LOC118966102


Basic Information

Item Value
gene id LOC118966102
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 93046026 ~ 93047232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053333.1
TAGCACAGCTCCTCTCTAAAACCACTCTGATGTTGTTTTctcacactgtctgactgttATATCAGACAGGTAGACAGTTCCCCCTCACACTGTCTGACTGTGTTAtatcagacaggcagacagtgttatatcagacaggtagacagttcccctcacactgtgttatATCAGACAGgtagactgtgttatatcagacaggtagacagttcccctcacactgtgttatatcagacaggtagacagGTAGACTGTGTTAtatcagacaggtagacaggtagactgtgttatatcagacaggtagacaggtagactgtGTTATATCAGACAGGTAGACAGCTCCTCCTCACACTGTGTTATCTCAGACAGGTAGACAGttcccctcacactgtgttatCTCAGACAGGTAGACAGTCTCCTCACACTGTGTTATCTCAGACAGGTAGACTGTGTTATATCAGACAGGTAGACAGCTCCCCTCACACTGTCTGACTGTGTTATATCAGACAGGTAGACTGTGTTATATCAGTCAGGTAGACAGCTCCCCCTCACACTGTGTTATA
>XR_005053332.1
gttATATCAGACAGGTAGACAGTTCCCCCTCACACTGTCTGACTGTGTTAtatcagacaggcagacagtgttatatcagacaggtagactgtgttatatcagacagGTAGACAGTTCCCCTCACACTGCGTTGtatcagacaggtagacaggtagaccgtgttatatcagacaggtagacagGTAGACTGTGTTAtatcagacaggtagacaggtagactgtgttatatcagacaggtagacaggtagactgtGTTATATCAGACAGGTAGACAGCTCCTCCTCACACTGTGTTATCTCAGACAGGTAGACAGttcccctcacactgtgttatCTCAGACAGGTAGACAGTCTCCTCACACTGTGTTATCTCAGACAGGTAGACTGTGTTATATCAGACAGGTAGACAGCTCCCCTCACACTGTCTGACTGTGTTATATCAGACAGGTAGACTGTGTTATATCAGTCAGGTAGACAGCTCCCCCTCACACTGTGTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053333.1 False 560 mRNA 0.45 3 93046026 93047232
XR_005053332.1 True 499 mRNA 0.45 4 93046081 93047232

Neighbor

gene id symbol gene type direction distance location
LOC110533005 clrn3 coding upstream 11559 93027579 ~ 93034467 (+)
LOC118964553 NA coding upstream 683165 92359998 ~ 92362861 (+)
LOC110522569 LOC106613918 coding upstream 963042 92012752 ~ 92084472 (+)
LOC110531613 LOC106577355 coding upstream 1161646 91877562 ~ 91884380 (+)
LOC118966092 NA coding upstream 1208813 91833232 ~ 91837213 (+)
LOC110501964 LOC106589166 coding downstream 374548 93421780 ~ 93475392 (+)
LOC110511695 LOC106577385 coding downstream 675156 93722388 ~ 93770095 (+)
LOC110517068 LOC106577343 coding downstream 734247 93781479 ~ 94002963 (+)
LOC110515218 LOC106591983 coding downstream 963447 94010679 ~ 94040287 (+)
LOC118966112 NA coding downstream 976678 94023910 ~ 94027476 (+)
G101745 NA non-coding upstream 13460 93031478 ~ 93032566 (+)
G101735 NA non-coding upstream 28981 93016590 ~ 93017045 (+)
G101733 NA non-coding upstream 30689 93015009 ~ 93015337 (+)
G101688 NA non-coding upstream 42173 93002843 ~ 93003853 (+)
G101709 NA non-coding upstream 69587 92966487 ~ 92976439 (+)
G101752 NA non-coding downstream 15857 93063089 ~ 93065076 (+)
G101765 NA non-coding downstream 56185 93103417 ~ 93105658 (+)
G101766 NA non-coding downstream 63926 93111158 ~ 93112127 (+)
G101773 NA non-coding downstream 102325 93149557 ~ 93150456 (+)
G101774 NA non-coding downstream 110871 93158103 ~ 93159291 (+)
G101737 NA other upstream 29264 93015922 ~ 93016762 (+)
G101642 LOC106594265 other upstream 173326 92867676 ~ 92872700 (+)
G101557 NA other upstream 514207 92527019 ~ 92531819 (+)
G100377 NA other upstream 1935164 91109249 ~ 91110862 (+)
G102505 NA other downstream 785892 93833124 ~ 93835192 (+)
G102710 NA other downstream 1163817 94211049 ~ 94212908 (+)
G102740 NA other downstream 1198265 94245497 ~ 94247931 (+)
G102769 NA other downstream 1267461 94314693 ~ 94393315 (+)

Expression


Co-expression Network