Item | Value |
---|---|
gene id | LOC118966091 |
gene name | tcerg1l |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 91317168 ~ 91530447 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
tcerg1l | Predicted to enable RNA polymerase binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in nucleus. |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036988676.1 | False | 4252 | mRNA | 0.48 | 14 | 91317168 | 91530446 |
XM_036988681.1 | False | 4309 | mRNA | 0.48 | 15 | 91317168 | 91530446 |
XM_036988689.1 | False | 4247 | mRNA | 0.48 | 14 | 91317168 | 91530446 |
XM_036988692.1 | False | 4250 | mRNA | 0.48 | 14 | 91317168 | 91530447 |
TU112111 | False | 419 | lncRNA | 0.48 | 2 | 91527845 | 91530020 |
TU112112 | True | 623 | lncRNA | 0.48 | 2 | 91527845 | 91530224 |
91,200,000
91,240,000
91,280,000
91,320,000
91,360,000
91,400,000
91,440,000
91,480,000
91,520,000
91,560,000
91,600,000
NC_048565.1
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110531579 | LOC106577354 | coding | downstream | 197789 | 91090411 ~ 91119379 (-) |
LOC110516041 | jakmip3 | coding | downstream | 244452 | 90982735 ~ 91072716 (-) |
LOC118936689 | dpysl4 | coding | downstream | 346577 | 90919995 ~ 90970591 (-) |
LOC110513773 | LOC107083051 | coding | downstream | 503237 | 90803324 ~ 90813931 (-) |
LOC118966739 | LOC106577420 | coding | downstream | 568777 | 90746652 ~ 90748391 (-) |
LOC110531398 | glrx3 | coding | upstream | 263171 | 91791792 ~ 91832379 (-) |
LOC118966740 | NA | coding | upstream | 1013442 | 92543889 ~ 92544887 (-) |
LOC118966741 | NA | coding | upstream | 1086609 | 92617056 ~ 92622002 (-) |
LOC118966742 | NA | coding | upstream | 1317017 | 92847464 ~ 92848944 (-) |
LOC118966095 | NA | coding | upstream | 1318593 | 92849040 ~ 92850460 (-) |
G100611 | NA | non-coding | downstream | 29402 | 91287029 ~ 91287766 (-) |
G100462 | NA | non-coding | downstream | 189874 | 91126870 ~ 91127294 (-) |
G100457 | NA | non-coding | downstream | 194892 | 91122043 ~ 91122276 (-) |
G100450 | NA | non-coding | downstream | 203883 | 91112844 ~ 91113285 (-) |
G100448 | NA | non-coding | downstream | 206349 | 91109309 ~ 91110819 (-) |
G100860 | NA | non-coding | upstream | 31969 | 91562416 ~ 91562787 (-) |
G100884 | NA | non-coding | upstream | 53021 | 91583468 ~ 91583738 (-) |
G100890 | NA | non-coding | upstream | 63625 | 91594072 ~ 91594367 (-) |
G100899 | NA | non-coding | upstream | 69438 | 91599885 ~ 91600129 (-) |
G100901 | NA | non-coding | upstream | 80707 | 91611154 ~ 91611575 (-) |
G100582 | NA | other | downstream | 83380 | 91232740 ~ 91233788 (-) |
G100197 | NA | other | downstream | 458196 | 90625080 ~ 90858972 (-) |
G99602 | NA | other | downstream | 1352963 | 89963873 ~ 89964205 (-) |
G99595 | NA | other | downstream | 1359252 | 89957392 ~ 89957916 (-) |
G102060 | NA | other | upstream | 1061134 | 92591581 ~ 92595514 (-) |
G102083 | NA | other | upstream | 1106851 | 92637298 ~ 92638881 (-) |
G102119 | NA | other | upstream | 1208566 | 92739013 ~ 92739530 (-) |
G102158 | NA | other | upstream | 1343122 | 92873569 ~ 92874498 (-) |
G100784 | NA | non-coding | downstream | 118469 | 91408614 ~ 91409376 (-) |
G100781 | NA | non-coding | downstream | 126193 | 91401014 ~ 91401652 (-) |
G100777 | NA | non-coding | downstream | 147909 | 91379032 ~ 91379936 (-) |