LOC110531613 (LOC106577355)


Basic Information

Item Value
gene id LOC110531613
gene name LOC106577355
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 91877562 ~ 91884380 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614909.2
GCTCCCGGGAAAGGTTCCACTCCTCGGGGATAGAGGGTTGAGTTTTGTATGCTTCCATCCCATTCTGCAAGACGCTAAAGGCCTCTCATCAACCTCTCCTGTGTCCAGGAACACCTCCATAGTAATCATTTCGTTTATTTTGTCTTCTGGAGCTGGAGCGCATTGCCAGAAGTGGTCGATTCAACTgaagcttttttgttgttgttgtaaatgcTTGTTGTAATGATGACTCCAGCTTGAGGAGCCATCaccaaaaacaaaaaaagtttTCTTCAAACGCATTTCGAATAAAAAATAGAATAAAACAGAAGCAACTACAACCATATCCTGCTATTTGAACGACTTCTTCAACGACTAGGATCACGTCCCAACCAGCTACCGAGATAGACTACAGTAACCCACTCTGTGAATTGTTCATGTCGTGCCAACACAGGACGGGCTCAAGGAGACAGGACTTGTGAACTCAACTGGGACTTTTGTTTCGTTCTACACGTTTTAACTACAACAAACTTATTTTACTGTTATTTGTTCAACCACCAAGAAGGAAAGATTGCTCTTCAACAACTACCTTCCTATTATTCTCATTTGGCTGGAGCGGGTTTGTACGAAACTGTTTTAATGTTTGGAATTCAGGAAAATATAGGCTTACCTAGAGGGGGGACGACTATGAAAGAGGAACCGCTGGGCAGCGGGATGAACTCGGTCCGCTCGTGGATGCACACATCTGGGGTAGTGGATGCGAACACAGCCGCCCAAAGCGGTGTGGGTTTGGCTCGGGCACACTACGAGAAGCAACCACCGTCCAACCTCAGAAAATCCAACTTTTTCCACTTCGTTCTTGCGCTGTATGACAGACAAGGACAGCCGGTGGAGATCGAACGGACAGCTTATGTGGACTTTGTGGAGAAGGACAAAGAACCAAACAGTGAAAAAACTAACAATGGGATACACTACAAACTACAGTTACTGTACAGCAACGgtgtcagaacagaacaggatcTTTTCGTACGATTAATCGATTCCATGACAAAACAGGCTATTATCTATGAAGGTCAAGACAAAAACCCAGAGATGTGCCGAGTGCTTCTCACACACGAAATCATGTGCAGTCGGTGTTGTGATAAGAAGAGTTGTGGCAACAGGAACGAGACTCCTTCAGACCCCGTTATCATCGACAGGTAAGAAACAGACCCGCTGTTCGGTACAGATCTTTTCTCTACTCTGGTTTAGTCG

Function

NR:

description
transcription factor COE3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614909.2 True 1233 mRNA 0.45 6 91877562 91884380

Neighbor

gene id symbol gene type direction distance location
LOC118966092 NA coding upstream 40349 91833232 ~ 91837213 (+)
LOC110531588 LOC106560822 coding upstream 790970 91076855 ~ 91086592 (+)
LOC110531853 LOC106577418 coding upstream 965705 90903245 ~ 90911857 (+)
LOC110531710 LOC106592262 coding upstream 981478 90870561 ~ 90896084 (+)
LOC110518968 LOC106564289 coding upstream 1013010 90844513 ~ 90864552 (+)
LOC110522569 LOC106613918 coding downstream 128372 92012752 ~ 92084472 (+)
LOC118964553 NA coding downstream 475618 92359998 ~ 92362861 (+)
LOC110533005 clrn3 coding downstream 1143199 93027579 ~ 93034467 (+)
LOC118966102 NA coding downstream 1161646 93046026 ~ 93047232 (+)
LOC110501964 LOC106589166 coding downstream 1537400 93421780 ~ 93475392 (+)
G101092 NA non-coding upstream 7126 91869886 ~ 91870436 (+)
G101077 NA non-coding upstream 30348 91846992 ~ 91847214 (+)
G101073 NA non-coding upstream 33434 91843808 ~ 91844128 (+)
G101019 NA non-coding upstream 45686 91831603 ~ 91831876 (+)
G101107 NA non-coding downstream 7082 91891462 ~ 91970228 (+)
G101116 NA non-coding downstream 26427 91910807 ~ 91913428 (+)
G101121 NA non-coding downstream 41980 91926360 ~ 91927102 (+)
G101196 NA non-coding downstream 93671 91978051 ~ 91978285 (+)
G101203 NA non-coding downstream 99754 91984134 ~ 91984369 (+)
G100377 NA other upstream 766700 91109249 ~ 91110862 (+)
G100371 NA other upstream 794841 91080666 ~ 91082721 (+)
G99880 NA other upstream 1075233 90643871 ~ 90802329 (+)
G101557 NA other downstream 642639 92527019 ~ 92531819 (+)
G101642 LOC106594265 other downstream 983296 92867676 ~ 92872700 (+)
G101737 NA other downstream 1131542 93015922 ~ 93016762 (+)
LOC110511695 LOC106577385 other downstream 1861670 93722388 ~ 93770095 (+)
G102505 NA other downstream 1948744 93833124 ~ 93835192 (+)

Expression


Co-expression Network