
| G100443 | NA | non-coding | upstream | 20986 | 91093702 ~ 91094427 (-) |
| G100197 | NA | other | downstream | 124295 | 90625080 ~ 90858972 (-) |
| G99602 | NA | other | downstream | 1019062 | 89963873 ~ 89964205 (-) |
| G99595 | NA | other | downstream | 1025351 | 89957392 ~ 89957916 (-) |
| G99035 | NA | other | downstream | 1693211 | 89287214 ~ 89290056 (-) |
| ghitm | LOC100136239 | other | downstream | 1731179 | 89223150 ~ 89270371 (-) |
| G100582 | NA | other | upstream | 160024 | 91232740 ~ 91233788 (-) |
| G102060 | NA | other | upstream | 1518865 | 92591581 ~ 92595514 (-) |
| G102083 | NA | other | upstream | 1564582 | 92637298 ~ 92638881 (-) |
| G102119 | NA | other | upstream | 1666297 | 92739013 ~ 92739530 (-) |
| G100400 | NA | non-coding | upstream | 7967 | 90993136 ~ 90993693 (-) |
| G100403 | NA | non-coding | upstream | 15240 | 91000409 ~ 91007906 (-) |
| G100426 | NA | non-coding | upstream | 61799 | 91046968 ~ 91047820 (-) |
| G100430 | NA | non-coding | upstream | 67535 | 91052704 ~ 91053040 (-) |
| G100431 | NA | non-coding | upstream | 74146 | 91059315 ~ 91061984 (-) |
