LOC118964553


Basic Information

Item Value
gene id LOC118964553
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92359998 ~ 92362861 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051632.1
gttcctgttcccgtTTCTGTTCCCgtttctgttcctgtccctgtacctgttcctgttcctgttcctgttccaccATGGAGTTGGCTCCTTCAGATCTGTCTGGATCGCAAACCTTCCCTCGACTCAGTGGGCTTCACAACTTCGTATAAGGAAATATCAGGGCCTGTTGAGTTCTGTGGAAAGTACAAAGTTCAGGGTGACACGTTGCCAAATCAAACGTGCGAGTGTTGCTGTAATGGACGATAATAGATGAATGGACAGACAGAACCAGACTCGGGCCTGACGGAGCTGTTTAACCCCCAGCGCTCTTCAATTTACCAGGACAAGCACCTTGAGCTCCGGCACCGCGTCGACACGAAACGCCGTGGAAGGCACGGCAGGGGGTTGCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051632.1 True 391 mRNA 0.53 3 92359998 92362861

Neighbor

gene id symbol gene type direction distance location
LOC110522569 LOC106613918 coding upstream 277014 92012752 ~ 92084472 (+)
LOC110531613 LOC106577355 coding upstream 475618 91877562 ~ 91884380 (+)
LOC118966092 NA coding upstream 522785 91833232 ~ 91837213 (+)
LOC110531588 LOC106560822 coding upstream 1273406 91076855 ~ 91086592 (+)
LOC110531853 LOC106577418 coding upstream 1448141 90903245 ~ 90911857 (+)
LOC110533005 clrn3 coding downstream 664718 93027579 ~ 93034467 (+)
LOC118966102 NA coding downstream 683165 93046026 ~ 93047232 (+)
LOC110501964 LOC106589166 coding downstream 1058919 93421780 ~ 93475392 (+)
LOC110511695 LOC106577385 coding downstream 1359527 93722388 ~ 93770095 (+)
LOC110517068 LOC106577343 coding downstream 1418618 93781479 ~ 94002963 (+)
G101440 NA non-coding upstream 12931 92346763 ~ 92347067 (+)
G101431 NA non-coding upstream 21417 92338312 ~ 92338581 (+)
G101427 NA non-coding upstream 31915 92327406 ~ 92328083 (+)
G101412 NA non-coding upstream 47026 92312197 ~ 92312972 (+)
G101407 NA non-coding upstream 63461 92296085 ~ 92296537 (+)
G101467 NA non-coding downstream 8627 92371488 ~ 92376276 (+)
G101474 NA non-coding downstream 19058 92381919 ~ 92382285 (+)
G101492 NA non-coding downstream 37116 92399977 ~ 92400183 (+)
G101495 NA non-coding downstream 40970 92403831 ~ 92404327 (+)
G101505 NA non-coding downstream 54589 92417450 ~ 92417750 (+)
G100377 NA other upstream 1249136 91109249 ~ 91110862 (+)
G100371 NA other upstream 1277277 91080666 ~ 91082721 (+)
LOC110531710 LOC106592262 other upstream 1476784 90870561 ~ 90896084 (+)
G99880 NA other upstream 1557669 90643871 ~ 90802329 (+)
G101557 NA other downstream 164158 92527019 ~ 92531819 (+)
G101642 LOC106594265 other downstream 504815 92867676 ~ 92872700 (+)
G101737 NA other downstream 653061 93015922 ~ 93016762 (+)
G102505 NA other downstream 1470263 93833124 ~ 93835192 (+)

Expression


Co-expression Network