LOC110531895 (LOC106613909)


Basic Information

Item Value
gene id LOC110531895
gene name LOC106613909
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 94304371 ~ 94318374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989077.1
caatattatcctcagtcattttccatcaaAAAATGTCAGACCCAGGTAGCTTGTCATGGTTGATAGATAACACTTTTTaaagaattcaaaattacaatgcatGTATTTTATAATTTGGTCAGTTATCCATGGATGTGTCGGTTCAGAATTTAGTTTTTGACATGCCTAAGTTTACTAATCTTGCCGATGTTGCAGGAATGTACCAATAAGTGCTGTGACGCGGCCACCTGTAAGTTGACCTGGGGATCGGCCTGCGCTCAGGGAGCCTGCTGCAAGGACTGCAAGATCAGCGTGTCAGGGACACCGTGCAGGGGATCTGTCAACTCATGCGACCTCCCAGAATACTGCAACGGCTCCACCTCCTACTGTCCATCTGACTTCTATATCATGGATGGGCTTCTCTGTGAGAACAACGCGGCGTACTGTTATGAGGGCCGCTGCCAGACCTACGACTACCAATGCAAACATCTTtttgaaacagGTGCAAGCAAAGCAGCAGACATCTGCTTTCAGACGGCTAATCTAAAGGGGGATGCGTTTGGGAACTGTGGCATGACGTCGTCAGGGACCTATGTGAAATGTAGTTTGGCTAATGCCATGTGTGGGAAGGTACAGTGCACTAACGTAAACACCAACAACCCTCCTCCTGGAGGCTCGGTCAGTAACCAGATCATCGATGGTTCTTCGTGTGTCAACGCAGACTTTAACCTGGGCTCTGATGTTCTGGACCCTGCCTATGTCAACCAGGGCAGCCCCTGCACCAAGGGGAAGGCCTGCCTTGACTTCCAGTGTGTGAATGCCTCAGCTCTACTGCCTGTTGACCTCCACTGTGATGCCAACAACACATGTAACAGCCGGGGGGTGTGTAACAACCAGGGCCACTGCCACTGTAATGACGGCTGGGGACCTCCTAACTGTGCCAAGTCAGGGAGAGGGGGCAGTGTGGACAGCGGGCCTGCACAGATAGATTATTCCCTGAGGGACGGCCTGCTGATCTTCTTCCTGCTGGTGGTTCCCATCCTGGTGCTGCTGGTGTTAGTACTGCTCTATGTGTTCAGAAGGGATACCCTGGAAAGATGCCTCAAAGGACCACGCTCCAGACGCTCTAGCCAATGCCTACATATCCACCATCCTCTACCTCAGGACCCAGGTATGGAGAAAACAACAATTGGAACCAACCTCCTGCCTCCCAGCCACCTCTCCCCCAGCAAGGCCCAGGTGTTCCCAAACCCATCCCTCCCAAGCATTAACCCTGACAGACACACCCCTTCGAACATAATGTGGGGCTCTTCCCTCATTCGTTATTGTAAATTTCATATTTGTATTTTACTCATATTTGTATGATTGTTTGTGGATatctaaaaaataataataatttaaaaaacattttattgcAGGAACATGATTTGGTGACAGGGACTTTTTAAGATATTGCTTTTTACATTATTACTACGGAAATGAAGGTAACGCATTTTGTAATAAAAATATACATATTGTTGATATTGTTCAGTTCCAGAAAGGCTCAATTTATTTTATGAGCGGTTTACAAGATCTTTTTTAATATTTAAATGTTACtcataataaaaaatgtatataata
>XM_036989080.1
tcaatattatcctcagtcattttccatcaaAAAATGTCAGACCCAGGTAGCTTGTCATGGTTGATAGATAACACTTTTTaaagaattcaaaattacaatgcatGTATTTTATAATTTGGTCAGTTATCCATGGATGTGTCGGTTCAGAATTTAGTTTTTGACATGCCTAAGTTTACTAATCTTGCCGATGTTGCAGGAATGTACCAATAAGTGCTGTGACGCGGCCACCTGTAAGTTGACCTGGGGATCGGCCTGCGCTCAGGGAGCCTGCTGCAAGGACTGCAAGATCAGCGTGTCAGGGACACCGTGCAGGGGATCTGTCAACTCATGCGACCTCCCAGAATACTGCAACGGCTCCACCTCCTACTGTCCATCTGACTTCTATATCATGGATGGGCTTCTCTGTGAGAACAACGCGGCGTACTGTTATGAGGGCCGCTGCCAGACCTACGACTACCAATGCAAACATCTTtttgaaacagGTGCAAGCAAAGCAGCAGACATCTGCTTTCAGACGGCTAATCTAAAGGGGGATGCGTTTGGGAACTGTGGCATGACGTCGTCAGGGACCTATGTGAAATGTAGTTTGGCTAATGCCATGTGTGGGAAGGTACAGTGCACTAACGTAAACACCAACAACCCTCCTCCTGGAGGCTCGGTCAGTAACCAGATCATCGATGGTTCTTCGTGTGTCAACGCAGACTTTAACCTGGGCTCTGATGTTCTGGACCCTGCCTATGTCAACCAGGGCAGCCCCTGCACCAAGGGGAAGGCCTGCCTTGACTTCCAGTGTGTGAATGCCTCAGCTCTACTGCCTGTTGACCTCCACTGTGATGCCAACAACACATGTAACAGCCGGGGGGTGTGTAACAACCAGGGCCACTGCCACTGTAATGACGGCTGGGGACCTCCTAACTGTGCCAAGTCAGGGAGAGGGGGCAGTGTGGACAGCGGGCCTGCACAGATAGATTATTCCCTGAGGGACGGCCTGCTGATCTTCTTCCTGCTGGTGGTTCCCATCCTGGTGCTGCTGGTGTTAGTACTGCTCTATGTGTTCAGAAGGGATACCCTGGAAAGATGCCTCAAAGGACCACGCTCCAGACGCTCTAGGTCAGGAAACACAGCGAATGGCAATGCCCCGAAACAACCAACTACACAACCTCCAACAACACAGGCCCCACCCCCTCAGCCAATGCCTACATATCCACCATCCTCTACCTCAGGACCCAGGTATGGAGAAAACAACAATTGGAACCAACCTCCTGCCTCCCAGCCACCTCTCCCCCAGCAAGGCCCAGGTGTTCCCAAACCCATCCCTCCCAAGCATTAACCCTGACAGACACACCCCTTCGAACATAATGTGGGGCTCTTCCCTCATTCGTTATTGTAAATTTCATATTTGTATTTTACTCATATTTGTATGATTGTTTGTGGATatctaaaaaataataataatttaaaaaacattttattgcAGGAACATGATTTGGTGACAGGGACTTTTTAAGATATTGCTTTTTACATTATTACTACGGAAATGAAGGTAACGCATTTTGTAATAAAAATATACATATTGTTGATATTGTTCAGTTCCAGAAAGGCTCAATTTATTTTATGAGCGGTTTACAAGATCTTTTTTAATATTTAAATGTTACtcataataaaaaatgtatataata
>TU115111
ctaGGACCTTTTCCAGTATGTGACTTATTAATCAGTTTACATGTTGTAGTAATTCTGCTCTCTTCATCTGTTTCCAGCCAATGCCTACATATCCACCATCCTCTACCTCAGGACCCAGGTATGGAGAAAACAACAATTGGAACCAACCTCCTGCCTCCCAGCCACCTCTCCCCCAGCAAGGCCCAGGTGTTCCCAAACCCATCCCTCCCAAGCATTAACCCTGACAGACACACCCCTTCGAACATAATGTGGGGCTCTTCCCTCATTCGTTATTGTAAATTTCATATTTGTATTTTACTCATATTTGTATGATTGTTTGTGGATatctaaaaaataataataatttaaaaaacattttattgcAGGAACATGATTTGGTGACAGGGACTTTTTAAGATATTGCT
>TU115108
TCGGTTCAGAATTTAGTTTTTGACATGCCTAAGTTTACTAATCTTGCCGATGTTGCAGGAATGTACCAATAAGTGCTGTGACGCGGCCACCTGTAAGTTGACCTGGGGATCGGCCTGCGCTCAGGGAGCCTGCTGCAAGGACTGCAAGATCAGCGTGTCAGGGACACCGTGCAGGGGATCTGTCAACTCATGCGACCTCCCAGAATACTGCAACGGCTCCACCTCCTACTGTCCATCTGACTTCTATATCATGGATGGGCTTCTCTGTGAGAACAACGCGGCGTACTGTTATGAGGGCCGCTGCCAGACCTACGACTACCAATGCAAACATCTTtttgaaacagGTGCAAGCAAAGCAGCAGACATCTGCTTTCAGACGGCTAATCTAAAGGGGGATGCGTTTGGGAACTGTGGCATGACGTCGTCAGGGACCTATGTGAAATGTAGTTTGGCTAATGCCATGTGTGGGAAGGTACAGTGCACTAACGTAAACACCAACAACCCTCCTCCTGGAGGCTCGGTCAGTAACCAGATCATCGATGGTTCTTCGTGTGTCAACGCAGACTTTAACCTGGGCTCTGATGTTCTGGACCCTGCCTATGTCAACCAGGGCAGCCCCTGCACCAAGGGGAAGGCCTGCCTTGACTTCCAGTGTGTGAATGCCTCAGCTCTACTGCCTGTTGACCTCCACTGTGATGCCAACAACACATGTAACAGCCGGGGGGTGTGTAACAACCAGGGCCACTGCCACTGTAATGACGGCTGGGGACCTCCTAACTGTGCCAAGTCAGGGAGAGGGGGCAGTGTGGACAGCGGGCCTGCACAGATAGATTATTCCCTGAGGGACGGCCTGCTGATCTTCTTCCTGCTGGTGGTTCCCATCCTGGTGCTGCTGGTGTTAGTACTGCTCTATGTGTTCAGAAGGGATACCCTGGAAAGATGCCTCAAAGGACCACGCTCCAGACGCTCTAGGTCAGGAAACACAGCGAATGGCAATGCCCCGAAACAACCAACTACACAACCT

