G17



Basic Information


Item Value
gene id G17
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46094 ~ 51278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU42
gcagagagtctggcagaatggagaagcaaagagtctggcagaatggagaagcagagtgtctggcagaatggagaagcagagagtggcagaatggagaagcagagagtctggcagaatggagtggcagagagtcaggcagaatggagtaacagaatggagtggcagagagtcaggcagaatggagtaacagaatggagtggcagagagtcaggcagaatggagtaacagaatggagtggcagatagtcaggcagactggagtggcatagagtcaggcagaatggagtaacaaaatgaagtggcagagagtcaggcagaatggcgtaacagaatagagtggcagagagtcaggcagaatggagtaacagaatggagtggcagagagtcaggcagaatggagtaacagaatggagtggcagagagtcaggcagaatggagtggcagagagtcaggcagaatggagtaacagaatgtagtggcagagagtcaggcagaatgtagtggcagagagtcaggcagaatggagtggcagagagtcaggcataatggagtggcagagagtcaggcagaatggagtggcagagagtctggcagaatggagtagcagagagtctg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU42 True 614 lncRNA 0.49 2 46094 51278

Neighbor


gene id symbol gene type direction distance location
LOC110532027 tomm70 coding downstream 332929 384207 ~ 421233 (+)
tbc1d23 tbc1d23 coding downstream 388687 439965 ~ 497128 (+)
nit2 nit2 coding downstream 550825 602103 ~ 617595 (+)
slc9a7 slc9a7 coding downstream 730562 781840 ~ 1244153 (+)
tubgcp5 tubgcp5 coding downstream 1038118 1089396 ~ 1133908 (+)
G6 LOC106574160 non-coding upstream 6708 35450 ~ 39386 (+)
G13 NA non-coding upstream 18403 27301 ~ 27691 (+)
G10 NA non-coding upstream 20897 24970 ~ 25197 (+)
G25 NA non-coding downstream 4506 55784 ~ 78300 (+)
G66 NA non-coding downstream 100587 151865 ~ 158760 (+)
G72 NA non-coding downstream 114341 165619 ~ 165880 (+)
G160 NA non-coding downstream 256273 307551 ~ 307763 (+)
G166 NA non-coding downstream 266769 318047 ~ 319974 (+)
G19 NA other downstream 1433 52711 ~ 72299 (+)
G26 NA other downstream 5277 56555 ~ 93718 (+)
G50 NA other downstream 61681 112959 ~ 120307 (+)
G51 NA other downstream 69188 120466 ~ 130263 (+)

Expression



Co-expression Network