Function

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 9-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989077.1 False 1599 mRNA 0.46 9 94304371 94318373
XM_036989080.1 False 1679 mRNA 0.46 10 94304371 94318374
TU115111 False 404 lncRNA 0.40 2 94304534 94305059
TU115108 True 1024 TUCP 0.41 8 94310050 94318236
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110531859 LOC106577432 coding downstream 9717 94283183 ~ 94294654 (-)
LOC110531877 LOC106577431 coding downstream 30635 94247401 ~ 94273736 (-)
LOC110514051 LOC106575477 coding downstream 71660 94227799 ~ 94232711 (-)
LOC118966114 LOC106575478 coding downstream 86464 94212534 ~ 94217907 (-)
LOC110515886 bccip coding downstream 250214 94040240 ~ 94054157 (-)
LOC118966130 LOC106577431 coding upstream 5028 94323402 ~ 94341808 (-)
LOC118966131 NA coding upstream 31904 94350278 ~ 94357842 (-)
LOC110531886 LOC106577432 coding upstream 45013 94362379 ~ 94370027 (-)
LOC110533036 LOC106613909 coding upstream 62249 94380623 ~ 94421885 (-)
LOC118966144 LOC106577436 coding upstream 1316787 95635147 ~ 95672256 (-)
G102838 NA non-coding downstream 61966 94242051 ~ 94242405 (-)
G102831 NA non-coding downstream 68042 94236074 ~ 94236329 (-)
G102836 NA non-coding downstream 68910 94235222 ~ 94235461 (-)
G102826 NA non-coding downstream 77799 94226344 ~ 94226572 (-)
G102861 NA non-coding upstream 11629 94330003 ~ 94330916 (-)
G102880 NA non-coding upstream 85133 94403507 ~ 94405457 (-)
G102896 NA non-coding upstream 121335 94439709 ~ 94439919 (-)
G102898 NA non-coding upstream 127894 94446268 ~ 94446536 (-)
G102679 NA other downstream 188683 94110119 ~ 94115688 (-)
G102641 LOC106593079 other downstream 281068 94023009 ~ 94023303 (-)
LOC110513667 LOC106592544 other downstream 703751 93182405 ~ 93710353 (-)
G102290 NA other downstream 964727 93301985 ~ 93339644 (-)
G102217 NA other downstream 1251522 93052277 ~ 93052849 (-)
G102887 NA other upstream 104434 94422808 ~ 94423087 (-)
G103509 NA other upstream 930718 95249092 ~ 95327889 (-)
G103698 LOC106560310 other upstream 1206018 95524392 ~ 95530959 (-)
G102858 NA non-coding upstream 9822 94314881 ~ 94393134 (-)
LOC110531895 LOC106613909 other upstream 4991 94304371 ~ 94318374 (-)

Expression

LOC110531895(LOC106613909) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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LOC110531895(LOC106613909) Expression in each Bioproject

Bar chart with 20 bars.
LOC110531895(LOC106613909) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network